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“Cloning and characterization of major histocompatibility complex class II genes in the stone flounder Kareius bicoloratus (Pleuronectidae)”, vol. 12, pp. 5820-5832, 2013.
, “Effect of inhibition of MEK pathway on 5-aza-deoxycytidine-suppressed pancreatic cancer cell proliferation”, vol. 12, pp. 5560-5573, 2013.
, , , “Bioinformatics analysis with graph-based clustering to detect gastric cancer-related pathways”, vol. 11, pp. 3497-3504, 2012.
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Altaf-Ul-Amin M, Shinbo Y, Mihara K, Kurokawa K, et al. (2006). Development and implementation of an algorithm for detection of protein complexes in large interaction networks. BMC Bioinformatics 7: 207.
http://dx.doi.org/10.1186/1471-2105-7-207
PMid:16613608 PMCid:1473204
Barbero S, Mielgo A, Torres V, Teitz T, et al. (2009). Caspase-8 association with the focal adhesion complex promotes tumor cell migration and metastasis. Cancer Res. 69: 3755-3763.
http://dx.doi.org/10.1158/0008-5472.CAN-08-3937
PMid:19383910 PMCid:2684981
Begnami MD, Fregnani JH, Nonogaki S and Soares FA (2010). Evaluation of cell cycle protein expression in gastric cancer: cyclin B1 expression and its prognostic implication. Hum. Pathol. 41: 1120-1127.
http://dx.doi.org/10.1016/j.humpath.2010.01.007
PMid:20334896
Calcagno DQ, Leal MF, Taken SS, Assumpcao PP, et al. (2005). Aneuploidy of chromosome 8 and C-MYC amplification in individuals from northern Brazil with gastric adenocarcinoma. Anticancer Res. 25: 4069-4074.
PMid:16309200
Cao HX, Li SP, Wu JZ, Gao CM, et al. (2010). Alcohol dehydrogenase-2 and aldehyde dehydrogenase-2 genotypes, alcohol drinking and the risk for stomach cancer in Chinese males. Asian Pac. J. Cancer Prev. 11: 1073-1077.
PMid:21133627
Cervantes A, Rodriguez BE, Perez FA and Chirivella G, I (2007). Molecular biology of gastric cancer. Clin. Transl. Oncol. 9: 208-215.
http://dx.doi.org/10.1007/s12094-007-0041-4
PMid:17462972
Choi MG, Noh JH, An JY, Hong SK, et al. (2009). Expression levels of cyclin G2, but not cyclin E, correlate with gastric cancer progression. J. Surg. Res. 157: 168-174.
http://dx.doi.org/10.1016/j.jss.2008.06.020
PMid:19559447
Crew KD and Neugut AI (2006). Epidemiology of gastric cancer. World J. Gastroenterol. 12: 354-362.
PMid:16489633
Cui J, Chen Y, Chou WC, Sun L, et al. (2011a). An integrated transcriptomic and computational analysis for biomarker identification in gastric cancer. Nucleic Acids Res. 39: 1197-1207.
http://dx.doi.org/10.1093/nar/gkq960
PMid:20965966 PMCid:3045610
Cui J, Li F, Wang G, Fang X, et al. (2011b). Gene-expression signatures can distinguish gastric cancer grades and stages. PLoS One 6: e17819.
http://dx.doi.org/10.1371/journal.pone.0017819
PMid:21445269 PMCid:3060867
Feng L, Xie Y, Zhang H and Wu Y (2012). miR-107 targets cyclin-dependent kinase 6 expression, induces cell cycle G1 arrest and inhibits invasion in gastric cancer cells. Med. Oncol. 29: 856-863.
http://dx.doi.org/10.1007/s12032-011-9823-1
PMid:21264532
Fukushima A, Kusano M, Redestig H, Arita M, et al. (2011). Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach. BMC Syst. Biol. 5: 1.
http://dx.doi.org/10.1186/1752-0509-5-1
PMid:21194489 PMCid:3030539
Hong F, Breitling R, McEntee CW, Wittner BS, et al. (2006). RankProd: a bioconductor package for detecting differentially expressed genes in meta-analysis. Bioinformatics 22: 2825-2827.
http://dx.doi.org/10.1093/bioinformatics/btl476
PMid:16982708
Huang dW, Sherman BT and Lempicki RA (2009). Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4: 44-57.
