Publications

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2011
C. Medri, Ruas, E. A., Medri, M. E., Ruas, C. F., Sayhun, S., Medri, P. S., Silva, D. C. G., Bianchini, E., and Ruas, P. M., Genetic diversity and flooding survival in Aegiphila sellowiana (Lamiaceae), a typical tree species from upland riparian forests, vol. 10, pp. 1084-1091, 2011.
Bailey-Serres J and Voesenek LA (2008). Flooding stress: acclimations and genetic diversity. Annu. Rev. Plant Biol. 59: 313-339. doi:10.1146/annurev.arplant.59.032607.092752 PMid:18444902 Braendle R and Crawford RMM (1999). Plants as amphibians. Perspect. Plant Ecol. Evol. Syst. 2: 56-78. doi:10.1078/1433-8319-00065 Carvalho MCCG, Silva DCG, Ruas PM, Medri ME, et al. (2002). Flooding tolerance and genetic diversity in populations of Luehea divaricata. Biol. Plant. 52: 771-774. doi:10.1007/s10535-008-0150-0 Coelho ASG (2000). Dboot: Avaliação dos Erros Associados a Estimativas de Distâncias/Similaridade Genéticas Através do Procedimento de Bootstrap com Número Variável de Marcadores (Software). Universidade Federal de Goiás, Goiânia. Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15. Ferreira CS, Piedade MTF, Junk WJ and Parolin P (2007). Floodplain and upland populations of Amazonian Himatanthus sucuuba: effects of flooding on germination, seedling growth and mortality. Environ. Exp. Bot. 60: 477-483. doi:10.1016/j.envexpbot.2007.01.005 Ferreira CS, Piedade MTF, Franco AC, Gonçalves JFC, et al. (2009a). Adaptive strategies to tolerate prolonged flooding in seedlings of floodplain and upland populations of Himatanthus sucuuba, a Central Amazon tree. Aquatic. Bot. 90: 246-252. doi:10.1016/j.aquabot.2008.10.006 Ferreira CS, Piedade MT, Tine MA, Rossatto DR, et al. (2009b). The role of carbohydrates in seed germination and seedling establishment of Himatanthus sucuuba, an Amazonian tree with populations adapted to flooded and non-flooded conditions. Ann. Bot. 104: 1111-1119. doi:10.1093/aob/mcp212 PMid:19770164    PMCid:2766203 Jackson MB, Ishizawa K and Ito O (2009). Evolution and mechanisms of plant tolerance to flooding stress. Ann. Bot. 103: 137-142. doi:10.1093/aob/mcn242 PMCid:2707321 Krauss SL (2000). Accurate gene diversity estimates from amplified fragment length polymorphism (AFLP) markers. Mol. Ecol. 9: 1241-1245. doi:10.1046/j.1365-294x.2000.01001.x PMid:10972764 Lenssen JPM, Kleunen MV, Fischer M and Kroon H (2004). Local adaptation of the clonal plant Ranunculus reptans to flooding along a small-scale gradient. J. Ecol. 92: 696-706. doi:10.1111/j.0022-0477.2004.00895.x Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. PMid:17248844    PMCid:1213855 Peña-Fronteras JT, Villalobos MC, Baltazar AM, Merca FE, et al. (2009). Adaptation to flooding in upland and lowland ecotypes of Cyperus rotundus, a troublesome sedge weed of rice: tuber morphology and carbohydrate metabolism. Ann. Bot. 103: 295-302. doi:10.1093/aob/mcn085 PMid:18515404    PMCid:2707299 Rohlf FJ (2000). NTSYS-pc Numerical Taxonomy and Multivariate Analysis System Version 2.1. Owner Manual. Exeter Software, New York. Schneider S, Roessli D and Excoffier L (2000). ARLEQUIN: A Software for Population Genetic data Analysis, Version 2.0 (software). University of Geneva, Geneva. Silva DC, Carvalho MC, Ruas PM, Ruas CF, et al. (2010). Evidence of ecotypic differentiation between populations of the tree species Parapiptadenia rigida due to flooding. Genet. Mol. Res. 9: 797-810. doi:10.4238/vol9-2gmr736 PMid:20449813 Silva MES and Guetter AK (2003). Mudanças climáticas regionais observadas no estado do Paraná. Terra Livre 1: 111- 126. Tero N, Aspi J, Siikamaki P, Jakalaniemi A, et al. (2003). Genetic structure and gene flow in a metapopulation of an endangered plant species, Silene tatarica. Mol. Ecol. 12: 2073-2085. doi:10.1046/j.1365-294X.2003.01898.x PMid:12859630 Yeh FC, Yang RTJ and Xiyan JM (2000). PopGene32. Microsoft Window-based Freeware for Population Genetic Analysis, Version 1.32 (Software). University of Alberta, Edmonton. Zhivotovsky LA (1999). Estimating population structure in diploids with multilocus dominant DNA markers. Mol. Ecol. 8: 907-913. doi:10.1046/j.1365-294x.1999.00620.x PMid:10434412
2010
D. C. G. Silva, Carvalho, M. C. C. G., Ruas, P. M., Ruas, C. F., and Medri, M. E., Evidence of ecotypic differentiation between populations of the tree species Parapiptadenia rigida due to flooding, vol. 9, pp. 797-810, 2010.
