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“Efficiency of RAPD versus SSR markers for determining genetic diversity among popcorn lines”, vol. 9, pp. 9-18, 2010.
, Aguiar CG, Schuster I, Amaral AT Jr, Scapim CA, et al. (2008). Heterotic groups in tropical maize germplasm by test crosses and simple sequence repeat markers. Genet. Mol. Res. 7: 1233-1244.
http://dx.doi.org/10.4238/vol7-4gmr495
PMid:19065758
Amaral Júnior AT (1999a). Divergência genética entre acessos de moranga do banco de germoplasma de hortaliças da Universidade Federal de Viçosa. Hortic. Bras. 17: 3-6.
http://dx.doi.org/10.1590/S0102-05361999000100001
Amaral Júnior AT, Casali VWD, Cruz CD and Finger FL (1999b). Genetic inferences on yield and quality of tomato in a diallel cross. [Inferências genéticas na produção e qualidade de tomateiro sob cruzamento dialélico]. Pesq. Agropec. Bras. 34: 1407-1416.
http://dx.doi.org/10.1590/S0100-204X1999000800013
Bernardo R (2008). Molecular markers and selection for complex traits in plants: learning from the last 20 years. Crop Sci. 48: 1649-1664.
http://dx.doi.org/10.2135/cropsci2008.03.0131
Binneck E, Nedel JL and Dellagostin OA (2002). RAPD analysis on cultivar identification: a useful methodology? [Análise de RAPD na identificação de cultivares: uma metodologia útil?]. Rev. Bras. Sem. 24: 183-196.
Bracco M, Lia VV, Gottlieb AM, Camara HJ, et al. (2009). Genetic diversity in maize landraces from indigenous settlements of Northeastern Argentina. Genetica 135: 39-49.
http://dx.doi.org/10.1007/s10709-008-9252-z
PMid:18322805
Bruel DC, Carpentieri-Pípolo V, Gerage AC, Fonseca Júnior NS, et al. (2006). Genetic distance estimated by RAPD markers and its relationship with hybrid performance in maize. Pesq. Agropec. Bras. 41: 1491-1498.
http://dx.doi.org/10.1590/S0100-204X2006001000006
Chen X and Sullivan PF (2003). Single nucleotide polymorphism genotyping: biochemistry, protocol, cost and throughput. Pharmacogenomics J. 3: 77-96.
http://dx.doi.org/10.1038/sj.tpj.6500167
PMid:12746733
Cruz CD (2006). Programa GENES: Estatística Experimental e Matrizes. Universidade Federal de Viçosa, Viçosa.
Dandolini TS, Scapim CA, Amaral Júnior AT, Mangolin CA, et al. (2008). Genetic divergence in popcorn lines detected by microsatellite markers. Crop Breed. Appl. Biotechnol. 8: 313-320.
Demeke T, Sasikumar B, Hucl P and Chibbar RN (1997). Random amplified polymorphic DNA (RAPD) in cereal improvement. Maydica 42: 133-142.
Don RH, Cox PT, Wainwright BJ, Baker K, et al. (1991). 'Touchdown' PCR to circumvent spurious priming during gene amplification. Nucleic Acids Res. 19: 4008.
http://dx.doi.org/10.1093/nar/19.14.4008
PMid:1861999 PMCid:328507
Garcia AAF, Benchimol LL, Barbosa AMM, Geraldi IO, et al. (2004). Comparison of RAPD, RFLP, AFLP and SSR markers for diversity studies in tropical maize inbred lines. Genet. Mol. Biol. 27: 579-588.
http://dx.doi.org/10.1590/S1415-47572004000400019
Goncalves LS, Rodrigues R, Amaral AT Jr, Karasawa M, et al. (2008a). Comparison of multivariate statistical algorithms to cluster tomato heirloom accessions. Genet. Mol. Res. 7: 1289-1297.
http://dx.doi.org/10.4238/vol7-4gmr526
PMid:19065764
Gonçalves LSA, Sudré CP, Bento CS, Moulin MM, et al. (2008b). Divergência genética em tomate estimada por marcadores RAPD em comparação com descritores multicategóricos. Hortic. Bras. 26: 364-370.
http://dx.doi.org/10.1590/S0102-05362008000300014
Gonçalves LS, Rodrigues R, do Amaral Júnior AT, Karasawa M, et al. (2009). Heirloom tomato gene bank: assessing genetic divergence based on morphological, agronomic and molecular data using a Ward-modified location model. Genet. Mol. Res. 8: 364-374.
http://dx.doi.org/10.4238/vol8-1gmr549
PMid:19440972
Goodman MM and Stuber CW (1983). Races of maize. VI. Isozyme variation among races of maize in Bolivia. Maydica 28: 169-187.
Hoisington D, Khairallah M and González-Léon D (1994). Laboratory Potocols: CIMMYT Applied Molecular Genetics Laboratory. 2nd edn. CIMMYT, Mexico.
Kantety RV, Zeng XP, Bebbetzen JL and Zehr BE (1995). Assessment of genetic diversity in dent and popcorn (Zea mays L.) inbreed lines using intersimple sequence repeat (ISSR) amplification. Mol. Breed. 1: 365-373.
http://dx.doi.org/10.1007/BF01248414
Kilian A, Huttner E, Wenzl P, Jaccoud D, et al. (2005). The Fast and the Cheap: SNP and DArT-based Whole Genome Profiling for Crop Improvement. In: Proceedings of the International Congress in the Wake of the Double Helix: From the Green Revolution to the Gene Revolution (Tuberosa R, Phillips RL and Gale M, eds.). May 27-31, Bologna, 443-461.
