Publications

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2012
B. C. Jiang, Yu, D. B., Wang, L. J., Dong, F. L., Kaleri, H. A., Wang, X. G., Ally, N., Li, J., and Liu, H. L., Doxycycline-regulated growth hormone gene expression system for swine, vol. 11, pp. 2946-2957, 2012.
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2011
D. B. Yu, Chen, R., Kaleri, H. A., Jiang, B. C., Xu, H. X., and Du, W. - X., Testing the utility of mitochondrial cytochrome oxidase subunit 1 sequences for phylogenetic estimates of relationships between crane (Grus) species, vol. 10, pp. 4048-4062, 2011.
Chaves AV, Clozato CL, Lacerda DR, Sari EH, et al. (2008). Molecular taxonomy of Brazilian tyrant-flycatchers (Passeriformes: Tyrannidae). Mol. Ecol. Resour. 8: 1169-1177. http://dx.doi.org/10.1111/j.1755-0998.2008.02218.x PMid:21586004   Dessauer HC, Gee GF and Rogers JS (1992). Allozyme evidence for crane systematics and polymorphisms within populations of Sandhill, Sarus, Siberian, and whooping cranes. Mol. Phylogenet. Evol. 1: 279-288. http://dx.doi.org/10.1016/1055-7903(92)90003-Y   Fain MG (2001). Phylogeny and evolution of cranes (Aves: Gruidae) inferred from DNA sequences of multiple genes. Ph.D. dissertation.   Fain MG, Krajewski C and Houde P (2007). Phylogeny of "core Gruiformes" (Aves: Grues) and resolution of the Limpkin- Sungrebe problem. Mol. Phylogenet. Evol. 43: 515-529. http://dx.doi.org/10.1016/j.ympev.2007.02.015 PMid:17419074   Frezal L and Leblois R (2008). Four years of DNA barcoding: current advances and prospects. Infect. Genet. Evol. 8: 727-736. http://dx.doi.org/10.1016/j.meegid.2008.05.005 PMid:18573351   Funk DJ and Omland KE (2003). Species-level paraphyly and polyphyly: Frequency, causes, and consequences, with insights from animal mitochondrial DNA. Annu. Rev. Ecol. Evol. Systemat. 34: 397-423. http://dx.doi.org/10.1146/annurev.ecolsys.34.011802.132421   Hackett SJ, Kimball RT, Reddy S, Bowie RC, et al. (2008). A phylogenomic study of birds reveals their evolutionary history. Science 320: 1763-1768. http://dx.doi.org/10.1126/science.1157704 PMid:18583609   Hajibabaei M, Singer GA, Clare EL and Hebert PD (2007). Design and applicability of DNA arrays and DNA barcodes in biodiversity monitoring. BMC Biol. 5: 24. http://dx.doi.org/10.1186/1741-7007-5-24 PMid:17567898 PMCid:1906742   Hebert PD, Cywinska A, Ball SL and deWaard JR (2003a). Biological identifications through DNA barcodes. Proc. Biol. Sci. 270: 313-321. http://dx.doi.org/10.1098/rspb.2002.2218 PMid:12614582 PMCid:1691236   Hebert PD, Ratnasingham S and deWaard JR (2003b). Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc. Biol. Sci. 270 (Suppl 1): S96-S99. http://dx.doi.org/10.1098/rsbl.2003.0025 PMid:12952648 PMCid:1698023   Hebert PD, Stoeckle MY, Zemlak TS and Francis CM (2004). Identification of Birds through DNA Barcodes. PLoS Biol. 2: e312. http://dx.doi.org/10.1371/journal.pbio.0020312 PMid:15455034 PMCid:518999   Hebert PD, deWaard JR and Landry JF (2010). DNA barcodes for 1/1000 of the animal kingdom. Biol. Lett. 6: 359-362. http://dx.doi.org/10.1098/rsbl.2009.0848 PMid:20015856 PMCid:2880045   Houde P, Cooper A, Leslie E, Strand AE, et al (1997). Phylogeny and Evolution of 12S rDNA in Gruiformes. In: Avian Molecular Evolution and Systematics (Mindell DP, ed.). Academic Press, San Diego, 121-158. http://dx.doi.org/10.1016/B978-012498315-1/50009-1   Kerr KC, Stoeckle MY and Dove CJ (2007). Comprehensive DNA barcode coverage of North American birds. Mol. Ecol. Notes 7: 535-543. http://dx.doi.org/10.1111/j.1471-8286.2007.01670.x PMid:18784793 PMCid:2259444   Kerr KC, Birks SM and Kalyakin MV (2009a). Filling the gap - COI barcode resolution in eastern Palearctic birds. Front. Zool. 6: 29. http://dx.doi.org/10.1186/1742-9994-6-29 PMid:20003213 PMCid:2796652   Kerr KC, Lijtmaer DA, Barreira AS, Hebert PD, et al. (2009b). Probing evolutionary patterns in neotropical birds through DNA barcodes. PLoS One 4: e4379. http://dx.doi.org/10.1371/journal.pone.0004379 PMid:19194495 PMCid:2632745   Kimura M (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120. http://dx.doi.org/10.1007/BF01731581 PMid:7463489   Krajewski C (1989). Phylogenetic relationships among cranes (Gruiformes: Gruidae) based on DNA hybridization. Auk 106: 603-618.   