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“Genome-wide identification, phylogeny and expression analysis of the lipoxygenase gene family in cucumber”, vol. 10, pp. 2613-2636, 2011.
, Acosta IF, Laparra H, Romero SP, Schmelz E, et al. (2009). Tasselseed1 is a lipoxygenase affecting jasmonic acid signaling in sex determination of maize. Science 323: 262-265.
http://dx.doi.org/10.1126/science.1164645
PMid:19131630
Altschul SF, Madden TL, Schaffer AA, Zhang J, et al. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
http://dx.doi.org/10.1093/nar/25.17.3389
PMid:9254694 PMCid:146917
Bailey TL and Elkan C (1994). Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc. Int. Conf. Intell. Syst. Mol. Biol. 2: 28-36.
PMid:7584402
Bannenberg G, Martinez M, Hamberg M and Castresana C (2009). Diversity of the enzymatic activity in the lipoxygenase gene family of Arabidopsis thaliana. Lipids 44: 85-95.
http://dx.doi.org/10.1007/s11745-008-3245-7
PMid:18949503
Bell E, Creelman RA and Mullet JE (1995). A chloroplast lipoxygenase is required for wound-induced jasmonic acid accumulation in Arabidopsis. Proc. Natl. Acad. Sci. U. S. A. 92: 8675-8679.
http://dx.doi.org/10.1073/pnas.92.19.8675
Cannon SB, Mitra A, Baumgarten A, Young ND, et al. (2004). The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana. BMC Plant Biol. 4: 10.
http://dx.doi.org/10.1186/1471-2229-4-10
PMid:15171794 PMCid:446195
Chen G, Hackett R, Walker D, Taylor A, et al. (2004). Identification of a specific isoform of tomato lipoxygenase (TomloxC) involved in the generation of fatty acid-derived flavor compounds. Plant Physiol. 136: 2641-2651.
http://dx.doi.org/10.1104/pp.104.041608
PMid:15347800 PMCid:523329
Chen XS, Kurre U, Jenkins NA, Copeland NG, et al. (1994). cDNA cloning, expression, mutagenesis of C-terminal isoleucine, genomic structure, and chromosomal localizations of murine 12-lipoxygenases. J. Biol. Chem. 269: 13979-13987.
PMid:8188678
Corpet F (1988). Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 16: 10881-10890.
http://dx.doi.org/10.1093/nar/16.22.10881
PMid:2849754 PMCid:338945
Defilippi BG, Dandekar AM and Kader AA (2005). Relationship of ethylene biosynthesis to volatile production, related enzymes, and precursor availability in apple peel and flesh tissues. J. Agric. Food Chem. 53: 3133-3141.
http://dx.doi.org/10.1021/jf047892x
PMid:15826070
Felsenstein J (1989). PHYLIP: Phylogeny Inference Package (Version 3.2). Cladistics, 164-166.
Feussner I and Wasternack C (2002). The lipoxygenase pathway. Annu. Rev. Plant Biol. 53: 275-297.
http://dx.doi.org/10.1146/annurev.arplant.53.100301.135248
PMid:12221977
Feussner I, Kühn H and Wasternack C (2001). Lipoxygenase-dependent degradation of storage lipids. Trends Plant Sci. 6: 268-273.
http://dx.doi.org/10.1016/S1360-1385(01)01950-1
Gao X, Starr J, Gobel C, Engelberth J, et al. (2008). Maize 9-lipoxygenase ZmLOX3 controls development, root-specific expression of defense genes, and resistance to root-knot nematodes. Mol. Plant Microbe Interact. 21: 98-109.
http://dx.doi.org/10.1094/MPMI-21-1-0098
PMid:18052887
Grechkin AN, Kuramshin RA, Latypov SK, Safonova YY, et al. (1991). Hydroperoxides of alpha-ketols. Novel products of the plant lipoxygenase pathway. Eur. J. Biochem. 199: 451-457.
http://dx.doi.org/10.1111/j.1432-1033.1991.tb16143.x
PMid:1906404
Hall TA (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/ NT. Nucleic Acids Symp. Ser. 41: 95-98. 41: 95-98.
He Y, Fukushige H, Hildebrand DF and Gan S (2002). Evidence supporting a role of jasmonic acid in Arabidopsis leaf senescence. Plant Physiol. 128: 876-884.
http://dx.doi.org/10.1104/pp.010843
PMid:11891244 PMCid:152201
Howe GA and Schilmiller AL (2002). Oxylipin metabolism in response to stress. Curr. Opin. Plant Biol. 5: 230-236.
http://dx.doi.org/10.1016/S1369-5266(02)00250-9
Huang S, Li R, Zhang Z, Li L, et al. (2009). The genome of the cucumber, Cucumis sativus L. Nat. Genet. 41: 1275-1281.
http://dx.doi.org/10.1038/ng.475
PMid:19881527
Kolomiets MV, Hannapel DJ, Chen H, Tymeson M, et al. (2001). Lipoxygenase is involved in the control of potato tuber development. Plant Cell 13: 613-626.
