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2012
R. A. Campos, da Silva, M. L., da Costa, G. V., Bisch, P. M., Peralta, J. M., Silva, R., Rondinelli, E., and Ürményi, T. P., Gene expression and molecular modeling of the HSP104 chaperone of Trypanosoma cruzi, vol. 11, pp. 2122-2129, 2012.
Atwood JA III, Weatherly DB, Minning TA, Bundy B, et al. (2005). The Trypanosoma cruzi proteome. Science 309: 473-476. http://dx.doi.org/10.1126/science.1110289 PMid:16020736   Cano MI, Gruber A, Vazquez M, Cortes A, et al. (1995). Molecular karyotype of clone CL Brener chosen for the Trypanosoma cruzi genome project. Mol. Biochem. Parasitol. 71: 273-278. http://dx.doi.org/10.1016/0166-6851(95)00066-A   Coura JR and Borges-Pereira J (2010). Chagas disease: 100 years after its discovery. A systemic review. Acta Trop. 115: 5-13. http://dx.doi.org/10.1016/j.actatropica.2010.03.008 PMid:20382097   de Carvalho EF, de Castro FT, Rondinelli E, Soares CM, et al. (1990). HSP 70 gene expression in Trypanosoma cruzi is regulated at different levels. J. Cell Physiol. 143: 439-444. http://dx.doi.org/10.1002/jcp.1041430306 PMid:2193034   Doyle SM and Wickner S (2009). Hsp104 and ClpB: protein disaggregating machines. Trends Biochem. Sci. 34: 40-48. http://dx.doi.org/10.1016/j.tibs.2008.09.010 PMid:19008106   Dragon EA, Sias SR, Kato EA and Gabe JD (1987). The genome of Trypanosoma cruzi contains a constitutively expressed, tandemly arranged multicopy gene homologous to a major heat shock protein. Mol. Cell Biol. 7: 1271-1275. PMid:3550435 PMCid:365202   Drummond AJ, Ashton B, Buxton S, Cheung M, et al (2011). Geneious v5.4. Geneious. Available at [http://www.geneious.com]. Accessed July 24, 2011.   Engman DM, Kirchhoff LV and Donelson JE (1989). Molecular cloning of mtp70, a mitochondrial member of the hsp70 family. Mol. Cell Biol. 9: 5163-5168. PMid:2689873 PMCid:363668   Eswar N, Webb B, Marti-Renom MA, Madhusudhan MS, et al. (2007). Comparative protein structure modeling using MODELLER. Curr. Protoc. Protein Sci. Chapter 2: Unit.   Eswar N, Eramian D, Webb B, Shen MY, et al. (2008). Protein structure modeling with MODELLER. Methods Mol. Biol. 426: 145-159. http://dx.doi.org/10.1007/978-1-60327-058-8_8 PMid:18542861   Fernandes M, Silva R, Rossle SC, Bisch PM, et al. (2005). Gene characterization and predicted protein structure of the mitochondrial chaperonin HSP10 of Trypanosoma cruzi. Gene 349: 135-142. http://dx.doi.org/10.1016/j.gene.2004.11.047 PMid:15780998   Folgueira C and Requena JM (2007). A postgenomic view of the heat shock proteins in kinetoplastids. FEMS Microbiol. Rev. 31: 359-377. http://dx.doi.org/10.1111/j.1574-6976.2007.00069.x PMid:17459115   Giambiagi-de Marval M, Gottesdiener K, Rondinelli E and Van der Ploeg LH (1993). Predicted amino acid sequence and genomic organization of Trypanosoma cruzi hsp 60 genes. Mol. Biochem. Parasitol. 