Publications

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2012
I. Polat, Kaçar, Y. A., Yesiloglu, T., Uzun, A., Tuzcu, O., Gulsen, O., Incesu, M., Kafa, G., Turgutoglu, E., and Anil, S., Molecular characterization of sour orange (Citrus aurantium) accessions and their relatives using SSR and SRAP markers, vol. 11, pp. 3267-3276, 2012.
Aka-Kacar Y, Demirel A, Tuzcu O, Yesiloglu T, et al. (2005). Preliminary results on fingerprinting lemon genotypes tolerant to mal secco (Phoma tracheiphila Kanc. et Ghik) disease by RAPD markers. Biologia 60: 295-300.   Barkley NA, Roose ML, Krueger RR and Federici CT (2006). Assessing genetic diversity and population structure in a citrus germplasm collection utilizing simple sequence repeat markers (SSRs). Theor. Appl. Genet. 112: 1519-1531. http://dx.doi.org/10.1007/s00122-006-0255-9 PMid:16699791   Barkley NA, Krueger RR, Federici CT and Roose ML (2009). What phylogeny and gene genealogy analyses reveal about homoplasy in citrus microsatellite alleles. Plant Syst. Evol. 282: 71-86. http://dx.doi.org/10.1007/s00606-009-0208-2   Breto MP, Ruiz C, Pina JA and Asins MJ (2001). The diversification of Citrus clementina Hort. ex Tan., a vegetatively propagated crop species. Mol. Phylogenet. Evol. 21: 285-293. http://dx.doi.org/10.1006/mpev.2001.1008 PMid:11697922   Campos ET, Espinosa MAG, Warburton ML, Varela AS, et al. (2005). Characterization of mandarin (Citrus spp.) using morphological and AFLP markers. Interciencia 30: 687-693.   Capparelli R, Viscardi M, Amoroso MG, Blaiotta G, et al. (2004). Inter-simple sequence repeat markers and flow cytometry for the characterization of closely related Citrus limon germplasms. Biotechnol. Lett. 26: 1295-1299. http://dx.doi.org/10.1023/B:BILE.0000044920.36497.fc PMid:15483390   Castle WS (1987). Citrus Rootstocks. In: Rootstocks for Fruit Crops (Rom RC and Carlson RF, eds.). Wiley, New York, 361-399.   Comlekcioglu N, Simsek O, Boncuk M and Aka-Kacar Y (2010). Genetic characterization of heat tolerant tomato (Solanum lycopersicon) genotypes by SRAP and RAPD markers. Genet. Mol. Res. 9: 2263-2274. http://dx.doi.org/10.4238/vol9-4gmr876 PMid:21128206   Cottin R (2002). Citrus of the World a Citrus Directory Version 2. 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Phylogenetic relationships within the genus Citrus (Rutaceae) and related genera as revealed by RFLP and RAPD analysis. Theor. Appl. Genet. 96: 812-822. http://dx.doi.org/10.1007/s001220050807   Fu CH, Chen CL, Guo WW and Deng XX (2004). GISH, AFLP and PCR-RFLP analysis of an intergeneric somatic hybrid combining Goutou sour orange and Poncirus trifoliata. Plant Cell Rep. 23: 391-396. http://dx.doi.org/10.1007/s00299-004-0828-5 PMid:15252694   Gulsen O and Roose ML (2001). Limonlarda genetik çesitlilik, bazi turunçgillerde akrabalik derecelerinin DNA markirlarinin kullanilarak belirlenmesi. Bahçe 30: 53-63.   Herrero R, Asíns MJ, Carbonell EA and Navarro L (1996). Genetic diversity in the orange subfamily Aurantioideae. I. Intraspecies and intragenus genetic variability. Theor. Appl. Genet. 92: 599-609. http://dx.doi.org/10.1007/BF00224564   Hirai M, Kozaki I and Kajiura I (1986). Isozyme analysis and phylogenic relationship of Citrus. Jpn. J. Breed. 36: 377-389.   Hodgson RW (1967). Horticultural Varieties of Citrus. In: The Citrus Industry (Reuther W, Webber HJ and Batchelor LD, eds.). Vol 1. University of California Press, Berkeley, 431-591.   Hvarleva T, Kapari-Isaia T, Papayiannis L, Atanassov A, et al. (2008). Characterization of Citrus cultivars and clones in Cyprus through microsatellite and RAPD analysis. Biotechnol. Biotec. Eq. 22: 787-794.   Jackuemond C (2010). Available at [http://users.kymp.net/citruspages/souroranges.html#tosu]. Accessed January 11, 2011.   