Publications

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2012
W. - Q. Zhang and Zhang, M. - H., Phylogeny and evolution of Cervidae based on complete mitochondrial genomes, vol. 11, pp. 628-635, 2012.
Amato G, Egan M and Schaller GB (2000). Mitochondrial Variation in Muntjac: Evidence for Discovery, Rediscovery, and Phylogenetic Relationships. In: Antelopes, Deer, and Relatives. Fossil Record, Behavioral Ecology, Systematics, and Conservation (Vrba E and Schaller GB, eds.). Yale University Press, New Haven and London, 285-295. Bouvrain PG, Geraads D and Jehenne Y (1989). Nouvelles données relatives à la classification des Cervidae (Artiodactyla, Mammalia). Zool. Anz. 223: 82-90. Chan YC, Roos C, Inoue-Murayama M, Inoue E, et al. (2010). Mitochondrial genome sequences effectively reveal the phylogeny of Hylobates gibbons. PLoS One 5: e14419. http://dx.doi.org/10.1371/journal.pone.0014419 PMid:21203450    PMCid:3009715 Dong W, Pan Y and Liu J (2004). The earliest Muntiacus (Artiodactyla, Mammalia) from the Late Miocene of Yuanmou, southwestern China. C. R. Palevol. 3: 379-386. http://dx.doi.org/10.1016/j.crpv.2004.06.002 Douzery E and Randi E (1997). The mitochondrial control region of Cervidae: evolutionary patterns and phylogenetic content. Mol. Biol. Evol. 14: 1154-1166. http://dx.doi.org/10.1093/oxfordjournals.molbev.a025725 PMid:9364773 Drummond AJ and Rambaut A (2007). BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol. Biol. 7: 214. http://dx.doi.org/10.1186/1471-2148-7-214 PMid:17996036    PMCid:2247476 Flegontov P, Gray MW, Burger G and Lukes J (2011). Gene fragmentation: a key to mitochondrial genome evolution in Euglenozoa? Curr. Genet. 57: 225-232. http://dx.doi.org/10.1007/s00294-011-0340-8 PMid:21544620 Gilbert C, Ropiquet A and Hassanin A (2006). Mitochondrial and nuclear phylogenies of Cervidae (Mammalia, Ruminantia): Systematics, morphology, and biogeography. Mol. Phylogenet. Evol. 40: 101-117. http://dx.doi.org/10.1016/j.ympev.2006.02.017 PMid:16584894 Grande C, Templado J and Zardoya R (2008). Evolution of gastropod mitochondrial genome arrangements. BMC Evol. Biol. 8: 61. http://dx.doi.org/10.1186/1471-2148-8-61 PMid:18302768    PMCid:2291457 Grubb P (1993). Mammal Species of the World: A Taxonomic and Geographic Reference (Wilson DE and Reeder DM, eds.). Smithsonian Institution Press, Washington and London, 384-392. Hassanin A and Douzery EJ (2003). Molecular and morphological phylogenies of ruminantia and the alternative position of the moschidae. Syst. Biol. 52: 206-228. http://dx.doi.org/10.1080/10635150390192726 PMid:12746147 Hundertmark KJ and Bowyer RT (2004). Genetics, evolution, and phylogeography of moose. Alces 40: 103-122. Hundertmark KJ, Shields GF, Udina IG, Bowyer RT, et al. (2002). Mitochondrial phylogeography of moose (Alces alces): late pleistocene divergence and population expansion. Mol. Phylogenet. Evol. 22: 375-387. http://dx.doi.org/10.1006/mpev.2001.1058 PMid:11884162 Kan XZ, Yang JK, Li XF, Chen L, et al. (2010). Phylogeny of major lineages of galliform birds (Aves: Galliformes) based on complete mitochondrial genomes. Genet. Mol. Res. 9: 1625-1633. http://dx.doi.org/10.4238/vol9-3gmr898 PMid:20730714 Krajewski C, Sipiorski JT and Anderson FE (2010). Complete mitochondrial genome sequences and the phylogeny of cranes (Gruiformes: Gruidae). Auk 127: 440-452. http://dx.doi.org/10.1525/auk.2009.09045 Kuwayama R and Ozawa T (2000). Phylogenetic relationships among european red deer, wapiti, and sika deer inferred from mitochondrial DNA sequences. Mol. Phylogenet. Evol. 15: 115-123. http://dx.doi.org/10.1006/mpev.1999.0731 PMid:10764539 Larkin MA, Blackshields G, Brown NP, Chenna R, et al. (2007). Clustal W and Clustal X version 2.0. Bioinformatics 23: 2947-2948. http://dx.doi.org/10.1093/bioinformatics/btm404 PMid:17846036 Li YP, Song W, Shi SL, Liu YQ, et al. (2010). Mitochondrial genome nucleotide substitution pattern between domesticated silkmoth, Bombyx mori, and its wild ancestors, Chinese Bombyx mandarina and Japanese Bombyx mandarina. Genet. Mol. Biol. 33: 186-189. http://dx.doi.org/10.1590/S1415-47572009005000108 PMid:21637625    PMCid:3036069 Ludt CJ, Schroeder W, Rottmann O and Kuehn R (2004). Mitochondrial DNA phylogeography of red deer (Cervus elaphus). Mol. Phylogenet. Evol. 31: 1064-1083. http://dx.doi.org/10.1016/j.ympev.2003.10.003 PMid:15120401 McDevitt AD, Edwards CJ, O’Toole P, O’Sullivan P, et al. (2009). Genetic structure of, and hybridisation between, red (Cervus elaphus) and sika (Cervus nippon) deer in Ireland. Mamm. Biol. - Zeitschrift für Säugetierkunde 74: 263-273. Md-Zain BM, Mohamad M, Ernie-Muneerah MA, Ampeng A, et al. (2010). Phylogenetic relationships of Malaysian monkeys, Cercopithecidae, based on mitochondrial cytochrome c sequences. Genet. Mol. Res. 9: 1987-1996. http://dx.doi.org/10.4238/vol9-4gmr942 PMid:20927717 Morin PA, Archer FI, Foote AD, Vilstrup J, et al. (2010). Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species. Genome Res. 20: 908-916. http://dx.doi.org/10.1101/gr.102954.109 PMid:20413674    PMCid:2892092 Pitra C, Fickel J, Meijaard E and Groves PC (2004). Evolution and phylogeny of old world deer. Mol. Phylogenet. Evol. 33: 880-895. http://dx.doi.org/10.1016/j.ympev.2004.07.013 PMid:15522810 Polziehn RO and Strobeck C (2002). A phylogenetic comparison of red deer and wapiti using mitochondrial DNA. Mol. Phylogenet. Evol. 22: 342-356. http://dx.doi.org/10.1006/mpev.2001.1065 PMid:11884159 Randi E, Mucci N, Pierpaoli M and Douzery E (1998). New phylogenetic perspectives on the Cervidae (Artiodactyla) are provided by the mitochondrial cytochrome b gene. Proc. R. Soc. Lond. B 265: 793-801. http://dx.doi.org/10.1098/rspb.1998.0362 PMid:9628037    PMCid:1689037 Ronquist F and Huelsenbeck JP (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574. http://dx.doi.org/10.1093/bioinformatics/btg180 PMid:12912839 Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599. http://dx.doi.org/10.1093/molbev/msm092 PMid:17488738