58: 25-31. http://dx.doi.org/10.1016/0166-6851(93)90087-E   Gottesman S, Squires C, Pichersky E, Carrington M, et al. (1990). Conservation of the regulatory subunit for the Clp ATP-dependent protease in prokaryotes and eukaryotes. Proc. Natl. Acad. Sci. U. S. A. 87: 3513-3517. http://dx.doi.org/10.1073/pnas.87.9.3513 PMid:2185473 PMCid:53931   Guex N and Peitsch MC (1997). SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 18: 2714-2723. http://dx.doi.org/10.1002/elps.1150181505 PMid:9504803   Hartl FU and Hayer-Hartl M (2002). Molecular chaperones in the cytosol: from nascent chain to folded protein. Science 295: 1852-1858. http://dx.doi.org/10.1126/science.1068408 PMid:11884745   Hübel A, Brandau S, Dresel A and Clos J (1995). A member of the ClpB family of stress proteins is expressed during heat shock in Leishmania spp. Mol. Biochem. Parasitol. 70: 107-118. http://dx.doi.org/10.1016/0166-6851(95)00012-P   Humphrey W, Dalke A and Schulten K (1996). VMD: visual molecular dynamics. J. Mol. Graph. 14: 33-38. http://dx.doi.org/10.1016/0263-7855(96)00018-5   Kim KS, Teixeira SM, Kirchhoff LV and Donelson JE (1994). Transcription and editing of cytochrome oxidase II RNAs in Trypanosoma cruzi. J. Biol. Chem. 269: 1206-1211. PMid:8288582   Krobitsch S, Brandau S, Hoyer C, Schmetz C, et al. (1998). Leishmania donovani heat shock protein 100. Characterization and function in amastigote stage differentiation. J. Biol. Chem. 273: 6488-6494. http://dx.doi.org/10.1074/jbc.273.11.6488 PMid:9497383   Laskowski RA, Moss DS and Thornton JM (1993). Main-chain bond lengths and bond angles in protein structures. J. Mol. Biol. 231: 1049-1067. http://dx.doi.org/10.1006/jmbi.1993.1351 PMid:8515464   Lee S, Sowa ME, Watanabe YH, Sigler PB, et al. (2003). The structure of ClpB: a molecular chaperone that rescues proteins from an aggregated state. Cell 115: 229-240. http://dx.doi.org/10.1016/S0092-8674(03)00807-9   Martí-Renom MA, Stuart AC, Fiser A, Sanchez R, et al. (2000). Comparative protein structure modeling of genes and genomes. Annu. Rev. Biophys. Biomol. Struct. 29: 291-325. http://dx.doi.org/10.1146/annurev.biophys.29.1.291 PMid:10940251   Pérez-Morales D, Ostoa-Saloma P and Espinoza B (2009). Trypanosoma cruzi SHSP16: Characterization of an alpha-crystallin small heat shock protein. Exp. Parasitol. 123: 182-189. http://dx.doi.org/10.1016/j.exppara.2009.06.019 PMid:19595996   Rodrigues DC, Silva R, Rondinelli E and Urmenyi TP (2010). Trypanosoma cruzi: modulation of HSP70 mRNA stability by untranslated regions during heat shock. Exp. Parasitol. 126: 245-253. http://dx.doi.org/10.1016/j.exppara.2010.05.009 PMid:20493845   Rondinelli E (1994). Conservation of heat-shock proteins in Trypanosoma cruzi. Parasitol. Today 10: 172-176. http://dx.doi.org/10.1016/0169-4758(94)90020-5   Sali A and Blundell TL (1993). Comparative protein modelling by satisfaction of spatial restraints. J. Mol. Biol. 234: 779-815. http://dx.doi.org/10.1006/jmbi.1993.1626 PMid:8254673   Schrödinger LCC (2011). The PyMol Molecular Graphics System. Version 1.3. pymol.org. Available at [http://www.pymol.org/]. Accessed August 22, 2011.   Vonlaufen N, Kanzok SM, Wek RC and Sullivan WJ Jr (2008). Stress response pathways in protozoan parasites. Cell Microbiol. 10: 2387-2399. http://dx.doi.org/10.1111/j.1462-5822.2008.01210.x PMid:18647172