G.R. Fernandes, M.A. Mudado, J.M. OrtegaPublished: September 30, 2008Genet. Mol. Res. 7 (3) : 948-957DOI: https://doi.org/10.4238/vol7-3x-meeting011 Cite this Article:G.R. Fernandes, M.A. Mudado, J.M. Ortega (2008). Testing the performance of automated annotation of ESTs with the Kegg Orthology (KO) database demonstrates lack of completeness of clusters. Genet. Mol. Res. 7(3): 948-957. https://doi.org/10.4238/vol7-3x-meeting011 About the AuthorsG.R. Fernandes, […]
Heteroduplex formation and S1 digestion for mapping alternative splicing sites
E.N. Ferreira, M.C.R. Rangel, P.B. Pineda, D.O. Vidal, A.A. Camargo, S.J. Souza, D.M. CarraroPublished: September 30, 2008Genet. Mol. Res. 7 (3) : 958-969DOI: https://doi.org/10.4238/vol7-3x-meeting012 Cite this Article:E.N. Ferreira, M.C.R. Rangel, P.B. Pineda, D.O. Vidal, A.A. Camargo, S.J. Souza, D.M. Carraro (2008). Heteroduplex formation and S1 digestion for mapping alternative splicing sites. Genet. Mol. Res. 7(3): […]
Routine libraries for pattern recognition in quasispec
E.A. Marucci, G.F.D. Zafalon, A.C.G. Jardim, L.H.T. Yamasaki, C. Bittar, P. Rahal, J.M. MachadoPublished: September 30, 2008Genet. Mol. Res. 7 (3) : 970-981DOI: https://doi.org/10.4238/vol7-3x-meeting013 Cite this Article:E.A. Marucci, G.F.D. Zafalon, A.C.G. Jardim, L.H.T. Yamasaki, C. Bittar, P. Rahal, J.M. Machado (2008). Routine libraries for pattern recognition in quasispecies. Genet. Mol. Res. 7(3): 970-981. https://doi.org/10.4238/vol7-3x-meeting013 About […]
ChromaPipe: a pipeline for analysis, quality control and management for a DNA sequencing facility
T.D. Otto, E.A. Vasconcellos, L.H.F. Gomes, A.S. Moreira, W.M. Degrave, L. Mendonça-Lima, M.Alves-FerreiraPublished: September 23, 2008Genet. Mol. Res. 7 (3) : 861-871DOI: https://doi.org/10.4238/vol7-3x-meeting04 Cite this Article:T.D. Otto, E.A. Vasconcellos, L.H.F. Gomes, A.S. Moreira, W.M. Degrave, L. Mendonça-Lima, M. Alves-Ferreira (2008). ChromaPipe: a pipeline for analysis, quality control and management for a DNA sequencing facility. Genet. […]
In silico reconstruction of the amino acid metabolic pathways of Trypanosoma cruzi
A.C.R. Guimarães, T.D. Otto, M. Alves-Ferreira, A.B. Miranda, W.M. DegravePublished: September 23, 2008Genet. Mol. Res. 7 (3) : 872-882DOI: https://doi.org/10.4238/vol7-3x-meeting05 Cite this ArticleA.C.R. Guimarães, T.D. Otto, M. Alves-Ferreira, A.B. Miranda, W.M. Degrave (2008). In silico reconstruction of the amino acid metabolic pathways of Trypanosoma cruzi. Genet. Mol. Res. 7(3): 872-882. https://doi.org/10.4238/vol7-3x-meeting05 About the AuthorsA.C.R. Guimarães, […]
A simple and efficient method for predicting protein-protein interaction sites
R.H. Higa, C.L. TozziPublished: September 23, 2008Genet. Mol. Res. 7 (3) : 898-909DOI: https://doi.org/10.4238/vol7-3x-meeting07 Cite this Article:R.H. Higa, C.L. Tozzi (2008). A simple and efficient method for predicting protein-protein interaction sites. Genet. Mol. Res. 7(3): 898-909. https://doi.org/10.4238/vol7-3x-meeting07 About the AuthorsR.H. Higa, C.L. Tozzi Corresponding AuthorR.H. HigaEmail: roberto@cnptia.embrapa.br ABSTRACT Computational methods for predicting protein-protein interaction sites […]
An algorithm to infer similarity among celltypes and organisms by examining the mostexpressed sequences
S.A.P. Pinto, J.M. OrtegaPublished September 30, 2008Genet. Mol. Res. 7 (3): 933-947 (2008) About the AuthorsS.A.P. Pinto, J.M. Ortega Corresponding authorJ.M. Ortega Email: miguel@icb.ufmg.br AbstractFollowing sequence alignment, clustering algorithms are among the most utilized techniques in gene expression data analysis. Clustering gene expression patterns allows researchers to determine which gene expression patterns are alike and most […]
ChromaPipe: a pipeline for analysis,quality control and management for a DNAsequencing facility
T.D. Otto, E.A. Vasconcellos, L.H.F. Gomes, A.S. Moreira1, W.M. Degrave1, L.Mendonça-LimaM. Alves-FerreiraPublished September 23, 2008Genet. Mol. Res. 7 (3): 861-871 (2008) About the AuthorsT.D. Otto, E.A. Vasconcellos, L.H.F. Gomes, A.S. Moreira1, W.M. Degrave1, L.Mendonça-LimaM. Alves-Ferreira Corresponding authorT.D. OttoEmail: otto@ioc.fiocruz.br AbstractOptimizing and monitoring the data flow in highthroughput sequencing facilities is important for data input and […]
The full Bayesian significance test for mixturemodels: results in gene expression clustering
M.S. Lauretto, C.A.B. Pereira, J.M. Stern Published September 23, 2008 Genet. Mol. Res. 7 (3): 883-897 (2008) About the AuthorsM.S. Lauretto, C.A.B. Pereira, J.M. Stern Corresponding authorM.S. LaurettoEmail: lauretto@ime.usp.br ABSTRACTGene clustering is a useful exploratory technique to group together genes with similar expression levels under distinct cell cycle phases or distinct conditions. It helps the biologist to […]
Essential amino acid usage and evolutionary nutrigenomics of eukaryotes – insights into the differential usage of amino acids in protein domains and extra-domains
L. Santana-Santos, F. Prosdocimi, J.M. OrtegaPublished: September 16, 2008Genet. Mol. Res. 7 (3) : 839-852DOI: https://doi.org/10.4238/vol7-3x-meeting002 Cite this Article:L. Santana-Santos, F. Prosdocimi, J.M. Ortega (2008). Essential amino acid usage and evolutionary nutrigenomics of eukaryotes – insights into the differential usage of amino acids in protein domains and extra-domains. Genet. Mol. Res. 7(3): 839-852. https://doi.org/10.4238/vol7-3x-meeting002 About […]