Krajewski C, Fain MG, Buckley L and King DG (1999). Dynamically heterogenous partitions and phylogenetic inference: an evaluation of analytical strategies with cytochrome b and ND6 gene sequences in cranes. Mol. Phylogenet. Evol. 13: 302-313. http://dx.doi.org/10.1006/mpev.1999.0646 PMid:10603258   Krajewski C, Sipiorski JT and Anderson FE (2010). Complete mitochondrial genomes and the phylogeny cranes (Gruiformes: Gruidae). Auk 127: 440-452. http://dx.doi.org/10.1525/auk.2009.09045   Kress WJ and Erickson DL (2008). DNA barcodes: genes, genomics, and bioinformatics. Proc. Natl. Acad. Sci. U. S. A. 105: 2761-2762. http://dx.doi.org/10.1073/pnas.0800476105 PMid:18287050 PMCid:2268532   Livezey BC (1989). Flightlessness in grebes (Aves, Podicipedidae): its independent evolution in three genera. Evolution 43: 29-54. http://dx.doi.org/10.2307/2409162   Livezey BC (1998). A phylogenetic analysis of the Gruiformes (Aves) based on morphological characters,with an emphasis on the rails (Rallidae). Philos. Trans. R. Soc. Lond. B Biol. Sci. 353: 2077-2151. http://dx.doi.org/10.1098/rstb.1998.0353 PMCid:1692427   Marshall E (2005). Taxonomy. Will DNA bar codes breathe life into classification? Science 307: 1037. http://dx.doi.org/10.1126/science.307.5712.1037 PMid:15718446   McKay BD and Zink RM (2010). The causes of mitochondrial DNA gene tree paraphyly in birds. Mol. Phylogenet. Evol. 54: 647-650. http://dx.doi.org/10.1016/j.ympev.2009.08.024 PMid:19716428   Park SH, Zhang Y, Piao H, Yu DH, et al. (2009). Use of cytochrome c oxidase subunit i (COI) nucleotide sequences for identification of the Korean Luciliinae fly species (Diptera: Calliphoridae) in forensic investigations. J. Korean Med. Sci. 24: 1058-1063. http://dx.doi.org/10.3346/jkms.2009.24.6.1058 PMid:19949660 PMCid:2775852   Pedersen N, Holyoak DT and Newton AE (2007). Systematics and morphological evolution within the moss family Bryaceae: a comparison between parsimony and Bayesian methods for reconstruction of ancestral character states. Mol. Phylogenet. Evol. 43: 891-907. http://dx.doi.org/10.1016/j.ympev.2006.10.018 PMid:17161629   Petersen JL, Bischof R, Krapu GL and Szalanski AL (2003). Genetic variation in the midcontinental population of sandhill cranes, Grus canadensis. Biochem. Genet. 41: 1-12. http://dx.doi.org/10.1023/A:1020985427461 PMid:12645869   Pleijel F, Jondelius U, Norlinder E, Nygren A, et al. (2008). Phylogenies without roots? A plea for the use of vouchers in molecular phylogenetic studies. Mol. Phylogenet. Evol. 48: 369-371. http://dx.doi.org/10.1016/j.ympev.2008.03.024 PMid:18424089   Ronquist F and Huelsenbeck JP (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574. http://dx.doi.org/10.1093/bioinformatics/btg180 PMid:12912839   Sambrook J and Russell DW (2001). 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J. Hered. 92: 371-373. http://dx.doi.org/10.1093/jhered/92.4.371 PMid:11535656   Yang R, Wu X, Yan P and Li X (2010a). Using DNA barcodes to identify a bird involved in a birdstrike at a Chinese airport. Mol. Biol. Rep. 37: 3517-3523. http://dx.doi.org/10.1007/s11033-009-9945-0 PMid:20033492   Yang R, Wu X, Yan P, Su X, et al. (2010b). Complete mitochondrial genome of Otis tarda (Gruiformes: Otididae) and phylogeny of Gruiformes inferred from mitochondrial DNA sequences. Mol. Biol. Rep. 37: 3057-3066. http://dx.doi.org/10.1007/s11033-009-9878-7 PMid:19823949   Yoo HS, Eah JY, Kim JS, Kim YJ, et al. (2006). DNA barcoding Korean birds. Mol. Cells 22: 323-327. PMid:17202861