Publications

Amutan M, Nyyssonen E, Stubbs J, Diaz-Torres MR, et al. (1996). Identification and cloning of a mobile transposon from Aspergillus niger var. awamori. Curr. Genet. 29: 468-473. http://dx.doi.org/10.1007/BF02221516 PMid:8625427   Ansari KI, Palacios N, Araya C, Langin T, et al. (2004). Pathogenic and genetic variability among Colletotrichum lindemuthianum isolates of different geographic origins. Plant. Pathol. 53: 635-642. http://dx.doi.org/10.1111/j.0032-0862.2004.01057.x   Ballance DJ (1986). Sequences important for gene expression in filamentous fungi. Yeast 2: 229-236. http://dx.doi.org/10.1002/yea.320020404 PMid:3333455   Banks GR, Shelton PA, Kanuga N, Holden DW, et al. (1993). The Ustilago maydis nar1 gene encoding nitrate reductase activity: sequence and transcriptional regulation. Gene 131: 69-78. http://dx.doi.org/10.1016/0378-1119(93)90670-X   Benton WD and Davis RW (1977). Screening lambdagt recombinant clones by hybridization to single plaques in situ. Science 196: 180-182. http://dx.doi.org/10.1126/science.322279 PMid:322279   Caddick MX, Peters D and Platt A (1994). Nitrogen regulation in fungi. Antonie Van Leeuwenhoek 65: 169-177. http://dx.doi.org/10.1007/BF00871943 PMid:7847882   Campbell WH and Kinghorn KR (1990). Functional domains of assimilatory nitrate reductases and nitrite reductases. Trends Biochem. Sci. 15: 315-319. http://dx.doi.org/10.1016/0968-0004(90)90021-3   Capy P, Gasperi G, Biemont C and Bazin C (2000). Stress and transposable elements: co-evolution or useful parasites? Heredity 85: 101-106. http://dx.doi.org/10.1046/j.1365-2540.2000.00751.x PMid:11012710   Casela CR and Frederiksen RA (1994). Pathogenic variation in monoconidial culture from a single lesion and monoconodial subcultures of the sorghum anthracnose fungus Colletotrichum graminicola. Trop. Plant Pathol. 19: 149-153.   Castro-Prado MA, Querol CB, Sant'Anna JR, Miyamoto CT, et al. (2007). Vegetative compatibility and parasexual segregation in Colletotrichum lindemuthianum, a fungal pathogen of the common bean. Genet. Mol. Res. 6: 634-642. PMid:18050083   Colletotrichum Sequencing Project, Broad Institute of Harvard and MIT (2011). Available at [http://www.broadinstitute. org/]. Accessed July, 2011.   Daboussi MJ and Capy P (2003). Transposable elements in filamentous fungi. Annu. Rev. Microbiol. 57: 275-299. http://dx.doi.org/10.1146/annurev.micro.57.030502.091029 PMid:14527280   Daboussi MJ, Langin T and Brygoo Y (1992). Fot1, a new family of fungal transposable elements. Mol. Gen. Genet. 232: 12-16. http://dx.doi.org/10.1007/BF00299131 PMid:1313143   Fávaro LCL, Araújo WL, Souza-Paccola EA, Azevedo JL, et al. (2007). Colletotrichum sublineolum genetic instability assessed by mutants resistents to chlorate. Mycol. Res. 111: 93-105. http://dx.doi.org/10.1016/j.mycres.2006.08.008 PMid:17158042   Feng B, Xiao X and Marzluf GA (1993). Recognition of specific nucleotide bases and cooperative DNA binding by the trans-acting nitrogen regulatory protein NIT2 of Neurospora crassa. Nucleic Acid Res. 21: 3989-3996. http://dx.doi.org/10.1093/nar/21.17.3989 PMid:8396761 PMCid:309984   Fu YH and Marzluf GA (1993). Nuclear DNA-binding which recognize nitrate reductase in Neurospora crassa. J. Bacteriol. 175: 2379-2392.   Galagan JE, Henn MR, Ma LJ, Cuomo CA, et al. (2005). Genomics of the fungal kingdom: insights into eukaryotic biology. Genome Res. 15: 1620-1631. http://dx.doi.org/10.1101/gr.3767105 PMid:16339359   Garde J, Kinghorn JR and Tomsett AB (1995). Site-directed mutagenesis of nitrate reductase from Aspergillus nidulans. Identification of some essential and some nonessential amino acids among conserved residues. J. Biol. Chem. 270: 6644-6650. http://dx.doi.org/10.1074/jbc.270.12.6644 PMid:7896804   Glayzer DC, Roberts IN, Archer DB and Oliver RP (1995). The isolation of Ant1, a transposable element from Aspergillus niger. Mol. Gen. Genet. 