Research Article

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Isoëtes sinensis is a critically endangered quillwort. To facilitate studies on the conservation genetics of this species, we developed expressed sequence tag-simple sequence repeat (EST-SSR) markers. A total of 50,063 unigenes were predicted by transcriptome sequencing, 5294 (10.6%) of which significantly matched 3011 Gene Ontology annotations and 2363 were assigned to Kyoto ... more

A.W. Gichira; Z.C. Long; Q.F. Wang; J.M. Chen; K. Liao; A.W. Gichira; Z.C. Long; Q.F. Wang; J.M. Chen; K. Liao
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Comparative transcriptome; De novo assembly; Illumina sequencing; Lymph organ; Procambarus clarkii; White spot syndrome virus

The red swamp crayfish (Procambarus clarkii) is one of the most economically important farmed aquatic species in China. Compared with its relatively well-known antibacterial and antifungal mechanisms, the antiviral mechanism is still unclear. We used Illumina-based RNA sequencing and bioinformatic technology to obtain high-quality sequence reads from the ... more

Z.Q. Du; Z.Q. Du
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Brazilian rice cultivars; differential gene expression; Functional annotation; Water deficit

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R.D.D. Silveira; F.R.M. Abreu; S. Mamidi; P.E. McClean; R.P. Vianello; A.C. Lanna; N.P. Carneiro; C. Brondani
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ASB15 gene; Chicken; Growth and carcass traits; Single nucleotide polymorphism

ASB15 is a member of the ankyrin repeat and suppressor of cytokine signaling box family, and is predominantly expressed in skeletal muscle. In the present study, an F2 resource population of Gushi chickens crossed with Anka broilers was used to investigate the genetic effects of the chicken ASB15 gene. Two single nucleotide polymorphisms (SNPs) (rs315759231 A>G and ... more

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We assessed the role of single nucleotide polymorphisms (SNPs) in ERCC1 and ERCC2 genes in the clinical outcomes for osteosarcoma patients receiving cisplatin-based treatment. A perspective study was conducted on 260 patients with osteosarcoma during 2010 and 2011. A polymerase chain reaction restriction fragment length polymorphism (PCR-RFLP) assay was used to assess ... more

Q. Zhang; L.Y. Lv; B.J. Li; J. Zhang; F. Wei
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Cardiac troponin T type-2 gene; Dilated cardiomyopathy; Gene mutation; Nuclear lamina protein gene; Single nucleotide polymorphism; Tropomyosin gene

Dilated cardiomyopathy (DCM) is a myocardial disease with a high mortality rate. Approximately 40 genes have been found to be associated with DCM to date. Non-familial DCM can also be caused by gene mutations, suggesting that genetic factors were involved in the pathogenesis of DCM; therefore genetic testing is beneficial for the early diagnosis of DCM, which can facilitate the ... more

Y.D. Li; Y.T. Ji; X.H. Zhou; H.L. Li; H.T. Zhang; Y. Zhang; J.X. Li; Q. Xing; J.H. Zhang; Y.F. Hong; B.P. Tang
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3'-UTR; Coronary artery disease; Gene; MEF2A; Single nucleotide polymorphism

Association of variants in the myocyte enhancer factor 2A (MEF2A) gene and the risk of coronary artery disease (CAD) has drawn much attention but remains controversial. We hypothesized that the 3'-untranslated region (3'-UTR) of this gene could harbor functionally relevant nucleotide changes. Here, we assessed the association between single nucleotide polymorphisms (SNPs) in the ... more

X.C. Huang; W. Wang
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The aim of this study was to determine the relationship between polymorphisms in the IL-28B and IL-28R genes and lower urinary tract symptoms (LUTS) in Chinese patients. Genomic DNA was extracted from 553 whole blood samples from 233 patients with LUTS resulted from benign prostatic hyperplasia and 320 control subjects. The IL-28B rs12979860 and rs8099917, and IL-28Rα rs10903035 and ... more

L. .Xiao; L.B. Gao; Q. Wei
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Han people; Ischemic stroke; Mongol; Phosphodiesterase 4D gene; Single nucleotide polymorphism

We investigated single nucleotide polymorphisms (SNP) at 87 sites of the phosphodiesterase 4D (PDE4D) gene in Mongol and Han patients with ischemic stroke in Inner Mongolia. SNPs in 226 patients with ischemic stroke (case group, 110 Mongol patients, 116 Han patients) and 220 patients without neurological disease (control group, 102 Mongol patients, 118 Han patients) were detected ... more

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Gout; Metabolic indices; Single nucleotide polymorphism; SLC2A9; ZNF518B

Current evidence suggests that heredity and metabolic syndrome contribute to gout progression. SLC2A9 and ZNF518B may play a role in gout progression in different populations, but no studies have focused on the Tibetan Chinese population. In this study, we determined whether variations in these 2 genes were correlated with gout-related indices in Chinese-Tibetan gout ... more

X.Y. Zhang; T.T. Geng; L.J. Liu; D.Y. Yuan; T. Feng; L.L. Kang; T.B. Jin; C. Chen

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