Bailey-Serres J and Voesenek LA (2008). Flooding stress: acclimations and genetic diversity. Annu. Rev. Plant Biol. 59: 313-339. http://dx.doi.org/10.1146/annurev.arplant.59.032607.092752 PMid:18444902   Batista CUN, Medri ME, Bianchini E, Medri C, et al. (2008). Tolerância à inundação de Cecropia pachystachya Trec. (Cecropiaceae): aspectos ecofisiológicos e morfoanatômicos. Acta Bot. Bras. 22: 91-98. http://dx.doi.org/10.1590/S0102-33062008000100012   Chan JWY and Burton RS (1992). Variation in alcohol dehydrogenase activity and flood tolerance in white clover, Trifolium repens. Evolution 46: 721-734. http://dx.doi.org/10.2307/2409640   Coutts MP and Armstrong W (1976). Role of Oxygen Transport in the Tolerance of Trees to Waterlogging. In: Tree Physiology and Yield Improvement (Cannell MGR and Last FT, eds.). Academic Press, London, 361-385.   Davanso VM, Souza LA, Medri ME, Pimenta JA, et al. (2002). Photosynthesis, growth and development of Tabebuia avellanedae Lor. Ex Griseb. (Bignoniaceae) in flooded soil. Braz. Arch. Biol. Technol. 45: 375-384. http://dx.doi.org/10.1590/S1516-89132002000300016   Davanso VM, Medri ME, Souza LA and Colli S (2003). Tabebuia avellanedae Lor. ex Griseb. (Bignoniaceae) submitted at the flooding and the "Ethrel" and silver nitrate application. Braz. Arch. Biol. Technol. 46: 57-64. http://dx.doi.org/10.1590/S1516-89132003000100010   De Carvalho MCCG, Silva DCG, Ruas PM, Medri ME, et al. (2008). Flooding tolerance and genetic diversity in populations of Luehea divaricata. Biol. Plant. 52: 771-774. http://dx.doi.org/10.1007/s10535-008-0150-0   Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytotech. Bull. 19: 11-15.   Excoffier L, Smouse PE and Quattro JM (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491. PMid:1644282 PMCid:1205020   Fernández MD (2006). Changes in photosynthesis and fluorescence in response to flooding in emerged and submerged leaves of Pouteria orinocoensis. Photosynthetica 44: 32-38. http://dx.doi.org/10.1007/s11099-005-0155-2   Ferreira CS, Piedade MTF, Junk WJ and Parolin P (2007). Floodplain and upland populations of Amazonian Himatanthus sucuuba: effects of flooding on germination, seedling growth and mortality. Environ. Exp. Bot. 60: 477-483. http://dx.doi.org/10.1016/j.envexpbot.2007.01.005   Huang B, Johnson JW, Box JE and NeSmith DS (1997). Root characteristics and hormone activity of wheat in response to hypoxia and ethylene. Crop Sci. 37: 812-818. http://dx.doi.org/10.2135/cropsci1997.0011183X003700030020x   Huff DR, Peakall R and Smouse PE (1993). RAPD variation within and among natural populations of outcrossing buffalograss [Buchloë dactyloides (Nutt.) Engelm.]. Theor. Appl. Genet. 86: 927-934. http://dx.doi.org/10.1007/BF00211043   Kolb RM, Medri ME, Bianchini E and Pimenta JA (1998). Anatomia ecológica de Sebastiania commersoniana (Baillon) Smith & Downs (Euphorbiaceae) submetida ao alagamento. Rev. Bras. Bot. [online] 21. [Doi: 10.1590/S0100- 84041998000300010].   Kolb RM, Rawyler A and Braendle R (2002). Parameters affecting the early seedling development of four Neotropical trees under oxygen deprivation stress. Ann. Bot. 89: 551-558. http://dx.doi.org/10.1093/aob/mcf092   Kozlowski TT (1984). Responses of Woody Plants to Flooding. In: Flooding and Plant Growth (Kozlowski TT, ed.). Academic Press, London, 129-163. PMid:6462805   Lenssen JPM, Kleunen MV, Fischer M and Kroon H (2004). Local adaptation of the clonal plant Ranunculus reptans to flooding along a small-scale gradient. J. Ecol. 92: 696-706. http://dx.doi.org/10.1111/j.0022-0477.2004.00895.x   Lopez OR and Kursar TA (1999). Flood tolerance of four tropical tree species. Tree Physiol. 19: 925-932. http://dx.doi.org/10.1093/treephys/19.14.925 PMid:12651304   Lopez OR and Kursar TA (2003). Does flood tolerance explain tree species distribution in tropical seasonally flooded habitats? Oecologia 136: 193-204. http://dx.doi.org/10.1007/s00442-003-1259-7 PMid:12743794   Lorenzi H (1992). Árvores Brasileiras: Manual de identificação e Cultivo de Plantas Arbóreas Nativas do Brasil. Plantarum, Nova Odessa, 181.   