Ii M, Yamamoto H, Adachi Y, Maruyama Y, et al. (2006). Role of matrix metalloproteinase-7 (matrilysin) in human cancer invasion, apoptosis, growth, and angiogenesis. Exp. Biol. Med. 231: 20-27.
Inoue T, Kataoka H, Goto K, Nagaike K, et al. (2004). Activation of c-Met (hepatocyte growth factor receptor) in human gastric cancer tissue. Cancer Sci. 95: 803-808.
http://dx.doi.org/10.1111/j.1349-7006.2004.tb02185.x
PMid:15504247
Kanehisa M (2002). The KEGG database. Novartis Found. Symp. 247: 91-101.
http://dx.doi.org/10.1002/0470857897.ch8
PMid:12539951
Kang YH, Lee HS and Kim WH (2002). Promoter methylation and silencing of PTEN in gastric carcinoma. Lab. Invest. 82: 285-291.
http://dx.doi.org/10.1038/labinvest.3780422
PMid:11896207
Kawashima A, Tsugawa S, Boku A, Kobayashi M, et al. (2003). Expression of alphav integrin family in gastric carcinomas: increased alphavbeta6 is associated with lymph node metastasis. Pathol. Res. Pract. 199: 57-64.
http://dx.doi.org/10.1078/0344-0338-00355
PMid:12747466
Kim DH (2007). Prognostic implications of cyclin B1, p34cdc2, p27(Kip1) and p53 expression in gastric cancer. Yonsei Med. J. 48: 694-700.
http://dx.doi.org/10.3349/ymj.2007.48.4.694
PMid:17722244 PMCid:2628048
Kim J, Kim C, Kim TS, Bang SI, et al. (2006). IL-18 enhances thrombospondin-1 production in human gastric cancer via JNK pathway. Biochem. Biophys. Res. Commun. 344: 1284-1289.
http://dx.doi.org/10.1016/j.bbrc.2006.04.016
PMid:16650813
Kitoh T, Yanai H, Saitoh Y, Nakamura Y, et al. (2004). Increased expression of matrix metalloproteinase-7 in invasive early gastric cancer. J. Gastroenterol. 39: 434-440.
http://dx.doi.org/10.1007/s00535-003-1316-3
PMid:15175941
Kurayoshi M, Oue N, Yamamoto H, Kishida M, et al. (2006). Expression of Wnt-5a is correlated with aggressiveness of gastric cancer by stimulating cell migration and invasion. Cancer Res. 66: 10439-10448.
http://dx.doi.org/10.1158/0008-5472.CAN-06-2359
PMid:17079465
Lauren P (1965). The two histological main types of gastric carcinoma: diffuse and so-called intestinal-type carcinoma. An attempt at a histo-clinical classification. Acta Pathol. Microbiol. Scand. 64: 31-49.
PMid:14320675
Nishigaki M, Aoyagi K, Danjoh I, Fukaya M, et al. (2005). Discovery of aberrant expression of R-RAS by cancer-linked DNA hypomethylation in gastric cancer using microarrays. Cancer Res. 65: 2115-2124.
http://dx.doi.org/10.1158/0008-5472.CAN-04-3340
PMid:15781621
Park JH, Lee BL, Yoon J, Kim J, et al. (2010). Focal adhesion kinase (FAK) gene amplification and its clinical implications in gastric cancer. Hum. Pathol. 41: 1664-1673.
http://dx.doi.org/10.1016/j.humpath.2010.06.004
PMid:20869748
Pavelic K, Kolak T, Kapitanovic S, Radosevic S, et al. (2003). Gastric cancer: the role of insulin-like growth factor 2 (IGF 2) and its receptors (IGF 1R and M6-P/IGF 2R). J. Pathol. 201: 430-438.
http://dx.doi.org/10.1002/path.1465
PMid:14595755
Shin CM, Kim N, Cho SI, Kim JS, et al. (2011). Association between alcohol intake and risk for gastric cancer with regard to ALDH2 genotype in the Korean population. Int. J. Epidemiol. 40: 1047-1055.
http://dx.doi.org/10.1093/ije/dyr067
PMid:21507992
Smith MG, Hold GL, Tahara E and El-Omar EM (2006). Cellular and molecular aspects of gastric cancer. World J. Gastroenterol. 12: 2979-2990.
