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Conservation; Microsatellite; Population genetics; Pteroceltis tatarinowii

Pteroceltis tatarinowii (Ulmaceae) is a scientifically and economically important temperate deciduous tree that is endemic to China. In the present study, 12 P. tatarinowii polymorphic microsatellite loci were developed using the tailed primer-M13-simple sequence repeats (TP-M13-SSR) biotin-capture method. The number of alleles per locus ranged from 2 to 10, with an ... more

X.H. Li; X.P. Zhang; K. Liu; H.J. Liu; J.W. Shao
Martes flavigula; Microsatellite; Next-generation sequencing; Population genetics

The yellow-throated marten (Martes flavigula Boddaert 1785) is a medium-sized carnivore and a top predator in South Korea that is distributed throughout Western and Southeast Asia and Siberia in a wide range of habitats. In this study, we developed a panel of polymorphic microsatellite markers for M. flavigula by Illumina next-generation sequencing for ... more

M.Yeong Lee; H.Chang Moon; H.Sook Jeon; E.Geun Song; D. Woo; H.B. Park; T.Young Choi; K.Yeon Eo; Y. Hyun; K. Lee; Y.Seok Park; J.Young Moon; H.Jin Han; J. An
Cold tolerance; Low temperature; Microsatellite; Oreochromis niloticus

Tilapia is an important fish cultured in tropical and subtropical areas. Cold sensitivity limits the expansion of tilapia culture into colder regions of the world, and mass mortalities of cultured tilapia have been reported due to severe cold currents in winter. Since the late 1990s, several strains of Nile tilapia have been domesticated to improve the ability to adapt to low temperatures ... more

H.P. Zhu; Z.G. Liu; M.X. Lu; F.Y. Gao; X.L. Ke; Z.H. Huang
Branchiostoma belcheri Gray; Conservation; FIASCO; Microsatellite

Branchiostoma belcheri Gray is a second-class, nationally protected protochordate in China. We developed 10 novel polymorphic sites in B. belcheri, which were examined using a population of 30 wild individuals from Xiamen, China. The polymorphism information content ranged between 0.141 and 0.681, and the number of alleles varied from 2 to 5. The expected and observed ... more

Z.B. Li; Y.S. Huang; J.B. Shangguan; Y.F. Ning; Y. Yi; G. Dai
Genetic distance; Genetic diversity; Genetic similarity; Genetic structure; Microsatellite; Siniperca chuatsi

In order to provide genetic information for the selective breeding of Siniperca chuatsi, 14 microsatellite DNA loci were used to evaluate the genetic diversity and structure of four farmed populations and one wild population in China. The four cultivated populations were Foshan (FS), Jiangmen (JM), Nanjing (NJ), and Hongze Lake (HZL), and the wild population was collected from the ... more

C.F. Sun; X. Ye; Y.Y. Tian; J.J. Dong
Association analysis; Genetic diversity; Growth traits; Mandarin fish; Microsatellite

Mandarin fish (Siniperca chuatsi) is a traditionally cultured freshwater fish with high commercial value in China. To facilitate marker-assisted selection for genetic improvement of this species, 100 microsatellite markers identified in previous studies were characterized in the 25 largest and 25 smallest individuals. Twenty polymorphic loci were used to genotype 200 individuals ... more

T.L. Yi; L. Fang; X.F. Liang; L.F. Sun; J. Li; X.N. Luo; W.J. Guo; Y.Q. Dou; J. Sun
Acipenser schrenckii; Genetic diversity; Microsatellite; Next-generation sequencing; Polymorphism

Anthropogenic activities have seriously impacted wild resources of the Amur sturgeon, Acipenser schrenckii, and more infor­mation on local and regional population genetic structure is required to aid the conservation of this species. In this study, we report the develop­ment of 12 novel polymorphic microsatellite loci using next-generation sequencing technology, and the genotyping of ... more

L.M. Li; L. Wei; H.Y. Jiang; Y. Zhang; X.J. Zhang; L.H. Yuan; J.P. Chen
Atrina pectinata; Fragment length polymorphism; Genetic markers; Microsatellite; Sequence containing repeats

The pen shell, Atrina pectinata, is an economically valuable species that is widely distributed along the coastal waters of temperate and tropical areas, mainly growing in the Indian and Pacific Oceans. Eight novel microsatellite loci from the genome of A. pectinata were developed using fast isolation by amplified fragment length polymorphism of sequence containing ... more

Y.F. Ning; Z.B. Li; J.B. Shangguan; Y.S. Huang; P.D. Jiang; A.L. Xu; Y. Yuan
Genetic diversity; Growth traits; Mandarin fish; Microsatellite

The mandarin fish (Siniperca chuatsi) is a traditionally cultured freshwater fish with high commercial value in China. To facilitate marker-assisted selection in genetic improvement of this species, 120 microsatellite markers from the literature were characterized in the 25 largest and 25 smallest individuals. Eighteen polymorphic loci were then used to genotype 200 individuals, ... more

L.F. Sun; J. Li; X.F. Liang; T.L. Yi; L. Fang; J. Sun; Y.H. He; X.N. Luo; Y.Q. Dou; M. Yang
Broiler chicken; Gallus gallus; Genotyping; Heritability; Microsatellite; Quantitative trait loci mapping

Selection among broilers for performance traits is resulting in locomotion problems and bone disorders, once skeletal structure is not strong enough to support body weight in broilers with high growth rates. In this study, genetic parameters were estimated for body weight at 42 days of age (BW42), and tibia traits (length, width, and weight) in a population of broiler chickens. ... more

B.N.N. Ragognetti; N.B. Stafuzza; T.C.S. Chud; N.V. Grupioni; V.A.R. Cruz; J.O. Peixoto; K. Nones; M.C. Ledur; D.P. Munari; T.B.R. Silva