Publications

Altschul SF, Gish W, Miller W, Myers EW, et al. (1990). Basic local alignment search tool. J. Mol. Biol. 215: 403-410. PMid:2231712   Araújo WL, Marcon J, Maccheroni W Jr, Van Elsas JD, et al. (2002). Diversity of endophytic bacterial populations and their interaction with Xylella fastidiosa in citrus plants. Appl. Environ. Microbiol. 68: 4906-4914. http://dx.doi.org/10.1128/AEM.68.10.4906-4914.2002 PMid:12324338 PMCid:126398   Azevedo JL and Araújo WL (2007). Diversity and Applications of Endophytic Fungi Isolated from Tropical Plants. In: Fungi: Multifaceted Microbes (Guangui BN and Deshmukh SK, eds.). Anamaya Publishers New Delhi and CRC Press, Boca Raton, 189-207.   Azevedo JL, Maccheroni W Jr, Pereira JO and Araújo WL (2000). Endophytic microorganisms: a review on insect control and recent advances on tropical plants. Electronic. J. Biotechnol. 3: 40-65. http://dx.doi.org/10.2225/vol3-issue1-fulltext-4   Berg G and Hallmann J (2006). Control of Plant Pathogenic Fungi with Bacterial Endophytes. In: Microbial Root Endophytes (Schulz B, Boyle C and Sieber TN, eds.). Springer-Verlag, Berlin, 53-66. http://dx.doi.org/10.1007/3-540-33526-9_4 PMid:16482371   Brunetta JMFC, Alfenas AC, Mafia RG and Gomes JM (2007). Avaliação da especificidade de rizobactérias isoladas de diferentes espécies de Pinus sp. Rev. Árvore 31: 1027-1033. http://dx.doi.org/10.1590/S0100-67622007000600007   Chanway CP (1998). Bacterial endophytes: ecological and practical implications. Sydowia 50: 149-170.   Chun J and Bae KS (2000). Phylogenetic analysis of Bacillus subtilis and related taxa based on partial gyrA gene sequences. Antonie van Leeuwenhoek 78: 123-127. http://dx.doi.org/10.1023/A:1026555830014 PMid:11204764   Dias ACF, Costa FEC, Andreote FD, Lacava PT, et al. (2009). Isolation of micropropagated strawberry endophytic bacteria and assessment of their potential for plant growth promotion. World J. Microbiol. Biotechnol. 25: 189-195. http://dx.doi.org/10.1007/s11274-008-9878-0   Díaz K, Valiente C, Martínez M, Castillo M, et al. (2009). Root-promoting rhizobacteria in Eucalyptus globules cuttings. World J. Microbiol. Biotechnol. 25: 867-873. http://dx.doi.org/10.1007/s11274-009-9961-1   Dickson A, Leaf AL and Hosner JF (1960). Quality appraisal of white spruceand white pine seedling stock in nurseries. Forest. Chron. 36: 10-13.   Döbereiner J, Baldani VLD and Baldani JI (1995). Como Isolar e Identificar Bactérias Diazotróficas de Plantas Não- Leguminosas. EMBRAPA-CNPAB, Rio de Janeiro. PMCid:1236322   Dyszynski G and Sheldon W (2011). RDPquery: A Java Program from the Sapelo Program Microbial Observatory for Automatic Classification of Bacterial 16S rRNA Sequences Based on Ribosomal Database Project Taxonomy and Smith-Waterman Alignment. Avaliable at [http://simo.marsci.uga.edu/public_db/rdp_query.htm]. Accessed September 15, 2011.   Ferreira A (2008). Interação Entre Bactérias Endofíticas e do Rizoplano com Eucalyptus. Master's thesis, Escola Superior de Agricultura "Luiz de Queiroz", USP, Piracicaba.   Ferreira A, Quecine MC, Lacava PT, Oda S, et al. (2008). Diversity of endophytic bacteria from Eucalyptus species seeds and colonization of seedlings by Pantoea agglomerans. FEMS Microbiol. Lett. 287: 8-14. http://dx.doi.org/10.1111/j.1574-6968.2008.01258.x PMid:18710397   Kimura M (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120. http://dx.doi.org/10.1007/BF01731581 PMid:7463489   Kuklinsky-Sobral J, Araujo WL, Mendes R, Geraldi IO, et al. (2004). Isolation and characterization of soybean-associated bacteria and their potential for plant growth promotion. Environ. Microbiol. 