249: 432-438. http://dx.doi.org/10.1007/BF00287105 PMid:8552048   Haas H and Marzluf GA (1995). NRE, the major nitrogen regulatory protein of Penicillium chrysogenum, binds specifically to elements in the intergenic promoter regions of nitrate assimilation and penicillin biosynthetic gene clusters. Curr. Genet. 28: 177-183. http://dx.doi.org/10.1007/BF00315785 PMid:8590470   Haas H, Marx F, Graessle S and Stoffler G (1996). Sequence analysis and expression of the Penicillium chrysogenum nitrate reductase encoding gene (niaD). Biochim. Biophys. Acta 1309: 81-84. http://dx.doi.org/10.1016/S0167-4781(96)00150-9   Ishikawa FH, Souza EA, Read ND and Roca MG (2010). Live-cell imaging of conidial fusion in the bean pathogen, Colletotrichum lindemuthianum. Fungal Biol. 114: 2-9. http://dx.doi.org/10.1016/j.funbio.2009.11.006 PMid:20965055   Jargeat P, Gay G, Debaud JC and Marmeisse R (2000). Transcription of a nitrate reductase gene isolated from the symbiotic basidiomycete fungus Hebeloma cylindrosporum does not require induction by nitrate. Mol. Gen. Genet. 263: 948-956. http://dx.doi.org/10.1007/PL00008695 PMid:10954080   Langin T, Capy P and Daboussi MJ (1995). The transposable element impala, a fungal member of the Tc1-mariner superfamily. Mol. Gen. Genet. 246: 19-28. http://dx.doi.org/10.1007/BF00290129 PMid:7823909   Levis C, Fortini D and Brygoo Y (1997a). Transformation of Botrytis cinerea with the nitrate reductase gene (niaD) shows a high frequency of homologous recombination. Curr. Genet. 32: 157-162. http://dx.doi.org/10.1007/s002940050261 PMid:9294265   Levis C, Fortini D and Brygoo Y (1997b). Flipper, a mobile Fot1-like transposable element in Botrytis cinerea. Mol. Gen. Genet. 254: 674-680. http://dx.doi.org/10.1007/s004380050465 PMid:9202383   Marzluf GA (1997). Genetic regulation of nitrogen metabolism in the fungi. Microbiol. Mol. Biol. Rev. 61: 17-32. PMid:9106362 PMCid:232598   Maurer P, Rejasse A, Capy P, Langin T, et al. (1997). Isolation of the transposable element hupfer from the entomopathogenic fungus Beauveria bassiana by insertion mutagenesis of the nitrate reductase structural gene. Mol. Gen. Genet. 256: 195-202. http://dx.doi.org/10.1007/s004380050561 PMid:9349711   McClintock B (1984). The significance of responses of the genome to challenge. Science 226: 792-801. http://dx.doi.org/10.1126/science.15739260 PMid:15739260   Navarrete K, Roa A, Vaca I, Espinosa Y, et al. (2009). Molecular characterization of the niaD and pyrG genes from Penicillium camemberti, and their use as transformation markers. Cell Mol. Biol. Lett. 14: 692-702. http://dx.doi.org/10.2478/s11658-009-0028-y PMid:19562269   Okamoto PM, Fu YH and Marzluf GA (1991). Nit-3, the structural gene of nitrate reductase in Neurospora crassa: nucleotide sequence and regulation of mRNA synthesis and turnover. Mol. Gen. Genet. 227: 213-223. http://dx.doi.org/10.1007/BF00259673 PMid:1829499   Oliveira VC and Costa JLS (2003). Compatibilidade vegetativa de nit-mutantes de Fusarium solani patogênicos e não-patogênicos ao feijoeiro e à soja. Fitopatol. Bras. 28: 89-92. http://dx.doi.org/10.1590/S0100-41582003000100013   Pereira JF, de Queiroz MV, Lopes FJ, Rocha RB, et al. (2004). Characterization, regulation, and phylogenetic analyses of the Penicillium griseoroseum nitrate reductase gene and its use as selection marker for homologous transformation. Can. J. Microbiol. 