PMid:11251100 PMCid:135504
Larkin MA, Blackshields G, Brown NP, Chenna R, et al. (2007). Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948.
http://dx.doi.org/10.1093/bioinformatics/btm404
PMid:17846036
Letunic I, Copley RR, Schmidt S, Ciccarelli FD, et al. (2004). SMART 4.0: towards genomic data integration. Nucleic Acids Res. 32: D142-D144.
http://dx.doi.org/10.1093/nar/gkh088
PMid:14681379 PMCid:308822
Liavonchanka A and Feussner I (2006). Lipoxygenases: occurrence, functions and catalysis. J. Plant Physiol. 163: 348- 357.
http://dx.doi.org/10.1016/j.jplph.2005.11.006
PMid:16386332
Matsui K, Hijiya K, Tabuchi Y and Kajiwara T (1999). Cucumber cotyledon lipoxygenase during postgerminative growth. Its expression and action on lipid bodies. Plant Physiol. 119: 1279-1288.
http://dx.doi.org/10.1104/pp.119.4.1279
PMid:10198086 PMCid:32012
Matsui K, Minami A, Hornung E, Shibata H, et al. (2006). Biosynthesis of fatty acid derived aldehydes is induced upon mechanical wounding and its products show fungicidal activities in cucumber. Phytochemistry 67: 649-657.
http://dx.doi.org/10.1016/j.phytochem.2006.01.006
PMid:16497344
Melan MA, Dong X, Endara ME, Davis KR, et al. (1993). An Arabidopsis thaliana lipoxygenase gene can be induced by pathogens, abscisic acid, and methyl jasmonate. Plant Physiol. 101: 441-450.
http://dx.doi.org/10.1104/pp.101.2.441
PMid:7506426 PMCid:160590
Minor W, Steczko J, Bolin JT, Otwinowski Z, et al. (1993). Crystallographic determination of the active site iron and its ligands in soybean lipoxygenase L-1. Biochemistry 32: 6320-6323.
http://dx.doi.org/10.1021/bi00076a003
PMid:8518276
Nicholas KB, Hugh BN Jr and David WD (1997). GeneDoc: analysis and visualization of genetic variation. Embnew News 4: 14.
Page RD (1996). TreeView: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12: 357-358.
PMid:8902363
Perez AG, Sanz C, Olias R and Olias JM (1999). Lipoxygenase and hydroperoxide lyase activities in ripening strawberry fruits. J. Agric. Food Chem. 47: 249-253.
http://dx.doi.org/10.1021/jf9807519
Rudolph M, Schlereth A, Korner M, Feussner K et al. (2010). The lipoxygenase-dependent oxygenation of lipid body membranes is promoted by a patatin-type phospholipase in cucumber cotyledons. J. Exp. Bot. 62: 749-760.
http://dx.doi.org/10.1093/jxb/erq310
PMid:21081663 PMCid:3003817
Schneider C, Pratt DA, Porter NA and Brash AR (2007). Control of oxygenation in lipoxygenase and cyclooxygenase catalysis. Chem. Biol. 14: 473-488.
http://dx.doi.org/10.1016/j.chembiol.2007.04.007
Shibata D, Steczko J, Dixon JE, Hermodson M, et al. (1987). Primary structure of soybean lipoxygenase-1. J. Biol. Chem. 262: 10080-10085.
PMid:3112136
Shibata D, Steczko J, Dixon JE, Andrews PC, et al. (1988). Primary structure of soybean lipoxygenase L-2. J. Biol. Chem. 263: 6816-6821.
PMid:2834391
Steczko J, Donoho GP, Clemens JC, Dixon JE, et al. (1992). Conserved histidine residues in soybean lipoxygenase: functional consequences of their replacement. Biochemistry 31: 4053-4057.
http://dx.doi.org/10.1021/bi00131a022
PMid:1567851
Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599.
http://dx.doi.org/10.1093/molbev/msm092
PMid:17488738
Tanurdzic M and Banks JA (2004). Sex-determining mechanisms in land plants. Plant Cell 16 Suppl: S61-S71.
http://dx.doi.org/10.1105/tpc.016667
PMid:15084718 PMCid:2643385
Wang R, Shen W, Liu L, Jiang L, et al. (2008). A novel lipoxygenase gene from developing rice seeds confers dual position specificity and responds to wounding and insect attack. Plant Mol. Biol. 66: 401-414.
http://dx.doi.org/10.1007/s11103-007-9278-0
PMid:18185911
Zhang B, Chen K, Bowen J, Allan A, et al. (2006). Differential expression within the LOX gene family in ripening kiwifruit. J. Exp. Bot. 57: 3825-3836.
http://dx.doi.org/10.1093/jxb/erl151
PMid:17032731
Zhou G, Qi J, Ren N, Cheng J, et al. (2009). Silencing OsHI-LOX makes rice more susceptible to chewing herbivores, but enhances resistance to a phloem feeder. Plant J. 60: 638-648.
http://dx.doi.org/10.1111/j.1365-313X.2009.03988.x
PMid:19656341