Month: September 2008

An algorithm to infer similarity among celltypes and organisms by examining the mostexpressed sequences

S.A.P. Pinto, J.M. OrtegaPublished September 30, 2008Genet. Mol. Res. 7 (3): 933-947 (2008) About the AuthorsS.A.P. Pinto, J.M. Ortega Corresponding authorJ.M. Ortega Email: miguel@icb.ufmg.br AbstractFollowing sequence alignment, clustering algorithms are among the most utilized techniques in gene expression data analysis. Clustering gene expression patterns allows researchers to determine which gene expression patterns are alike and most […]

ChromaPipe: a pipeline for analysis,quality control and management for a DNAsequencing facility

T.D. Otto, E.A. Vasconcellos, L.H.F. Gomes, A.S. Moreira1, W.M. Degrave1, L.Mendonça-LimaM. Alves-FerreiraPublished September 23, 2008Genet. Mol. Res. 7 (3): 861-871 (2008) About the AuthorsT.D. Otto, E.A. Vasconcellos, L.H.F. Gomes, A.S. Moreira1, W.M. Degrave1, L.Mendonça-LimaM. Alves-Ferreira Corresponding authorT.D. OttoEmail: otto@ioc.fiocruz.br  AbstractOptimizing and monitoring the data flow in highthroughput sequencing facilities is important for data input and […]

The full Bayesian significance test for mixturemodels: results in gene expression clustering

M.S. Lauretto, C.A.B. Pereira, J.M. Stern Published September 23, 2008 Genet. Mol. Res. 7 (3): 883-897 (2008) About the AuthorsM.S. Lauretto, C.A.B. Pereira, J.M. Stern  Corresponding authorM.S. LaurettoEmail: lauretto@ime.usp.br ABSTRACTGene clustering is a useful exploratory technique to group together genes with similar expression levels under distinct cell cycle phases or distinct conditions. It helps the biologist to […]

Essential amino acid usage and evolutionary nutrigenomics of eukaryotes – insights into the differential usage of amino acids in protein domains and extra-domains

L. Santana-Santos, F. Prosdocimi, J.M. OrtegaPublished: September 16, 2008Genet. Mol. Res. 7 (3) : 839-852DOI: https://doi.org/10.4238/vol7-3x-meeting002 Cite this Article:L. Santana-Santos, F. Prosdocimi, J.M. Ortega (2008). Essential amino acid usage and evolutionary nutrigenomics of eukaryotes – insights into the differential usage of amino acids in protein domains and extra-domains. Genet. Mol. Res. 7(3): 839-852. https://doi.org/10.4238/vol7-3x-meeting002 About […]

DNATagger, colors for codons

N.M. Scherer, D.M. BassoPublished: September 16, 2008Genet. Mol. Res. 7 (3) : 853-860DOI: https://doi.org/10.4238/vol7-3x-meeting003 Cite this Article:N.M. Scherer, D.M. Basso (2008). DNATagger, colors for codons. Genet. Mol. Res. 7(3): 853-860. https://doi.org/10.4238/vol7-3x-meeting003 About the AuthorsN.M. Scherer, D.M. Basso Corresponding Author    N.M. SchererEmail: scherer@cs.uni-duesseldorf.de ABSTRACT DNATagger is a web-based tool for coloring and editing DNA, RNA […]

Anthranilate synthase subunit organization in Chromobacterium violaceum

C.A. Carminatti, I.L. Oliveira, D.O.S. Recouvreux, R.V. Antônio, L.M. PortoPublished: September 16, 2008Genet. Mol. Res. 7 (3) : 830-838DOI: https://doi.org/10.4238/vol7-3x-meeting001 Cite this Article:C.A. Carminatti, I.L. Oliveira, D.O.S. Recouvreux, R.V. Antônio, L.M. Porto (2008). Anthranilate synthase subunit organization in Chromobacterium violaceum. Genet. Mol. Res. 7(3): 830-838. https://doi.org/10.4238/vol7-3x-meeting00 About the AuthorsC.A. Carminatti, I.L. Oliveira, D.O.S. Recouvreux, R.V. […]

X-Meeting – International Conference of the Brazilian Association for Bioinformatics and Computational Biology – AB3CSão Paulo, SP, Brazil, November 1 to 3, 2007

Published: September 15, 2008 Genet. Mol. Res. 7 (3) : 830-981 ABSTRACT Guest EditorsRoberto Marcondes Cesar Jr., USPEduardo Moraes Rego Reis, USPAssociated Editor from GMRVasco Azevedo, UFMG Genet. Mol. Res. 7 (3): 830-981 (2008) PresentationGenet. Mol. Res. 7 (3) 2008 Guest EditorsRoberto Marcondes Cesar Jr., USPEduardo Moraes Rego Reis, USPAssociated Editor from GMRVasco Azevedo, UFMG Genet. Mol. […]

Isoenzyme electrophoretic patterns in discus fish (Symphysodon aequifasciatus Pellegrin, 1904 and Symphysodon discus Heckel, 1840) from the Central Amazon

C.A. Silva, R.C.A. Lima, A.S. TeixeiraPublished: September 09, 2008Genet. Mol. Res. 7 (3) : 791-805DOI: https://doi.org/10.4238/vol7-3gmr450 Cite this Article:C.A. Silva, R.C.A. Lima, A.S. Teixeira (2008). Isoenzyme electrophoretic patterns in discus fish (Symphysodon aequifasciatus Pellegrin, 1904 and Symphysodon discus Heckel, 1840) from the Central Amazon. Genet. Mol. Res. 7(3): 791-805. https://doi.org/10.4238/vol7-3gmr450 About the AuthorsC.A. Silva, R.C.A. […]

Effects of immature cashew nut-shell liquid (Anacardium occidentale) against oxidative damage in Saccharomyces cerevisiae and inhibition of acetylcholinesterase activity

S.G. De Lima, C.M. Feitosa, A.M.G.L. Citó, J.M. Moita Neto, J.A.D. Lopes, A.S. Leite, M.C. Brito, S.M.M. Dantas, A.A.C. Melo Cavalcante.Published: September 09, 2008Genet. Mol. Res. 7 (3) : 806-818DOI: https://doi.org/10.4238/vol7-3gmr473 Cite this Article:S.G. De Lima, C.M. Feitosa, A.M.G.L. Citó, J.M.Moita Neto, J.A.D. Lopes, A.S. Leite, M.C. Brito, S.M.M. Dantas, A.A.C.Melo Cavalcante (2008). Effects of […]

Population genetic structure of the blue-fronted Amazon (Amazona aestiva, Psittacidae: Aves) based on nuclear microsatellite loci: implications for conservation

K.C.E. Leite, G.H.F. Seixas, I. Berkunsky, R.G. Collevatti, R. CaparrozPublished: September 09, 2008Genet. Mol. Res. 7 (3) : 819-829DOI: https://doi.org/10.4238/vol7-3gmr474 Cite this Article:K.C.E. Leite, G.H.F. Seixas, I. Berkunsky, R.G. Collevatti, R. Caparroz (2008). Population genetic structure of the blue-fronted Amazon (Amazona aestiva, Psittacidae: Aves) based on nuclear microsatellite loci: implications for conservation. Genet. Mol. Res. […]

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