Publications
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“Plasticity of Corynebacterium diphtheriae pathogenicity islands revealed by PCR”, vol. 10. pp. 1290-1294, 2011.
, Ben ZN, Gautier M, Andonov R, Lavenier D, et al. (2004). GenoFrag: software to design primers optimized for whole genome scanning by long-range PCR amplification. Nucleic Acids Res. 32: 17-24.
doi:10.1093/nar/gkg928
PMid:14704339 PMCid:373259
Ben ZN, Grimaldi C, Gautier M, Langella P, et al. (2006). Testing of a whole genome PCR scanning approach to identify genomic variability in four different species of lactic acid bacteria. Res. Microbiol. 157: 386-394.
doi:10.1016/j.resmic.2005.09.006
PMid:16300933
Brown JS, Gilliland SM, Ruiz-Albert J and Holden DW (2002). Characterization of pit, a Streptococcus pneumoniae iron uptake ABC transporter. Infect. Immun. 70: 4389-4398.
doi:10.1128/IAI.70.8.4389-4398.2002
PMid:12117949 PMCid:128127
Dobrindt U and Hacker J (2001). Whole genome plasticity in pathogenic bacteria. Curr. Opin. Microbiol. 4: 550-557.
doi:10.1016/S1369-5274(00)00250-2
Enkavi G and Tajkhorshid E (2010). Simulation of spontaneous substrate binding revealing the binding pathway and mechanism and initial conformational response of GlpT. Biochemistry 49: 1105-1114.
doi:10.1021/bi901412a
PMid:20058936 PMCid:2829668
Frunzke J, Engels V, Hasenbein S, Gatgens C, et al. (2008). Co-ordinated regulation of gluconate catabolism and glucose uptake in Corynebacterium glutamicum by two functionally equivalent transcriptional regulators, GntR1 and GntR2. Mol. Microbiol. 67: 305-322.
doi:10.1111/j.1365-2958.2007.06020.x
PMid:18047570 PMCid:2230225
Gal-Mor O and Finlay BB (2006). Pathogenicity islands: a molecular toolbox for bacterial virulence. Cell Microbiol. 8: 1707-1719.
doi:10.1111/j.1462-5822.2006.00794.x
PMid:16939533
Hsiao WW, Ung K, Aeschliman D, Bryan J, et al. (2005). Evidence of a large novel gene pool associated with prokaryotic genomic islands. PLoS Genet. 1: e62.
doi:10.1371/journal.pgen.0010062
PMid:16299586 PMCid:1285063
Ishige T, Krause M, Bott M, Wendisch VF, et al. (2003). The phosphate starvation stimulon of Corynebacterium glutamicum determined by DNA microarray analyses. J. Bacteriol. 185: 4519-4529.
doi:10.1128/JB.185.15.4519-4529.2003
PMid:12867461 PMCid:165763
Iwaki M, Komiya T, Yamamoto A, Ishiwa A, et al. (2010). Genome organization and pathogenicity of Corynebacterium diphtheriae C7(-) and PW8 strains. Infect. Immun. 78: 3791-3800.
doi:10.1128/IAI.00049-10
PMid:20547743 PMCid:2937438
Karaolis DK, Johnson JA, Bailey CC, Boedeker EC, et al. (1998). A Vibrio cholerae pathogenicity island associated with epidemic and pandemic strains. Proc. Natl. Acad. Sci. U. S. A. 95: 3134-3139.
doi:10.1073/pnas.95.6.3134
Kauser F, Khan AA, Hussain MA, Carroll IM, et al. (2004). The cag pathogenicity island of Helicobacter pylori is disrupted in the majority of patient isolates from different human populations. J. Clin. Microbiol. 42: 5302-5308.
doi:10.1128/JCM.42.11.5302-5308.2004
PMid:15528729 PMCid:525253
Mattos-Guaraldi AL, Moreira LO, Damasco PV and Hirata JR (2003). Diphtheria remains a threat to health in the developing world - an overview. Mem. Inst. Oswaldo Cruz 98: 987-993.
doi:10.1590/S0074-02762003000800001
Nakao H, Pruckler JM, Mazurova IK, Narvskaia OV, et al. (1996). Heterogeneity of diphtheria toxin gene, tox, and its regulatory element, dtxR, in Corynebacterium diphtheriae strains causing epidemic diphtheria in Russia and Ukraine. J. Clin. Microbiol. 34: 1711-1716.
PMid:8784575 PMCid:229100
Popovic T, Mazurova IK, Efstratiou A, Vuopio-Varkila J, et al. (2000). Molecular epidemiology of diphtheria. J. Infect. Dis. 181 (Suppl 1): S168-S177.
doi:10.1086/315556
PMid:10657209
Pratt JT, Ismail AM and Camilli A (2010). PhoB regulates both environmental and virulence gene expression in Vibrio cholerae. Mol. Microbiol. 77: 1595-1605.
doi:10.1111/j.1365-2958.2010.07310.x
PMid:20659293
Sambrook J, Fritsch EF and Maniatis T (1989). Molecular Cloning: A Laboratory Manual. 2nd edn. Cold Spring Harbor, Cold Spring Harbor Laboratory, New York.
Sharma NC, Banavaliker JN, Ranjan R and Kumar R (2007). Bacteriological & epidemiological characteristics of diphtheria cases in & around Delhi - a retrospective study. Indian J. Med. Res. 126: 545-552.
PMid:18219082
Tumapa S, Holden MT, Vesaratchavest M, Wuthiekanun V, et al. (2008). Burkholderia pseudomallei genome plasticity associated with genomic island variation. BMC Genom. 9: 190.
doi:10.1186/1471-2164-9-190
PMid:18439288 PMCid:2386483
Yoshida Y, Sugiyama S, Oyamada T, Yokoyama K, et al. (2010). Identification and characterization of novel phosphate regulon genes, ecs0540-ecs0544, in Escherichia coli O157:H7. Mol. Genet. Genom. 284: 197-205.
doi:10.1007/s00438-010-0559-y
PMid:20640580