Li G and Quiros CF (2001). Sequence-related amplified polymorphism (SRAP), a new marker system based on a simple PCR reaction: its application to mapping and gene tagging in Brassica. Theor. Appl. Genet. 103: 455-461. http://dx.doi.org/10.1007/s001220100570   Li X, Xie R, Lu Z and Zhou Z (2010). The origin of cultivated citrus as inferred from internal transcribed spacer and chloroplast DNA sequence and amplified fragment length polymorphism fingerprints. J. Am. Soc. Hort. Sci. 135: 341-350.   Luro F, Rist D and Ollitrault P (2000). Sequence Tagged Microsatellites Polymorphism: an Alternative Tool for Cultivar Identification and Evaluation of Genetic Relationships in Citrus. Proceedings of the 9th International Society of Citriculture Congress, Florida, 170-171.   Mantel N (1967). The detection of disease clustering and a generalized regression approach. Cancer Res. 27: 209-220. PMid:6018555   Nicolosi E, Deng ZN, Gentile A, La Malfa S, et al. (2000). Citrus phylogeny and genetic origin of important species as investigated by molecular markers. Theor. Appl. Genet. 100: 1155-1166. http://dx.doi.org/10.1007/s001220051419   Novelli VM, Cristofani M, Souza AA and Machado MA (2006). Development and characterization of polymorphic microsatellite markers for the sweet orange (Citrus sinensis L. Osbeck). Genet. Mol. Biol. 29: 90-96. http://dx.doi.org/10.1590/S1415-47572006000100018   Okyay S (1987). Pomological Characteristics of Source Orange Clones Selected from east Mediterranean Region of Turkey. Master's thesis, University of Cukurova, Adana.   Rahman MM, Nito N and Isshiki S (2001). Cultivar identification of 'Yuzu' (Citrus junos Sieb. ex Tanaka) and related acid citrus by leaf isozymes. Sci. Hortic. 87: 191-198. http://dx.doi.org/10.1016/S0304-4238(00)00175-8   Rodriguez M, Monter A, Espinosa A, Castaneda CG, et al. (2005). Polyembryony and RAPD markers for identification of zygotic and nucellar seedlings in Citrus. Agrociencia 39: 371-383.   Rohlf FJ (2000). NTSYS-pc, Numerical Taxonomy and Multivarite Analysis System. Version 2.11. Exeter, New York.   Roose ML, Soost RK and Cameron JW (1995). Citrus. In: Evolution of Crop Species (Smart J and Simmonds NW, eds.). 2nd edn. Longman Scientific and Technical, Harlow, 443.   Roose ML (2009). Use of Molecular Markers to Understand Phylogeny and Genetic Diversity of Citrus. PCR Primers for Citrus Germplasm Characterization. Available at [http://www.plantbiology.ucr.edu/faculty/roose.html]. Accessed January 9, 2011.   Siragusa M, De Pasquale F, Abbate L and Tusa N (2006). Identification of sour orange accessions and evaluation of their genetic variability by molecular marker analyses. Hortscience 41: 84-89.   Smith JSC, Chin ECL, Shu H, Smith OS, et al. (1997). An evaluation of the utility of SSR loci as molecular markers in maize (Zea mays L.): comparisons with data from RFLPS and pedigree. Theor. Appl. Genet. 95: 163-173. http://dx.doi.org/10.1007/s001220050544   Swingle WT (1967). The Botany of Citrus and its Wild Relatives of the Orange Subfamily (Family Rutaceae, Subfamily Aurantioideae). In: The Citrus Industry (Webber HJ and Batchelor LD, eds.). Vol. 1. University of California, Riverside, 129-474.   Tanaka T (1954). Species Problem in Citrus. Japanese Society for the Promotion of Science, Tokyo.   Torres AM, Soost RK and Diedenhofen U (1978). Leaf isosymes as genetic markers in Citrus. Am. J. Bot. 65: 869-881. http://dx.doi.org/10.2307/2442183   Tuzcu O, Yesiloglu T and Yildirim B (2001). Citrus 2001 Reports. Florida Grower Annual Edition Mid., Turkey.   Uzun A, Yesiloglu T, Aka-Kacar Y, Tuzcu O, et al. (2009). Genetic diversity and relationships within Citrus and related genera based on sequence related amplified polymorphism markers (SRAPs). Sci. Hortic. 121: 306-312. http://dx.doi.org/10.1016/j.scienta.2009.02.018