50: 891-900. http://dx.doi.org/10.1139/w04-081 PMid:15644906   Perfect SE, Hughes HB, O'Connell RJ and Green JR (1999). Colletotrichum: A model genus for studies on pathology and fungal-plant interactions. Fungal Genet. Biol. 27: 186-198. http://dx.doi.org/10.1006/fgbi.1999.1143 PMid:10441444   Punt PJ, Strauss J, Smit R, Kinghorn JR, et al. (1995). The intergenic region between the divergently transcribed niiA and niaD genes of Aspergillus nidulans contains multiple NirA binding sites which act bidirectionally. Mol. Cell Biol. 15: 5688-5699. PMid:7565720 PMCid:230819   Rodríguez-Guerra R, Ramírez-Rueda MT, De La Veja OM and Simpson J (2003). Variation in genotype, pathotype and anastomosis groups of Colletotrichum lindemuthianum isolates from México. Plant Pathol. 52: 228-235. http://dx.doi.org/10.1046/j.1365-3059.2003.00808.x   Soares MA (2007). Genes Determinantes de Patogenicidade e Virulência e Análise Parcial do Genoma Mitocondrial de Colletotrichum lindemuthianum, Agente Causal da Antracnose do Feijoeiro Comum. Doctoral thesis, Universidade Federal de Viçosa, Viçosa.   Specht CA, DiRusso CC, Novotny CP and Ullrich RC (1982). A method for extracting high-molecular-weight deoxyribonucleic acid from fungi. Anal. Biochem. 119: 158-163. http://dx.doi.org/10.1016/0003-2697(82)90680-7   Yoder OC, Valent B and Chumley F (1986). Genetic nomenclature and practice for plant pathogenic fungi. Phytopatology 76: 383-385. http://dx.doi.org/10.1094/Phyto-76-383   Zhou J and Kleinhofs A (1996). Molecular evolution of nitrate reductase genes. J. Mol. Evol. 42: 432-442. http://dx.doi.org/10.1007/BF02498637 PMid:8642612

Alvarez-Ayala G and Schwartz HF (1979). Preliminary investigations of pathogenic variability expressed by Isariopsis griseola. Annu. Rep. Bean Improv. Coop. 22: 86-88.   Bayraktar H and Dolar FS (2010). Molecular identification and genetic diversity of Fusarium species associated with onion fields in Turkey. J. Phytopathol. 159: 28-34. http://dx.doi.org/10.1111/j.1439-0434.2010.01715.x   Chadha S and Gopalakrishna T (2005). Genetic diversity of Indian isolates of rice blast pathogen (Magnaporthe grisea) using molecular markers. Curr. Sci. 88: 1466-1469.   Crous PW, Liebenberg MM, Braun U and Groenewald JZ (2006). Re-evaluating the taxonomic status of Phaeoisariopsis griseola, the causal agent of angular leaf spot of bean. Stud. Mycol. 55: 163-173. http://dx.doi.org/10.3114/sim.55.1.163 PMid:18490977 PMCid:2104728   Douhan GW, Olsen MW, Herrell A, Winder C, et al. (2009). Genetic diversity of Labyrinthula terrestris, a newly emergent plant pathogen, and the discovery of new Labyrinthulid organisms. Mycol. Res. 113: 1192-1199. http://dx.doi.org/10.1016/j.mycres.2009.08.002 PMid:19682576   Faleiro FG, Nietsche S, Ragagnin VA, Borém A, et al. (2001). Resistência de cultivares de feijoeiro-comum à ferrugem e à mancha-angular em condições de casa de vegetação. Fitopatol. Bras. 26: 86-89. http://dx.doi.org/10.1590/S0100-41582001000100015   FAO (2008). Available at [http://apps.fao.org]. Accessed May 28, 2010.   Hill MO (1973). Diversity and evenness: a unifying notation and its consequences. Ecology 54: 427-432. http://dx.doi.org/10.2307/1934352   Lima SS, Abadio AK, Araujo EF, Kitajima EW, et al. (2010). Mycovirus in Pseudocercospora griseola, the causal agent of angular leaf spot in common bean. Can. J. Microbiol. 56: 359-365. http://dx.doi.org/10.1139/W10-022 PMid:20555397   Mahuku GS, Jara C, Cuasquer JB and Castellanos G (2002). Genetic variability within Phaeoisariopsis griseola from Central America and its implications for resistance breeding of common bean. Plant Pathol. 