Lanza LLB, Souza Júnior CL, Ottoboni LMM, Vieira MLC, et al. (1997). Genetic distance of inbred lines and prediction of maize single-cross performance using RAPD markers. Theor. Appl. Genet. 94: 1023-1030.
http://dx.doi.org/10.1007/s001220050510
Li YL, LV DB, Wang YZ, Chen SJ, et al. (2004). Study on the genetic diversity of popcorn inbreds and their germplasm relationship with normal corn inbreds using SSR markers. Maydica 49: 327-333.
Lu H and Bernardo R (2001). Molecular marker diversity among current and historical maize inbreds. Theor. Appl. Genet. 103: 613-617.
http://dx.doi.org/10.1007/PL00002917
Mohammadi SA and Prasanna BM (2003). Analysis of genetic diversity in crop plants - salient statistical tools and considerations. Crop Sci. 43: 1235-1248.
http://dx.doi.org/10.2135/cropsci2003.1235
Moose SP and Mumm RH (2008). Molecular plant breeding as the foundation for 21st century crop improvement. Plant Physiol. 147: 969-977.
http://dx.doi.org/10.1104/pp.108.118232
PMid:18612074 PMCid:2442525
Mullis KB and Faloona FA (1987). Specific synthesis of DNA in vitro via a polymerase-catalyzed chain reaction. Methods Enzymol. 155: 335-350.
http://dx.doi.org/10.1016/0076-6879(87)55023-6
Munhoz REF, Prioli AJ, Amaral Júnior AT, Scapim CA, et al. (2009). Genetic distances between popcorn populations based on molecular markers and correlations with heterosis estimates made by diallel analysis of hybrids. Genet. Mol. Res. 8: 951-962.
PMid:19731196
Pejic I, Ajmone-Marsan P, Morgante M, Kozumplick V, et al. (1998). Comparative analysis of genetic similarity among maize inbred lines detected by RFLPs, RAPDs, SSRs, and AFLPs. Theor. Appl. Genet. 97: 1248-1255.
http://dx.doi.org/10.1007/s001220051017
Saiki RK, Scharf S, Faloona F, Mullis KB, et al. (1985). Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science 230: 1350-1354.
http://dx.doi.org/10.1126/science.2999980
PMid:2999980
Saker MM, Youssef SS, Abdallah NA, Bashandy HS, et al. (2005). Genetic analysis of some Egyptian rice genotypes using RAPD, SSR and AFLP. Afr. J. Biotechnol. 4: 882-890.
Santacruz-Varela A, Widrlechner MP, Ziegler KE, Salvador RJ, et al. (2004). Phylogenetic relationships among North American popcorns and their evolutionary links to Mexican and South American popcorns. Crop Sci. 44: 1456-1467.
http://dx.doi.org/10.2135/cropsci2004.1456
Schlötterer C (2004). The evolution of molecular markers - just a matter of fashion? Nat. Rev. Genet. 5: 63-69.
http://dx.doi.org/10.1038/nrg1249
PMid:14666112
Schulman AH (2007). Molecular markers to assess genetic diversity. Euphytica 158: 313-321.
http://dx.doi.org/10.1007/s10681-006-9282-5
Silva TA, Pinto RJB, Scapim CA, Mangolin CA, et al. (2009). Genetic divergence in popcorn genotypes using microsatellites in bulk genomic DNA. Crop Breed. Appl. Genet. 9: 31-36.
Souza SGH, Carpentieri-Pípolo V, Ruas CF, Carvalho VP, et al. (2008). Comparative analysis of genetic diversity among the maize inbred lines (Zea mays L.) obtained by RAPD and SSR markers. Braz. Arch. Biol. Technol. 51: 183-192.
http://dx.doi.org/10.1590/S1516-89132008000100022
Sudré CP, Leonardecz E, Rodrigues R, Amaral Júnior AT, et al. (2007). Genetic resources of vegetable crops: a survey in the Brazilian germplasm collections pictured through papers published in the journals of the Brazilian Society for Horticultural Science. Hortic. Bras. 25: 496-503.
http://dx.doi.org/10.1590/S0102-05362007000400002
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http://dx.doi.org/10.1093/nar/17.16.6463
PMid:2780284 PMCid:318341
Vilela FO, Amaral Júnior AT, Pereira MG, Scapim CA, et al. (2008). Effect of recurrent selection on the genetic variability of the UNB-2U popcorn population using RAPD markers. Acta Sci. Agron. 30: 25-30.
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http://dx.doi.org/10.1093/nar/23.21.4407
PMid:7501463 PMCid:307397
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http://dx.doi.org/10.1093/nar/18.24.7213
PMid:2259619 PMCid:332855
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http://dx.doi.org/10.1093/nar/18.22.6531
PMid:1979162 PMCid:332606
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http://dx.doi.org/10.2307/2406450
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PMid:7801381
Zietkiewicz E, Rafalski A and Labuda D (1994). Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20: 176-183.
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