Research Article

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01/24/2013
Cross-species amplification; Lake minnows; Microsatellites

Fifteen sets of PCR primers designed for the amplification of microsatellite loci from Danio rerio and Phoxinus neogaeus Campostoma DNA that have been proven applicable for molecular studies of several species of cyprinids were tested for amplification of microsatellites from lake minnow DNA. The samples were taken from 298 fish inhabiting 6 distinct populations located ... more

D. Kaczmarczyk
06/15/2010
Chicken; Cross-species amplification; Grey partridge; Microsatellite markers; Turkey

We used the partially sequenced genomes of the turkey and chicken to find a large number of microsatellite markers. We then characterized 10 polymorphic microsatellite markers developed by cross-species amplification from economically and ecologically important birds to various European sub-species of the grey partridge. Even though we used cross-species amplification, a high degree of ... more

N. Bech; C. Novoa; J.F. Allienne; J. Boissier
12/16/2013
Cross-species amplification; Microsatellite marker; Paralichthys lethostigma; Pleuronectiformes

We investigated the genetic diversity of the southern flounder Paralichthys lethostigma. Microsatellite-enriched libraries were constructed and novel microsatellite markers were developed and applied for genetic detection of wild populations. Cross-species amplification was also conducted in five pleuronectiforme species. Of 45 randomly selected and sequenced clones, 43 contained ... more

Y.J. Xu; M.J. Liao; Y.G. Wang; Z.C. Liu; P. Qin; Z. Zhang; X.J. Rong; X.Z. Liu
11/18/2013
African Silverbil; Cross-species amplification; Lonchura cantans; Microsatellite markers

We tested the cross-amplification of eight microsatellites developed for Bengalese finch in African Silverbill (Lonchura cantans). In order to develop resources for conservation genetic studies in the species L. cantans, we tested the amplification success and polymorphism in eight previously developed microsatellite loci, in L. cantans. All eight microsatellite ... more

N.R. Parine; D. Kumar; A.A.K. Pathan; M.S. Elrobh; W. Khan; M. Alanazi
05/21/2013
Cross-species amplification; Culter alburnus; Culter mongolicus; Microsatellite

Fifteen new polymorphic microsatellite markers were developed for Culter alburnus. In 32 individuals representing a wild population of the Danjiangkou Reservoir, Hubei, China, the number of alleles at these loci varied between 2 and 10, with an average of 5.5. The average observed and expected heterozygosities were 0.664 and 0.681, respectively. The polymorphism information ... more

P.Z. Qi; C.X. Xie; B.Y. Guo; C.W. Wu; S.M. Lu; Y.J. Duan
05/21/2012
Cross-species amplification; Larimichthys polyactis; Microsatellite loci

The small yellow croaker (Larimichthys polyactis) is a highly valued fish for human consumption found in the Western Pacific that was considered endangered until recently because of overfishing. We selected microsatellite markers for this species from markers developed for Miichthys miiuy, also of the family Sciaenidae. Among 43 markers polymorphic for M. miiuy ... more

D.Q. Sun; H.Y. Li; T.J. Xu; R.X. Wang
01/10/2014
Cross-species amplification; Inimicus japonicus; Microsatellite markers; Sebastiscus marmoratus

A (GT/CA)13-microsatellite-enriched genomic library of the false kelpfish Sebastiscus marmoratus was constructed, and 20 polymorphic microsatellite loci were isolated and characterized. The polymorphisms were investigated in 48 wild individuals from a single population collected from the northern Yellow Sea. The numbers of alleles per locus varied from 4-22 with an average of 9. The ... more

H.B. Liu; S.F. Liu; J.B. Ye; Y.J. Yuan; S.X. Ding; Z.M. Zhuang
12/11/2007
Bovidae; Cervidae; Cross-species amplification; Microsatellite; Pampas deer

In cross-species amplification tests of 15 ungulate primers in pampas deer, five were retained to form a small panel of highly polymorphic loci that could be used to efficiently screen populations of this endangered species. The polymerase chain reactions were performed incorporating the universal fluorescent labeled M13 (-21) primer. In 69 pampas deer, average allelic diversity was 15, ... more

J.E. Maldonado; M. Cosse; S. González
09/30/2007
genetic relationships; Groundnut; Microsatellites; peanut; Simple sequence repeat

The Kayabi Indians who inhabit the Xingu Indigenous Park, located in West Central Brazil, have grown and managed peanuts for a long time. A great number of landraces are being maintained by these tribes and some of this germplasm has morphological traits that exceed the variation described in the taxonomic literature. Here, we analyzed the genetic variability of these landraces using a ... more

F.O. Freitas; M.C. Moretzsohn; J.F.M. Valls
10/05/2007
FISH; Genomic library; Jackknife estimate; Microsatellites; Piracema species; Prochilodus lineatus

We described five novel microsatellite loci for the piracema fish species Prochilodus lineatus (Characiformes), endemic to South America and of extreme importance to both commercial and artisanal fisheries across its occurrence area. A primary, unenriched genomic library was constructed and radioactively screened for repetitive motifs. Positive clones were automatically ... more

G.M. Yazbeck; E. Kalapothakis

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