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2012
P. Choudhary, Khanna, S. M., Jain, P. K., Bharadwaj, C., Kumar, J., Lakhera, P. C., and Srinivasan, R., Genetic structure and diversity analysis of the primary gene pool of chickpea using SSR markers, vol. 11, pp. 891-905, 2012.
Choudhary S, Sethy NK, Shokeen B and Bhatia S (2006). Development of sequence-tagged microsatellites site markers for chickpea (Cicer arietinum L.). Mol. Ecol. Notes 6: 93-95. http://dx.doi.org/10.1111/j.1471-8286.2005.01150.x Chowdhury MA, Vandenberg V and Warkentin T (2002). Cultivar identification and genetic relationship among selected breeding lines and cultivars in chickpea (Cicer arietinum L.). Euphytica 127: 317-325. http://dx.doi.org/10.1023/A:1020366819075 Cobos MJ, Fernandez MJ, Rubio J, Kharrat M, et al. (2005). A linkage map of chickpea (Cicer arietinum L.) based on populations from Kabuli x Desi crosses: location of genes for resistance to fusarium wilt race 0. Theor. Appl. Genet. 110: 1347-1353. http://dx.doi.org/10.1007/s00122-005-1980-1 PMid:15806343 Croser JS, Ahmad F, Clarke HJ and Siddique KHM (2003). Utilization of wild Cicer in chickpea improvement-progress, constraints, and prospects. Aust. J. Agr. Res. 54: 429-444. http://dx.doi.org/10.1071/AR02157 Evanno G, Regnaut S and Goudet J (2005). Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol. Ecol. 14: 2611-2620. http://dx.doi.org/10.1111/j.1365-294X.2005.02553.x PMid:15969739 FAO (2009). Agriculture Data. Available at [http://faostat.fao.org/site/567/default.aspx2009]. Accessed June 12, 2011. Gowda CLL (1981). Natural outcrossing in chickpea. Int. Chickpea Newslett. 5: 6. Gupta PK and Varshney RK (2000). The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat. Euphytica 113: 163-185. http://dx.doi.org/10.1023/A:1003910819967 Hüttel B, Winter P, Weising K, Choumane W, et al. (1999). Sequence-tagged microsatellite site markers for chickpea (Cicer arietinum L.). Genome 42: 210-217. PMid:10231957 Iruela M, Rubio J, Cubero JI, Gil J, et al. (2002). Phylogenetic analysis in the genus Cicer and cultivated chickpea using RAPD and ISSR markers. Theor. Appl. Genet. 104: 643-651. http://dx.doi.org/10.1007/s001220100751 PMid:12582669 Lichtenzveig J, Scheuring C, Dodge J, Abbo S, et al. (2005). Construction of BAC and BIBAC libraries and their applications for generation of SSR markers for genome analysis of chickpea, Cicer arietinum L. Theor. Appl. Genet. 110: 492-510. http://dx.doi.org/10.1007/s00122-004-1857-8 PMid:15712010 Liu K and Muse SV (2005). PowerMarker: an integrated analysis environment for genetic marker analysis. Bioinformatics 21: 2128-2129. http://dx.doi.org/10.1093/bioinformatics/bti282 PMid:15705655 Nayak SN, Zhu H, Varghese N, Datta S, et al. (2010). Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome. Theor. Appl. Genet. 120: 1415-1441. http://dx.doi.org/10.1007/s00122-010-1265-1 PMid:20098978    PMCid:2854349 Nguyen TT, Taylor PWJ, Redden RJ and Ford R (2004). Genetic diversity estimates in Cicer using AFLP analysis. Plant Breed. 123: 173-179. http://dx.doi.org/10.1046/j.1439-0523.2003.00942.x Nybom H (2004). Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Mol. Ecol. 13: 1143-1155. http://dx.doi.org/10.1111/j.1365-294X.2004.02141.x PMid:15078452 Page RD (1996). TreeView: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12: 357-358. PMid:8902363 Pritchard JK, Stephens M and Donnelly P (2000). Inference of population structure using multilocus genotype data. Genetics 155: 945-959. PMid:10835412    PMCid:1461096 Rao LS, Rani PU, Deshmukh PS, Kumar PA, et al. (2006). RAPD and ISSR fingerprinting in cultivated chickpea (Cicer arietinum L.) and its wild progenitor Cicer reticulatum Ladizinsky. Genet. Res. Crop Evol. 54: 1235-1244. http://dx.doi.org/10.1007/s10722-006-9104-6 Reif