Research Article

Related GMR Articles

11/11/2014
Astrocytes; Differentially expressed genes; Functional analysis; Module analysis; Optic nerve

Microarray data of astrocytes extracted from the optic nerves of donors with and without glaucoma were analyzed to screen for differentially expressed genes (DEGs). Functional exploration with bioinformatic tools was then used to understand the roles of the identified DEGs in glaucoma. Microarray data were downloaded from the Gene Expression Omnibus (GEO) database, which contains 13 ... more

Y. Wu; W.D. Zang; W. Jiang
09/03/2013
Association analysis; Bone mineral density; Osteoporosis; Osteoprotegerin gene; Postmenopausal women; Single nucleotide polymorphisms

Osteoporosis is an important and common complex health problem, particularly in postmenopausal women. It is characterized by a reduction in bone mineral density (BMD) and a deterioration of bone microarchitecture with a consequent increase of fracture risk. The osteoprotegerin (OPG) gene is considered to play an important role in the pathogenesis of osteoporosis. We analyzed SNPs ... more

J.F. Song; Z.Z. Jing; W. Hu; Y.X. Su
07/30/2013
Bone mineral density; Osteoporosis; Postmenopausal women; VDR polymorphisms

We investigated associations between vitamin D receptor (VDR) gene polymorphisms, FokI T>C (rs2228570), BsmI G>A (rs1544410), ApaI G>T (rs7975232), and TaqI T>C (rs731236), with bone mineral density (BMD) in postmenopausal Mexican-Mestizo women. Three hundred and twenty postmenopausal women participated, who were classified ... more

A. González-Mercado; J.Y. Sánchez-López; J.A. Regla-Nava; J.I. Gámez-Nava; L. González-López; J. Duran-Gonzalez; A. Celis; F.J. Perea-Díaz; M. Salazar-Páramo; B. Ibarra
09/26/2014
Bone mineral density; BsmI; Gene polymorphism; Meta-analysis; Vitamin D receptor

The vitamin D receptor BsmI gene polymorphism is reportedly associated with low bone mineral density (BMD) in postmenopausal women, but results from previous studies are conflicting. In the present study, we investigated the association between this polymorphism and the risk of low BMD through a meta-analysis of published studies. A literature search of the Pubmed, Embase, and ... more

C. Ma; Q.L. Zhou; Y.J. Deng; X. Liang; D.P. Wu; Y.Z. Dong
03/24/2014
Bone mineral density; Genetic variants; Osteoporosis; Osteoprotegerin gene

The purpose of this study was to investigate the association of the g.27667T>A genetic variant in the osteoprotegerin (OPG) gene with bone mineral density (BMD) and osteoporosis. A total of 393 primary osteoporosis subjects and 402 healthy controls were recruited. The BMD of the femoral neck hip, lumbar spine (L2-4), and total hip were evaluated by Norland XR-46 dual-energy ... more

J.J. Zhao; D.H. Feng; L. Cheng; T. Lu; L. Wang
08/28/2014
Bone mineral density; Genetic variant; Osteoprotegerin gene; Primary osteoporosis; Risk factor

Primary osteoporosis is a common health problem in postmenopausal women. This study aimed to detect the association of the g.19074G>A genetic variant in the osteoprotegerin gene (OPG) with bone mineral density (BMD) and primary osteoporosis. The created restriction site-polymerase chain reaction method was used to investigate the g.19074G>A genetic variant. The BMD of the ... more

Y.D. Zhang; Z. Zhang; N.F. Zhou; W.T. Jia; X.G. Cheng; X.J. Wei
02/14/2014
Bone mineral density; Chinese women; Genetic polymorphism; Osteoporosis; Osteoprotegerin gene; Risk factor

Osteoporosis is a common multifactorial disease in postmenopausal women. This study aimed to investigate the association of the g.27563G>A osteoprotegerin (OPG) genetic polymorphism with bone mineral density (BMD) and osteoporosis. A case-control study was carried out with 435 osteoporosis postmenopausal women cases and 442 age-matched healthy controls. The BMD at the femoral ... more

Y.P. Liu; D.W. Zhao; W.M. Wang; B.J. Wang; Y. Zhang; Z.G. Li
09/13/2013
Arabidopsis; Differentially expressed genes; Drought; Microarray; Rewatering

Drought is a major limiting factor in crop production. Rewatering is a process opposite to drought, allowing plants to recover to their normal physiological state. To understand more thoroughly the set of genes involved in plant response to drought, we comparatively and jointly analyzed the microarray data of drought and rewatering experiments in Arabidopsis. A total of 3833 ... more

Z.H. Xu; W.R. Wu
12/12/2014
Bioinformatics; Differentially expressed genes; Leukemia

The purpose of this study was to identify differentially expressed genes and analyze biological processes related to leukemia. A meta-analysis was performed using the Rank Product package of Gene Expression Omnibus datasets for leukemia. Next, Gene Ontology-enrichment analysis and pathway analysis were performed using the Gene Ontology website and Kyoto Encyclopedia of Genes and Genomes ... more

Z.Y. Zhang; R.Q. Xu; T.J. Guo; M. Zhang; D.X. Li; X.Y. Lu
09/29/2014
Breast cancer; Differentially expressed genes; Gene coexpression network analysis; Pathway analysis

The aim of this study was to identify key genes related to invasive ductal carcinoma (IDC) of the breast by analyzing gene expression data with bioinformatic tools. Microarray data set GSE31138 was downloaded from Gene Expression Omnibus, including 3 breast cancer tissue samples and 3 normal controls. Differentially expressed genes (DEGs) between breast cancer and normal control were ... more

J.L. Huan; X. Gao; L. Xing; X.J. Qin; H.X. Qian; Q. Zhou; L. Zhu

Pages