51: 594-604. http://dx.doi.org/10.1046/j.1365-3059.2002.00742.x   Meng X and Chen W (2001). Applications of AFLP and ISSR techniques in detecting genetic diversity in the soybean brown stem rot pathogen Phialophora gregata. Mycol. Res. 105: 936-940.   Motlagh MRS and Anvari M (2010). Genetic variation in a population of Bipolaris oryzae based on RAPD-PCR in north of Iran. Afr. J. Biotechnol. 9: 5800-5804.   Nei M (1973). Analysis of gene diversity in subdivided populations. Proc. Natl. Acad. Sci. U. S. A. 70: 3321-3323. http://dx.doi.org/10.1073/pnas.70.12.3321 PMid:4519626 PMCid:427228   Nei M (1987). Molecular Evolutionary Genetics. Columbia University Press, New York.   Pastor-Corrales MA and Jara CE (1995). La evolución de Phaeoisariopsis griseola con el frijol común en América Latina. Fitopatol. Colomb. 19: 15-22.   Reddy MP, Sarla N and Siddiq EA (2002). Inter simple sequence repeat (ISSR) polymorphism and its application in plant breeding. Euphytica 128: 9-17. http://dx.doi.org/10.1023/A:1020691618797   Rosenblum EB, Fisher MC, James TY, Stajich JE, et al. (2010). A molecular perspective: biology of the emerging pathogen Batrachochytrium dendrobatidis. Dis. Aquat. Organ. 92: 131-147. http://dx.doi.org/10.3354/dao02179 PMid:21268975   Samils B, Stepien V, Lagercrantz U, Lascoux M, et al. (2001). Genetic diversity in relation to sexual and asexual reproduction in populations of Melampsora larici-epitea. Eur. J. Plant Pathol. 107: 871-881. http://dx.doi.org/10.1023/A:1013121809990   Sartorato A (2004). Pathogenic variability and genetic diversity of Phaeoisariopsis griseola isolates from two counties in the State of Goias, Brazil. J. Phytopathol. 152: 385-390. http://dx.doi.org/10.1111/j.1439-0434.2004.00858.x   Sartorato A, Rava CA and Rios GP (1996). Doenças Fúngicas e Bacterianas da Parte Aérea. In: Cultura do Feijoeiro Comum no Brasil (Araújo RS, Rava CA, Stone LF and Zimmermann MJO, eds.). Piracicaba Potafós, Piracicaba, 669-700.   Stenglein SA and Balatti PA (2006). Genetic diversity of Phaeoisariopsis griseola in Argentina as revealed by pathogenic and molecular markers. Physiol. Mol. Plant Pathol. 68: 158-167. http://dx.doi.org/10.1016/j.pmpp.2006.10.001   Stenglein S, Ploper LD, Vizgarra O and Balatti P (2003). Angular leaf spot: a disease caused by the fungus Phaeoisariopsis griseola (Sacc.) Ferraris on Phaseolus vulgaris L. Adv. Appl. Microbiol. 52: 209-243. http://dx.doi.org/10.1016/S0065-2164(03)01009-8   Taylor JW and Berbee ML (2006). Dating divergences in the Fungal Tree of Life: review and new analyses. Mycologia 98: 838-849. http://dx.doi.org/10.3852/mycologia.98.6.838 PMid:17486961   Tymon AM and Pell JK (2005). ISSR, ERIC and RAPD techniques to detect genetic diversity in the aphid pathogen Pandora neoaphidis. Mycol. Res. 109: 285-293. http://dx.doi.org/10.1017/S0953756204001807 PMid:15912945   Vieira C, Paula Júnior TJ and Borém A (2006). Feijão. UFV, Viçosa.   Wolfe AD (2005). ISSR techniques for evolutionary biology. Methods Enzymol. 395: 134-144. http://dx.doi.org/10.1016/S0076-6879(05)95009-X   Yeh FC, Yang R and Boyle T (1999). POPGENE. Microsoft Window-Based Freeware for Population Genetic Analysis. Release 1.31. University of Alberta, Edmonton.   Zhong S and Steffenson BJ (2001). Virulence and Molecular Diversity in Cochliobolus sativus. Phytopathology 91: 469- 476. http://dx.doi.org/10.1094/PHYTO.2001.91.5.469 PMid:18943591   Zietkiewicz E, Rafalski A and Labuda D (1994). Genome fingerprinting by simple sequence repeat (SSR)-anchored polymerase chain reaction amplification. Genomics 20: 176-183. http://dx.doi.org/10.1006/geno.1994.1151 PMid:8020964