Lynch M and Milligan BG (1994). Analysis of population genetic structure with RAPD markers. Mol. Ecol. 3: 91-99. http://dx.doi.org/10.1111/j.1365-294X.1994.tb00109.x PMid:8019690   Mano Y, Omori F, Takamizo T, Kindiger B, et al. (2006). Variation for root aerenchyma formation in flooded and non-flooded maize and teosinte seedlings. Plant Soil 281: 269-279. http://dx.doi.org/10.1007/s11104-005-4268-y   Medri ME, Bianchini E, Pimenta JA, Delgado MT, et al. (1998). Aspectos morfo-anatômicos e fisiológicos de Peltophorum dubium (Spr.) Taub. submetida ao alagamento e à aplicação de etrel. Rev. Bras. Bot. 21: 261-267. http://dx.doi.org/10.1590/S0100-84041998000300004   Medri ME, Bianchini E, Pimenta JA, Colli S, et al. (2002). Studies on Flooding Tolerance in Native Tree Species From Tibagi River Basin. In: A Bacia do Rio Tibagi (Medri ME, Bianchini E, Shibatta OA and Pimenta JA, eds.). Universidade Estadual de Londrina, Londrina, 133-172.   Medri ME, Ferreira AC, Kolb RM, Bianchini E, et al. (2007). Morpho-anatomical alterations in plants of Lithraea molleoides (Vell.) Engl. submitted to flooding. Acta Sci. Biol. Sci. 29: 15-22. http://dx.doi.org/10.4025/actascibiolsci.v29i1.408   Mielke MS, Almeida AA, Gomes FP, Mangabeira PAO, et al. (2005). Effects of soil flooding on leaf gas exchange and growth of two Neotropical pioneer tree species. New Forests 29: 161-168. http://dx.doi.org/10.1007/s11056-005-0247-7   Parolin P (2002). Life history and environment of Cecropia latiloba in Amazonian floodplains. Rev. Biol. Trop. 50: 531-545. PMid:12298284   Parolin P (2009). Submerged in darkness: adaptations to prolonged submergence by woody species of the Amazonian floodplains. Ann. Bot. 103: 359-376. http://dx.doi.org/10.1093/aob/mcn216 PMid:19001429 PMCid:2707320   Pimenta JA, Medri ME, Bianchini E, Müller C, et al. (1996). Aspectos da morfoanatomia e fisiologia de Jacaranda puberula Cham. (Bignoniaceae) em condições de hipoxia. Rev. Bras. Bot. 19: 215-220.   Pimenta JA, Bianchini E and Medri ME (1998). Adaptations to flooding by tropical trees: morphological and anatomical modifications. In: Ecophysiological strategies of xerophytic and amphibious plants in the Neotropics (Scarano FR and Franco AC, eds.). Universidade Federal do Rio de Janeiro, Rio de Janeiro, 157-176.   Pisicchio CM (2004). Respostas de Heliocarpus americanus L. (Tiliciaceae) ao Alagamento. Master's thesis, Universidade Estadual de Londrina, Londrina.   Santiago EF and Paoli AAS (2003). O aumento em superfície em Adelia membranifolia (Müll. Arg.) Pax & K. Hoffm. e Peltophorum dubium (Spreng.) Taub., em resposta ao estresse por deficiência nutricional e alagamento do substrato. Rev. Bras. Bot. 26: 503-513. http://dx.doi.org/10.1590/S0100-84042003000400009   Schmull M and Thomas FM (2000). Morphological and physiological reactions of young deciduous trees (Quercus robur L., Q. petraea [Matt.] Liebl., Fagus sylvatica L.) to waterlogging. Plant Soil 225: 227-242. http://dx.doi.org/10.1023/A:1026516027096   Schneider S, Kueffer JM, Roessli D and Excoffier L (1997). Arlequin Version 1.1: A Software for Population Genetic Data Analysis. University of Geneva, Geneva.   Silveira SR, Ruas PM, Ruas CF, Carvalho VP, et al. (2003). Assessment of genetic variability within and among coffee progenies and cultivars using RAPD markers. Gen. Mol. Biol. 26: 329-336. http://dx.doi.org/10.1590/S1415-47572003000300018   Steege HT (1994). Flooding and drought tolerance in seeds and seedlings of two Mora species segregated along a soil hydrological gradient in the tropical rain forest of Guyana. Oecologia 100: 356-367. http://dx.doi.org/10.1007/BF00317856   Terazawa K and Kikuzawa K (1994). Effects of flooding on leaf dynamics and other seedling responses in flood-tolerant Alnus japonica and flood-intolerant Betula platyphylla var. japonica. Tree Physiol. 14: 251-261. http://dx.doi.org/10.1093/treephys/14.3.251 PMid:14967700   Tsukahara H and Kozlowski TT (1985). Importance of adventitious roots to growth of flooded Platanus occidentalis seedlings. Plant Soil 88: 123-132. http://dx.doi.org/10.1007/BF02140671   Yamamoto F (1992). Effects of depth of flooding on growth and anatomy of stems and knee roots of Taxodium distichum. Iawa Bull. 13: 93-104.