PMid:16718776
Song HS, Do YR, Kim IH, Sohn SS, et al. (2004). Prognostic significance of immunohistochemical expression of EGFR and C-erbB-2 oncoprotein in curatively resected gastric cancer. Cancer Res. Treat. 36: 240-245.
http://dx.doi.org/10.4143/crt.2004.36.4.240
PMid:20368841 PMCid:2843891
Stock M and Otto F (2005). Gene deregulation in gastric cancer. Gene 360: 1-19.
http://dx.doi.org/10.1016/j.gene.2005.06.026
PMid:16154715
Toyokawa T, Yashiro M and Hirakawa K (2009). Co-expression of keratinocyte growth factor and K-sam is an independent prognostic factor in gastric carcinoma. Oncol. Rep. 21: 875-880.
PMid:19287982
Yasui W, Oue N, Aung PP, Matsumura S, et al. (2005). Molecular-pathological prognostic factors of gastric cancer: a review. Gastric. Cancer 8: 86-94.
http://dx.doi.org/10.1007/s10120-005-0320-0
PMid:15864715
Yokozaki H, Yasui W and Tahara E (2001). Genetic and epigenetic changes in stomach cancer. Int. Rev. Cytol. 204: 49-95.
http://dx.doi.org/10.1016/S0074-7696(01)04003-7
Zheng L, Wang L, Ajani J and Xie K (2004). Molecular basis of gastric cancer development and progression. Gastric Cancer 7: 61-77.
http://dx.doi.org/10.1007/s10120-004-0277-4
PMid:15224192
“Ovine prion protein genotype frequencies in northwestern China”, vol. 11, pp. 1671-1681, 2012.
, Andreoletti O, Morel N, Lacroux C, Rouillon V, et al. (2006). Bovine spongiform encephalopathy agent in spleen from an ARR/ARR orally exposed sheep. J. Gen. Virol. 87: 1043-1046.
http://dx.doi.org/10.1099/vir.0.81318-0
PMid:16528056
Babar ME, Abdullah M, Nadeem A and Haq AU (2009). Prion protein gene polymorphisms in four goat breeds of Pakistan. Mol. Biol. Rep. 36: 141-144.
http://dx.doi.org/10.1007/s11033-007-9162-7
PMid:17934795
Baylis M, Goldmann W, Houston F, Cairns D, et al. (2002). Scrapie epidemic in a fully PrP-genotyped sheep flock. J. Gen. Virol. 83: 2907-2914.
PMid:12388827
Belt PB, Muileman IH, Schreuder BE, Bos-de Ruijter J, et al. (1995). Identification of five allelic variants of the sheep PrP gene and their association with natural scrapie. J. Gen. Virol. 76: 509-517.
http://dx.doi.org/10.1099/0022-1317-76-3-509
PMid:7897344
Buitkamp J and Semmer J (2004). A robust, low- to medium-throughput prnp genotyping system in sheep. BMC Infect. Dis. 4: 30.
http://dx.doi.org/10.1186/1471-2334-4-30
PMid:15345029 PMCid:517712
De Vries F, Borchers N, Hamann H, Drogemuller C, et al. (2004). Associations between the prion protein genotype and performance traits of meat breeds of sheep. Vet. Rec. 155: 140-143.
http://dx.doi.org/10.1136/vr.155.5.140
PMid:15338706
Goldmann W, Houston F, Stewart P, Perucchini M, et al. (2006). Ovine prion protein variant A136 R154 L168 Q171 increases resistance to experimental challenge with bovine spongiform encephalopathy agent. J. Gen. Virol. 87: 3741-3745.
http://dx.doi.org/10.1099/vir.0.82083-0
PMid:17098993
Hagenaars TJ, Donnelly CA and Ferguson NM (2006). Epidemiological analysis of data for scrapie in Great Britain. Epidemiol. Infect. 134: 359-367.
http://dx.doi.org/10.1017/S0950268805004966
PMid:16490141 PMCid:2870388
Humeny A, Schiebel K, Seeber S and Becker CM (2002). Identification of polymorphisms within the bovine prion protein gene (Prnp) by DNA sequencing and genotyping by MALDI-TOF-MS. Neurogenetics 4: 59-60.
http://dx.doi.org/10.1007/s10048-001-0126-0
PMid:12030333
Hunter N (1997). Molecular Biology and Genetics of Scrapie in Sheep. In: The Genetics of Sheep. (Piper L and Ruvinsky A, eds.). CAB International, Wallingford, 225-240.