JC, Melchinger AE and Frisch M (2005). Genetical and mathematical properties of similarity and dissimilarity coefficients applied in plant breeding and seed bank management. Crop Sci. 45: 1-7. http://dx.doi.org/10.2135/cropsci2005.0001 Rogers JS (1972). Studies in Genetics. VII. In: Measures of Genetic Similarity and Genetic Distance (Wheeler MR, ed.). University of Texas, Texas, Publication 7213, 145-153. Rohlf FJ (2000). NYSYS-pc: Numerical Taxonomy and Multivariate Analysis System. Version 2.1. Exeter Publications, New York. Saghai-Maroof MA, Soliman KM, Jorgensen RA and Allard RW (1984). Ribosomal DNA spacer-length in barley: Mendelian inheritance, chromosomal location and population dynamics. Proc. Nat. Acad. Sci. U. S. A. 81: 8014- 8018. http://dx.doi.org/10.1073/pnas.81.24.8014 SAS Institute (1998). SAS User’s Guide, Version 6. 4th edn. SAS Institute, Cary. Sefera T, Abebie B, Gaur PM, Assefa K, et al. (2011). Characterisation and genetic diversity analysis of selected chickpea cultivars of nine countries using simple sequence repeat (SSR) markers. Crop Pasture Sci. 62: 177-187. http://dx.doi.org/10.1071/CP10165 Sethy NK, Choudhary S, Shokeen B and Bhatia S (2006a). Identification of microsatellite markers from Cicer reticulatum: molecular variation and phylogenetic analysis. Theor. Appl. Genet. 112: 347-357. http://dx.doi.org/10.1007/s00122-005-0135-8 PMid:16328234 Sethy NK, Shokeen B, Edwards KJ and Bhatia S (2006b). Development of microsatellite markers and analysis of intraspecific genetic variability in chickpea (Cicer arietinum L.). Theor. Appl. Genet. 112: 1416-1428. http://dx.doi.org/10.1007/s00122-006-0243-0 PMid:16534564 Singh R, Prasad CD, Singhal V and Randhawa GJ (2003). Assessment of genetic diversity in chickpea cultivars using RAPD, AFLP and STMS markers. J. Genet. Breed. 57: 165-174. Singh R, Sharma P, Varshney RK and Sharma SK (2008a). Chickpea improvement: role of wild species and genetic markers. Biotechnol. Genet. Eng. 25: 267-313. http://dx.doi.org/10.5661/bger-25-267 PMid:21412359 Singh R, Singhal V and Randhawa GJ (2008b). Molecular analysis of chickpea (Cicer arietinum L.) cultivars using AFLP and STMS markers. J. Plant Biochem. Biotechnol. 17: 167-171. Sudupak A, Akkaya S and Kence A (2002). Analysis of genetic relationships among perennial and annual Cicer species growing in Turkey using RAPD markers. Theor. Appl. Genet. 105: 1220-1228. http://dx.doi.org/10.1007/s00122-002-1060-8 PMid:12582902 Sudupak MA, Akkaya MS and Kence A (2004). Genetic relationships among perennial and annual Cicer species growing in Turkey assessed by AFLP fingerprinting. Theor. Appl. Genet. 108: 937-944. http://dx.doi.org/10.1007/s00122-003-1505-8 PMid:14605811 Tekeoglu M, Rajesh N and Muehlbauer J (2002). Integration of sequence tagged microsatellite sites to the chickpea genetic map. Theor. Appl. Genet. 105: 847-854. http://dx.doi.org/10.1007/s00122-002-0993-2 PMid:12582909 Udupa SM, Sharma A, Sharma RP and Pai RA (1993). Narrow genetic variability in Cicer arietinum L. as revealed by RFLP analysis. J. Plant Biochem. Biotechol. 2: 83-86. Udupa SM, Robertson LD, Weigand F, Baum M, et al. (1999). Allelic variation at (TAA)n microsatellite loci in a world collection of chickpea (Cicer arietinum L.) germplasm. Mol. Gen. Genet. 261: 354-363. http://dx.doi.org/10.1007/s004380050976 Upadhyaya HD, Dwivedi SL, Baum M, Varshney RK, et al. (2008). Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.). BMC Plant Biol. 8: 106. http://dx.doi.org/10.1186/1471-2229-8-106 PMid:18922189    PMCid:2583987 Varshney RK, Horres R, Molina C and Nayak S (2007). Extending the Repertoire of Microsatellite Markers for Genetic Linkage Mapping and Germplasm Screening in Chickpea. Available at [http://www.icrisat.org/journal/volume5/Chickpea_PigeonPea/cp5.pdf]. Accessed June 12, 2011.