Publications
Found 2 results
Filters: Author is S.O. Bafeel [Clear All Filters]
“Genetic diversity among different physiological traits of Sorghum bicolor cultivars of subtropical origin”, vol. 14, pp. 9974-9984, 2015.
, “DNA barcoding of arid wild plants using rbcL gene sequences”, vol. 11, pp. 1934-1941, 2012.
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Arif IA, Bakir MA, Khan HA, Al Farhan AH, et al. (2010). Application of RAPD for molecular characterization of plant species of medicinal value from an arid environment. Genet. Mol. Res. 9: 2191-2198.
http://dx.doi.org/10.4238/vol9-4gmr848
PMid:21064026
Asahina H, Shinozaki J, Masuda K, Morimitsu Y, et al. (2010). Identification of medicinal Dendrobium species by phylogenetic analyses using matK and rbcL sequences. J. Nat. Med. 64: 133-138.
http://dx.doi.org/10.1007/s11418-009-0379-8
PMid:20140532
Bafeel SO, Arif IA, Bakir MA, Khan HA, et al. (2011). Comparative evaluation of PCR success with universal primers of maturase K (matK) and ribulose-1, 5-bisphosphate carboxylase oxygenase large subunit (rbcL) for barcoding of some arid plants. Plant Omics J. 4: 195-198.
Baker HG (1989). Some Aspects of the Natural History of Seed Banks. In: Ecology of Soil Seed Banks (Leck MA, Parker VT and Simpson RL, eds.). Academic Press, San Diego, 9-21.
PMCid:1350121
Bakker JP and Berendse F (1999). Constraints in the restoration of ecological diversity in grassland and heathland communities. Trends Ecol. Evol. 14: 63-68.
http://dx.doi.org/10.1016/S0169-5347(98)01544-4
Batanouny KH (2001). Plants in the Deserts of the Middle East. Springer, New York.
Burgess KS, Fazekas AJ, Kesanakurti PR, Graham SW, et al. (2011). Discriminating plant species in a local temperate flora using the rbcL+matK DNA barcode. Method Ecol. Evol. 2: 333-340.
http://dx.doi.org/10.1111/j.2041-210X.2011.00092.x
CBOL Plant Working Group (2009). A DNA barcode for land plants. Proc. Natl. Acad. Sci. U. S. A. 106: 12794-12797.
http://dx.doi.org/10.1073/pnas.0905845106
PMid:19666622 PMCid:2722355
Chase MW, Salamin N, Wilkinson M, Dunwell JM, et al. (2005). Land plants and DNA barcodes: short-term and long-term goals. Philos. Trans. R. Soc. Lond. B Biol. Sci. 360: 1889-1895.
http://dx.doi.org/10.1098/rstb.2005.1720
PMid:16214746 PMCid:1609218
de Groot GA, During HJ, Maas JW, Schneider H, et al. (2011). Use of rbcL and trnL-F as a two-locus DNA barcode for identification of NW-European ferns: an ecological perspective. PLoS One 6: e16371.
http://dx.doi.org/10.1371/journal.pone.0016371
PMid:21298108 PMCid:3027654
Duffy AM, Kelchner SA and Wolf PG (2009). Conservation of selection on matK following an ancient loss of its flanking intron. Gene 438: 17-25.
http://dx.doi.org/10.1016/j.gene.2009.02.006
PMid:19236909
Fazekas AJ, Burgess KS, Kesanakurti PR, Graham SW, et al. (2008). Multiple multilocus DNA barcodes from the plastid genome discriminate plant species equally well. PLoS One 3: e2802.
http://dx.doi.org/10.1371/journal.pone.0002802
PMid:18665273 PMCid:2475660
Felsenstein J (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
http://dx.doi.org/10.2307/2408678
Graham S (2002). Global estimate of endangered plant species triples. Scientific American. Available at [http://www.scientificamerican.com/article.cfm?id=global-estimate-of-endang]. Accessed January 10, 2012.