PMid:9223132
Hunter N, Foster JD, Benson G and Hope J (1991). Restriction fragment length polymorphisms of the scrapie-associated fibril protein (PrP) gene and their association with susceptibility to natural scrapie in British sheep. J. Gen. Virol. 72: 1287-1292.
http://dx.doi.org/10.1099/0022-1317-72-6-1287
PMid:1675248
Hunter N, Goldmann W, Benson G, Foster JD, et al. (1993). Swaledale sheep affected by natural scrapie differ significantly in PrP genotype frequencies from healthy sheep and those selected for reduced incidence of scrapie. J. Gen. Virol. 74: 1025-1031.
http://dx.doi.org/10.1099/0022-1317-74-6-1025
PMid:8099602
Hunter N, Moore L, Hosie BD, Dingwall WS, et al. (1997). Association between natural scrapie and PrP genotype in a flock of Suffolk sheep in Scotland. Vet. Rec. 140: 59-63.
http://dx.doi.org/10.1136/vr.140.3.59
PMid:9023905
Ishiguro N, Shinagawa M, Onoe S, Yamanouchi K, et al. (1998). Rapid analysis of allelic variants of the sheep PrP gene by oligonucleotide probes. Microbiol. Immunol. 42: 579-582.
PMid:9776400
Lan Z, Wang ZL, Liu Y and Zhang X (2006). Prion protein gene (PRNP) polymorphisms in Xinjiang local sheep breeds in China. Arch. Virol. 151: 2095-2101.
http://dx.doi.org/10.1007/s00705-006-0758-3
PMid:16622593
Langeveld JP, Jacobs JG, Erkens JH, Bossers A, et al. (2006). Rapid and discriminatory diagnosis of scrapie and BSE in retro-pharyngeal lymph nodes of sheep. BMC Vet. Res. 2: 19.
http://dx.doi.org/10.1186/1746-6148-2-19
PMid:16764717 PMCid:1544330
Lee MA, Manley TR, Glass BC, Anderson RM, et al. (2007). Distribution of prion protein genotypes in breeds of sheep in New Zealand. N. Z. Vet. J. 55: 222-227.
http://dx.doi.org/10.1080/00480169.2007.36772
PMid:17928898
Lezmi S, Ronzon F, Bencsik A, Bedin A, et al. (2006). PrP(d) accumulation in organs of ARQ/ARQ sheep experimentally infected with BSE by peripheral routes. Acta Biochim. Pol. 53: 399-405.
PMid:16770445
Li YM and Tian B (2002). Chinese little-fat-tail sheep prion protein gene belongs to PrPARH genotype. Sheng Wu Hua Xue. Yu Sheng Wu Wu Li Xue Bao 34: 62-66.
Lipsky S, Brandt H, Luhken G and Erhardt G (2008). Analysis of prion protein genotypes in relation to reproduction traits in local and cosmopolitan German sheep breeds. Anim. Reprod. Sci. 103: 69-77.
http://dx.doi.org/10.1016/j.anireprosci.2006.12.005
PMid:17204379
Marcos-Carcavilla A, Moreno C, Serrano M, Laurent P, et al. (2010). Polymorphisms in the HSP90AA1 5' flanking region are associated with scrapie incubation period in sheep. Cell Stress Chaperones 15: 343-349.
http://dx.doi.org/10.1007/s12192-009-0149-2
PMid:19838832 PMCid:3082647
Melchior MB, Windig JJ, Hagenaars TJ, Bossers A, et al. (2010). Eradication of scrapie with selective breeding: are we nearly there? BMC Vet. Res. 6: 24.
http://dx.doi.org/10.1186/1746-6148-6-24
PMid:20441587 PMCid:2873516
Sanguinetti CJ, Dias NE and Simpson AJ (1994). Rapid silver staining and recovery of PCR products separated on polyacrylamide gels. Biotechniques 17: 914-921.
