Research Article

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Allelic frequencies; meat quality; Myogenic determination gene 1; Qinchuan cattle; Single nucleotide polymorphism

The myogenic determination 1 (MyoD1) gene is a member of the MyoD gene family. It encodes for skeletal muscle-specific transcription factors containing highly conserved basic helix-loop-helix regions that perform important roles in the initiation, maintenance, and regulation of phenotypic traits. We investigated a new single nucleotide polymorphism (SNP) in the MyoD1 gene to evaluate ... more

J.A. Ujan; L.S. Zan; H.B. Wang; S.A. Ujan; C. Adoligbe; H.C. Wang; S.F. Biao
Dairy cattle; Fertility; Growth hormone; IGF-1; Single nucleotide polymorphism

The somatotrophic axis (GH-IGF) is a key regulator of animal growth and development, affecting performance traits that include milk production, growth rate, body composition, and fertility. The aim of this study was to quantify the association of previously identified SNPs in bovine growth hormone (GH1) and insulin-like growth factor 1 (IGF-1) genes with direct ... more

M.P. Mullen; C.O. Lynch; S.M. Waters; D.J. Howard; P. O’Boyle; D.A. Kenny; F. Buckley; B. Horan; M.G. Diskin
Essential hypertension; Mongolian population; Single nucleotide polymorphism; TSC

We investigated a possible association between genetic variations in the thiazide-sensitive Na-Cl cotransporter (TSC) gene and essential hypertension (EH) in the Mongolian and Han ethnic groups in Inner Mongolia. Our study included 385 unrelated Mongolian herdsmen and 523 Han farmers. Nine tagSNPs of TSC were identified from the Chinese HapMap database based on pairwise ... more

P.Y. Chang; L.G. Zhao; X.L. Su
Aldehyde dehydrogenase 2; Essential hypertension; Mongolian nationality; Single nucleotide polymorphism

Mongolians are known as heavy drinkers, and they have a high incidence of essential hypertension, which may be an associated pathology. We examined a possible association of essential hypertension and polymorphism of the aldehyde dehydrogenase 2 (ALDH2) gene in Mongolians from Inner Mongolia. Single nucleotide polymorphism rs671 of ALDH2 was detected by TaqMan PCR in 91 essential ... more

T. Hasi; L. Hao; L. Yang; X.L. Su
Association study; Major depressive disorder; Rs6311; Serotonin 2A receptor; Single nucleotide polymorphism; Thai population

Several lines of evidence suggest a molecular role of -1438A/G single nucleotide polymorphism in the 5-HTR2A gene promoter (rs6311) in regulating the expression of this gene, making rs6311 polymorphism a promising candidate for an association study. We looked for a possible association between rs6311 polymorphism and major depressive disorder (MDD) in a northeastern Thai ... more

T. Tencomnao; V. Thongrakard; W. Phuchana; T. Sritharathikhun; S. Suttirat
CDKAL1; Meta-analysis; Single nucleotide polymorphism; Type 2 diabetes

CDKAL1 (cyckin-dependent kinase 5 regulatory subunit-associated protein 1-like 1) has been shown to be associated with type 2 diabetes in various ethnic groups; however, contradictory results have been reported. We performed a comprehensive meta-analysis of 21 studies for rs7756992, 17 studies for rs7754840 and 10 studies for rs10946398 variants of the CDKAL1 gene to ... more

M.A.S. Dehwah; M. Wang; Q.Y. Huang
Allele frequency; DNA; Pool; Single nucleotide polymorphism

We examined the efficiency of direct sequencing of pooled DNA for developing common single nucleotide polymorphisms (SNPs) and its accuracy for estimating allele frequencies. A pool of 200 control DNAs was established and was used for developing SNPs and estimating minor allele frequencies (MAF). The sensitivity of the pooled DNA method for successfully detecting an SNP with an MAF >0. ... more

M.K. Kim; T.S. Nam; K.H. Choi; S.Y. Jang; Y.O. Kim; M.C. Lee
Association study; DAT1; Major depressive disorder; rs40184; Single nucleotide polymorphism; Thai population

Several lines of evidence suggest that the dopaminergic system is involved in the pathophysiology of major depressive disorder (MDD). Since the dopamine transporter (DAT1, also known as SLC6A3), mediates the active reuptake of dopamine from the synapses and thereby plays a vital role in the regulation of dopaminergic neurotransmission, we looked for a possible association between the C/T ... more

N. Pattarachotanant; T. Sritharathikhun; S. Suttirat; T. Tencomnao
Association study; Psoriasis; Psoriasis subtype; Serotonin 2A receptor; Single nucleotide polymorphism; Thai population

Expression of serotonin 2A receptor (5-HTR2A) is known to increase in psoriasis, a chronic inflammatory skin disease. We investigated a possible association between the -1438A/G single nucleotide polymorphism (rs6311) in the promoter region of 5-HTR2A gene and psoriasis in a Thai population. One hundred and twelve psoriatic patients and 151 unrelated healthy controls ... more

C. Ronpirin; T. Tencomnao; J. Wongpiyabovorn
Chinese Han population; Hypertension; Single nucleotide polymorphism

Human hypertension is a complex, multifactorial disease. Multiple variants associated with hypertension have been identified in the large numbers of genome-wide association studies, meta-analysis, and case-control studies. The present study investigated the association between the single nucleotide polymorphisms (SNPs) of five candidate genes and the susceptibility and prognosis of ... more

G.L. Hong; X.Z. Chen; Y. Liu; Y.H. Liu; X. Fu; S.B. Lin; Q. Zhu