Hebert PD and Gregory TR (2005). The promise of DNA barcoding for taxonomy. Syst. Biol. 54: 852-859.
http://dx.doi.org/10.1080/10635150500354886
PMid:16243770
Hegazy AK, Hammouda O, Lovettt-Doust J and Gomaa NH (2009). Variations of the germinable soil seed bank along the altitudinal gradient in the northwestern Red Sea region. Acta Ecol. Sin. 29: 20-29.
http://dx.doi.org/10.1016/j.chnaes.2009.04.004
Hollingsworth ML, Andra CA, Forrest LL, Richardson J, et al. (2009). Selecting barcoding loci for plants: evaluation of seven candidate loci with species-level sampling in three divergent groups of land plants. Mol. Ecol. Resour. 9: 439-457.
http://dx.doi.org/10.1111/j.1755-0998.2008.02439.x
PMid:21564673
Joshi K, Chavan P, Warude D and atwardhan B (2004). Molecular markers in herbal drug technology. Curr. Sci. 87: 159-165.
Kesanakurti PR, Fazekas AJ, Burgess KS, Percy DM, et al. (2011). Spatial patterns of plant diversity below-ground as revealed by DNA barcoding. Mol. Ecol. 20: 1289-1302.
http://dx.doi.org/10.1111/j.1365-294X.2010.04989.x
PMid:21255172
Kress WJ, Wurdack KJ, Zimmer EA, Weigt LA, et al. (2005). Use of DNA barcodes to identify flowering plants. Proc. Natl. Acad. Sci. U. S. A. 102: 8369-8374.
http://dx.doi.org/10.1073/pnas.0503123102
PMid:15928076 PMCid:1142120
Kress WJ, Erickson DL, Jones FA, Swenson NG, et al. (2009). Plant DNA barcodes and a community phylogeny of a tropical forest dynamics plot in Panama. Proc. Natl. Acad. Sci. U. S. A. 106: 18621-18626.
http://dx.doi.org/10.1073/pnas.0909820106
PMid:19841276 PMCid:2763884
Li FW, Tan BC, Buchbender V, Moran RC, et al. (2009). Identifying a mysterious aquatic fern gametophyte. Plant Syst. Evol. 281: 77-86.
http://dx.doi.org/10.1007/s00606-009-0188-2
Plunkett G, Soltis D and Soltis P (1997). Clarification of the relationship beteen Apiaceae and Araliaceae based on matK and rbcL sequence data. Am. J. Bot. 84: 565.
http://dx.doi.org/10.2307/2446032
PMid:21708608
Ratnasingham S and Hebert PDN (2007). BOLD: The Barcode of Life Data System (www.barcodinglife.org). Mol. Ecol. Note. 7: 355-364.
Roy S, Tyagi A, Shukla V, Kumar A, et al. (2010). Universal plant DNA barcode loci may not work in complex groups: a case study with Indian berberis species. PLoS One 5: e13674.
http://dx.doi.org/10.1371/journal.pone.0013674
PMid:21060687 PMCid:2965122
Soltis DE, Kuzoff RK, Conti E, Gornall R, et al. (1996). matK and rbcL gene sequence data indicate that Saxifraga (Saxifragaceae) is polyphyletic. Am. J. Bot. 83: 371-382.
http://dx.doi.org/10.2307/2446171
Spooner DM (2009). DNA barcoding will frequently fail in complicated groups: An example in wild potatoes. Am. J. Bot. 96: 1177-1189.
http://dx.doi.org/10.3732/ajb.0800246
PMid:21628268
Tamura K and Nei M (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10: 512-526.
PMid:8336541
Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599.
http://dx.doi.org/10.1093/molbev/msm092
PMid:17488738
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, et al. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882.
http://dx.doi.org/10.1093/nar/25.24.4876
PMid:9396791 PMCid:147148
Tsukaya H, Nakajima M and Okada H (2011). Kalimantanorchis: A new genus of Mycotrophic orchid from West Kalimantan, Borneo. Syst. Bot. 36: 49-52.
http://dx.doi.org/10.1600/036364411X553117
Van de Wiel CC, Van Der Schoot J, Van Valkenburg JL, Duistermaat H, et al. (2009). DNA barcoding discriminates the noxious invasive plant species, floating pennywort (Hydrocotyle ranunculoides L.f.), from non-invasive relatives. Mol. Ecol. Resour. 9: 1086-1091.
http://dx.doi.org/10.1111/j.1755-0998.2009.02547.x
PMid:21564846
Will KW, Mishler BD and Wheeler QD (2005). The perils of DNA barcoding and the need for integrative taxonomy. Syst. Biol. 54: 844-851.
http://dx.doi.org/10.1080/10635150500354878
PMid:16243769
Zhang YB, Shaw PC, Sze CW, Wang ZT, et al. (2007). Molecular authentification of Chinese herbal materials. J. Food Drug Anal. 15: 1-9.