PMid:7840973
Sawalha RM, Brotherstone S, Man WY, Conington J, et al. (2007). Associations of polymorphisms of the ovine prion protein gene with growth, carcass, and computerized tomography traits in Scottish Blackface lambs. J. Anim. Sci. 85: 632-640.
http://dx.doi.org/10.2527/jas.2006-372
PMid:17040947
Sweeney T, Hanrahan JP and O'Doherty E (2007). Is there a relationship between prion protein genotype and ovulation rate and litter size in sheep? Anim. Reprod. Sci. 101: 153-157.
http://dx.doi.org/10.1016/j.anireprosci.2006.12.004
PMid:17204381
Tongue SC, Pfeiffer DU, Warner R, Elliott H, et al. (2006). Estimation of the relative risk of developing clinical scrapie: the role of prion protein (PrP) genotype and selection bias. Vet. Rec. 158: 43-50.
http://dx.doi.org/10.1136/vr.158.2.43
PMid:16415231
Tranulis MA, Osland A, Bratberg B and Ulvund MJ (1999). Prion protein gene polymorphisms in sheep with natural scrapie and healthy controls in Norway. J. Gen. Virol. 80: 1073-1077.
PMid:10211978
Vaccari G, Conte M, Morelli L, Di Guardo G, et al. (2004). Primer extension assay for prion protein genotype determination in sheep. Mol. Cell Probes 18: 33-37.
http://dx.doi.org/10.1016/j.mcp.2003.06.001
PMid:15036367
Vitezica ZG, Moreno CR, Lantier F, Lantier I, et al. (2007). Quantitative trait loci linked to PRNP gene controlling health and production traits in INRA 401 sheep. Genet. Sel. Evol. 39: 421-430.
http://dx.doi.org/10.1186/1297-9686-39-4-421
PMid:17612481 PMCid:2682820
Vollmert C, Windl O, Xiang W, Rosenberger A, et al. (2006). Significant association of a M129V independent polymorphism in the 5' UTR of the PRNP gene with sporadic Creutzfeldt-Jakob disease in a large German case-control study. J. Med. Genet. 43: e53.
http://dx.doi.org/10.1136/jmg.2006.040931
PMid:17047093 PMCid:2563174
Zhang L, Li N, Fan B, Fang M, et al. (2004). PRNP polymorphisms in Chinese ovine, caprine and bovine breeds. Anim. Genet. 35: 457-461.
http://dx.doi.org/10.1111/j.1365-2052.2004.01204.x
PMid:15566469
Zhou H, Hickford JG and Fang Q (2005). Technical note: determination of alleles of the ovine PRNP gene using PCR-single-strand conformational polymorphism analysis. J. Anim. Sci. 83: 745-749.
PMid:15753327
Zsolnai A, Anton I, Kuhn C and Fesus L (2003). Detection of single-nucleotide polymorphisms coding for three ovine prion protein variants by primer extension assay and capillary electrophoresis. Electrophoresis 24: 634-638.
http://dx.doi.org/10.1002/elps.200390074
PMid:12601731
“Clinical and genetic characterization of complete androgen insensitivity syndrome in a Chinese family”, vol. 10, pp. 1022-1031, 2011.
, Ahmed SF, Cheng A, Dovey L, Hawkins JR, et al. (2000). Phenotypic features, androgen receptor binding, and mutational analysis in 278 clinical cases reported as androgen insensitivity syndrome. J. Clin. Endocrinol. Metab. 85: 658-665.
doi:10.1210/jc.85.2.658
Alvarez NR, Lee TM and Solorzano CC (2005). Complete androgen insensitivity syndrome: the role of the endocrine surgeon. Am. Surg. 71: 241-243.
PMid:15869141
Avila DM, Wilson CM, Nandi N, Griffin JE, et al. (2002). Immunoreactive AR and genetic alterations in subjects with androgen resistance and undetectable AR levels in genital skin fibroblast ligand-binding assays. J. Clin. Endocrinol. Metab. 87: 182-188.
doi:10.1210/jc.87.1.182
Beitel LK, Prior L, Vasiliou DM, Gottlieb B, et al. (1994). Complete androgen insensitivity due to mutations in the probable alpha-helical segments of the DNA-binding domain in the human androgen receptor. Hum. Mol. Genet. 3: 21-27.
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Brinkmann AO (2001). Molecular basis of androgen insensitivity. Mol. Cell. Endocrinol. 179: 105-109.
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Cheikhelard A, Morel Y, Thibaud E, Lortat-Jacob S, et al. (2008). Long-term followup and comparison between genotype and phenotype in 29 cases of complete androgen insensitivity syndrome. J. Urol. 180: 1496-1501.
doi:10.1016/j.juro.2008.06.045
PMid:18710728
Cools M, Looijenga LH, Wolffenbuttel KP and Drop SL (2009). Disorders of sex development: update on the genetic background, terminology and risk for the development of germ cell tumors. World J. Pediatr. 5: 93-102.
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