6: 1244-1251. http://dx.doi.org/10.1111/j.1462-2920.2004.00658.x PMid:15560822   Lis JT (1980). Fractionation of DNA fragments by polyethylene glycol induced precipitation. Methods Enzymol. 65: 347-353. http://dx.doi.org/10.1016/S0076-6879(80)65044-7   Lombard L, Zhou XD, Crous PW, Wingfield BD, et al. (2010). Calonectria species associated with cutting rot of Eucalyptus. Persoonia 24: 1-11. http://dx.doi.org/10.3767/003158510X486568 PMid:20664755 PMCid:2890164   Long HH, Schmidt DD and Baldwin IT (2008). Native bacterial endophytes promote host growth in a species-specific manner; phytohormone manipulations do not result in common growth responses. PLoS One 3: e2702. http://dx.doi.org/10.1371/journal.pone.0002702 PMid:18628963 PMCid:2444036   Mafia RG, Alfenas AC, Ferreira EM, Zarpelon TG, et al. (2005). Crescimento de mudas e produtividade de minijardins clonais de eucalipto tratados com rizobactérias selecionadas. Rev. Árvore 29: 843-851. http://dx.doi.org/10.1590/S0100-67622005000600002   Nautiyal CS (1999). An efficient microbiological growth medium for screening phosphate solubilizing microorganism. FEMS Microbiol. Lett. 170: 265-270. http://dx.doi.org/10.1111/j.1574-6968.1999.tb13383.x PMid:9919677   Nunes FV (2004). Isolamento e Identificação de Bactérias Endofíticas de Café (Coffea arabica e Coffea robusta) e suas Aplicações Biotecnológicas. Master's thesis, Universidade de São Paulo, São Paulo.   Patten CL and Glick BR (2002). Role of Pseudomonas putida indoleacetic acid in development of the host plant root system. Appl. Environ. Microbiol. 68: 3795-3801. http://dx.doi.org/10.1128/AEM.68.8.3795-3801.2002 PMid:12147474 PMCid:124051   Procópio REL (2004). Diversidade de Bactérias Endofíticas de Eucalyptus spp. e Avaliação do seu Potencial Biotecnológico. Doctoral thesis, Escola Superior de Agricultura "Luiz de Queiroz", USP, Piracicaba.   Procópio REL, Araujo WL, Maccheroni W Jr and Azevedo JL (2009). Characterization of an endophytic bacterial community associated with Eucalyptus spp. Genet. Mol. Res. 8: 1408-1422. http://dx.doi.org/10.4238/vol8-4gmr691 PMid:19937585   Rodriguez RJ, White JF Jr, Arnold AE and Redman RS (2009). Fungal endophytes: diversity and functional roles. New Phytol. 182: 314-330. http://dx.doi.org/10.1111/j.1469-8137.2009.02773.x PMid:19236579   Saitou N and Nei M (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425. PMid:3447015   Sambrook J, Fritschi EF and Maniatis T (1989). Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, New York.   Shi Y, Lou K and Li C (2009). Promotion of plant growth by phytohormones-producing endophytic microbes of sugar beet. Biol. Fertil. Soils 45: 645-653. http://dx.doi.org/10.1007/s00374-009-0376-9   Strobel GA (2002). Rainforest endophytes and bioactive products. Crit. Rev. Biotechnol. 22: 315-333. http://dx.doi.org/10.1080/07388550290789531 PMid:12487423   Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599. http://dx.doi.org/10.1093/molbev/msm092 PMid:17488738   Unterseher M, Reiher A, Finstermeier K and Otto P (2007). Species richness and distribution patterns of leaf-inhabiting endophytic fungi in a temperate forest canopy. Mycol. Prog. 6: 201-212. http://dx.doi.org/10.1007/s11557-007-0541-1   Verma VC, Gond SK, Kumar A, Kharwar RN, et al. (2007). The endophytic mycoflora of bark, leaf, and stem tissues of Azadirachta indica A. Juss (neem) from Varanasi (India). Microb. Ecol. 54: 119-125. http://dx.doi.org/10.1007/s00248-006-9179-9 PMid:17394041   Wang H, Wen K, Zhao X, Wang X, et al. (2009). The inhibitory activity of endophytic Bacillus sp. strain CHM1 against plant pathogenic fungi and its plant growth-promoting effect. Crop Protect. 28: 634-639. http://dx.doi.org/10.1016/j.cropro.2009.03.017