genetic relationships

Association of SSR markers with contents of fatty acids in olive oil and genetic diversity analysis of an olive core collection

M. Ipek, Ipek, A., Seker, M., and Gul, M. K., Association of SSR markers with contents of fatty acids in olive oil and genetic diversity analysis of an olive core collection, vol. 14, pp. 2241-2252, 2015.

The purpose of this research was to characterize an olive core collection using some agronomic characters and simple sequence repeat (SSR) markers and to determine SSR markers associated with the content of fatty acids in olive oil. SSR marker analysis demonstrated the presence of a high amount of genetic variation between the olive cultivars analyzed. A UPGMA dendrogram demonstrated that olive cultivars did not cluster on the basis of their geographic origin. Fatty acid components of olive oil in these cultivars were determined.

Identification of molecular markers associated with fruit traits in olive and assessment of olive core collection with AFLP markers and fruit traits

M. Ipek, Seker, M., Ipek, A., and Gul, M. K., Identification of molecular markers associated with fruit traits in olive and assessment of olive core collection with AFLP markers and fruit traits, vol. 14, pp. 2762-2774, 2015.

The purpose of this study was to characterize olive core collection with amplified fragment length polymorphism (AFLP) markers and fruit traits and to determine AFLP markers significantly associated with these fruit characters in olive. A total of 168 polymorphic AFLP markers generated by five primer combinations and nine fruit traits were used to characterize relationships between 18 olive cultivars. Although all olive cultivars were discriminated from each other by either AFLP markers (

tRNALeu intron (UAA) of Ficus carica L.: genetic diversity and evolutionary patterns

G. Baraket, Abdelkrim, A. B., and Salhi-Hannachi, A., tRNALeu intron (UAA) of Ficus carica L.: genetic diversity and evolutionary patterns, vol. 14, pp. 3817-3832, 2015.

Cytoplasmic chloroplast DNA was explored to establish genetic relationships among Ficus carica cultivars and elucidate the molecular evolution of the species. The results suggest the occurrence of haplotype and nucleotide diversity. Conserved group I intron sequence motifs were detected and showed a common secondary structure, despite the presence of some mutations on their sequences. The neighbor-joining dendrogram showed a continuous diversity that characterizes local resources.

Assessing the genetic relationships of Curcuma alismatifolia varieties using simple sequence repeat markers

S. Taheri, Abdullah, T. L., Abdullah, N. A. P., Ahmad, Z., Karimi, E., and Shabanimofrad, M. R., Assessing the genetic relationships of Curcuma alismatifolia varieties using simple sequence repeat markers, vol. 13, pp. 7339-7346, 2014.

The genus Curcuma is a member of the ginger family (Zingiberaceae) that has recently become popular for use as flowering pot plants, both indoors and as patio and landscape plants. We used PCR-based molecular markers (SSRs) to elucidate genetic variation and relationships between five varieties of Curcuma (Curcuma alismatifolia) cultivated in Malaysia. Of the primers tested, 8 (of 17) SSR primers were selected for their reproducibility and high rates of polymorphism.

Genetic relationships among and within wild and cultivated olives based on RAPDs

M. Sesli and Yegenoglu, E. D., Genetic relationships among and within wild and cultivated olives based on RAPDs, vol. 9, pp. 1550-1556, 2010.

We examined genetic relationships among wild and cultivated olives, which is a very important crop in the economy of the Aegean region. We used RAPD analysis to evaluate relationships among and within 22 olive subspecies from Manisa, Mugla and Izmir provinces in Turkey. Twelve of the subspecies were wild and 10 were cultivated olives. Fifty-two primers were used (OP-Q 1-20, OP-I 1-20, OP-F 14-15-16-17, and OP-K 1-8) and 49 polymorphic bands were selected and used for analysis.

Genetic relationships of the Japanese persimmon Diospyros kaki (Ebenaceae) and related species revealed by SSR analysis

D. L. Guo and Luo, Z. R., Genetic relationships of the Japanese persimmon Diospyros kaki (Ebenaceae) and related species revealed by SSR analysis, vol. 10, pp. 1060-1068, 2011.

Simple sequence repeat (SSR) molecular markers based on 18 primers were employed to study the genetic relationship of Japanese persimmon (Diospyros kaki) specimens. Two hundred and sixty-two bands were detected in 30 Japanese persimmon samples, including 14 Japanese and 10 Chinese genotypes of Japanese persimmon (Diospyros kaki) and six related species, D. lotus, D. glaucifolia, D. oleifera, D. rhombifolia, D. virginiana, and Jinzaoshi (unclassified - previously indicated to be D. kaki).

Genetic variability of Brazilian Indian landraces of Arachis hypogaea L.

F. O. Freitas, Moretzsohn, M. C., and Valls, J. F. M., Genetic variability of Brazilian Indian landraces of Arachis hypogaea L., vol. 6, pp. 675-684, 2007.

The Kayabi Indians who inhabit the Xingu Indigenous Park, located in West Central Brazil, have grown and managed peanuts for a long time. A great number of landraces are being maintained by these tribes and some of this germplasm has morphological traits that exceed the variation described in the taxonomic literature. Here, we analyzed the genetic variability of these landraces using a set of microsatellite markers. The analysis showed that, in general, the indigenous samples grouped according to the villages where they were collected.

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