Publications

Avise JC (1994). Molecular Markers, Natural History and Evolution. Sinauer Associates, New York. http://dx.doi.org/10.1007/978-1-4615-2381-9   Bremer JRA, Mejuto J, Greig TW and Ely B (1996). Global population structure of the swordfish (Xiphias gladius L.) as revealed by analysis of the mitochondrial DNA control region. J. Exp. Mar. Biol. Ecol. 197: 295-310. http://dx.doi.org/10.1016/0022-0981(95)00164-6   Broughton RE and Dowling TE (1994). Length variation in mitochondrial DNA of the minnow Cyprinella spiloptera. Genetics 138: 179-190. PMid:8001785 PMCid:1206129   Broughton RE and Dowling TE (1997). Evolutionary dynamics of tandem repeats in the mitochondrial DNA control region of the minnow Cyprinella spiloptera. Mol. Biol. Evol. 14: 1187-1196. http://dx.doi.org/10.1093/oxfordjournals.molbev.a025728 PMid:9402730   Brown GG, Gadaleta G, Pepe G, Saccone C, et al. (1986). Structural conservation and variation in the D-loop-containing region of vertebrate mitochondrial DNA. J. Mol. Biol. 192: 503-511. http://dx.doi.org/10.1016/0022-2836(86)90272-X   Cheng Y, Xu T, Shi G and Wang R (2010). Complete mitochondrial genome of the miiuy croaker Miichthys miiuy (Perciformes, Sciaenidae) with phylogenetic consideration. Mar. Genomics 3: 201-209. http://dx.doi.org/10.1016/j.margen.2010.10.003 PMid:21798214   Clayton DA (1991). Nuclear gadgets in mitochondrial DNA replication and transcription. Trends Biochem. Sci. 16: 107- 111. http://dx.doi.org/10.1016/0968-0004(91)90043-U   Guo B, Zhang B, Dai FQ and Jin XS (2010). Diet composition and ontogenetic variation in feeding habits of juvenile Setipinna taty in the Haizhou bay. J. Fish. China 34: 741-747. http://dx.doi.org/10.3724/SP.J.1231.2010.06798   Guo X, Liu S and Liu Y (2003). Comparative analysis of the mitochondrial DNA control region in cyprinids with different ploidy level. Aquaculture 224: 25-38. http://dx.doi.org/10.1016/S0044-8486(03)00168-6   Guo XH, Liu SJ, Liu Q and Liu Y (2004). New progresses on mitochondrial DNA in fish. Yi Chuan Xue Bao 31: 983-1000. PMid:15493150   Huang ZJ, Xu XP, Tang JJ, Zhang JQ, et al. (2009). Application and primer design of mitochondrial DNA D-loop of freshwater fishes. Acta Sci. Nat. Univ. Sunyatseni. DOI [CNKI:SUN:ZSDZ.0.2009-04-017].   Iguchi K, Tanimura Y, Takeshima H and Nishida M (1999). Genetic variation and geographic population structure of amphidromous ayu Plecoglossus altivelis as examined by mitochondrial DNA sequencing. Fish. Sci. 65: 63-67.   Ishikawa S, Aoyama J, Tsukamoto K and Nishida M (2001). Population structure of the Japanese Eel, Anguilla japonica as examined by mitochondrial DNA sequencing. Fish. Sci. 67: 246-253. http://dx.doi.org/10.1046/j.1444-2906.2001.00227.x   Lee WJ, Conroy J, Howell WH and Kocher TD (1995). Structure and evolution of teleost mitochondrial control regions. J. Mol. Evol. 41: 54-66. http://dx.doi.org/10.1007/BF00174041 PMid:7608989   Liu HY, Jing SG, Su TF and Gong SY (2004). Polymorphism study of the mitochondrial DNA D-loop gene sequences from Sparus latus. J. Fish. China 28: 371-374.   Liu HZ (2002). The structure and evolution of the mtDNA control region in fish: taking example for Acheilognathinae. Prog. Nat. Sci. 12: 266-270.   Liu Y, Cheng J and Li S (2004). A study on the distribution of Sefipinna taty in the East China Sea. Mar. Fish. 26: 255-260.   Liu Y, Cheng JH and Chen XG (2006). Studies on the seasonal distribution of Setipinna taty in the East China Sea. Mar. Fish. Res. 27: 1-6.   Liu Y and Cui Z (2009). The complete mitochondrial genome sequence of the cutlassfish Trichiurus japonicus (Perciformes: Trichiuridae): Genome characterization and phylogenetic considerations. Mar. Genomics 2: 133-142. http://dx.doi.org/10.1016/j.margen.2009.07.003 PMid:21798182   Peng SM, Shi ZH and Hou J (2010). Comparative analysis on the genetic diversity of cultured and wild silver pomfret populations based on mtD-loop and COI gene. J. Fish. China 34: 19-24. http://dx.doi.org/10.3724/SP.J.1231.2010.06384   Rand E (2000). Mitochondrial DNA. Blackwell, Oxford.   Saccone C, Attimonelli M and Sbisa E (1987). Structural elements highly preserved during the evolution of the D-loop-containing region in vertebrate mitochondrial DNA. J. Mol. Evol. 26: 205-211. http://dx.doi.org/10.1007/BF02099853 PMid:3129568   Sbisa E, Tanzariello F, Reyes A, Pesole G, et al. (1997). Mammalian mitochondrial D-loop region structural analysis: identification of new conserved sequences and their functional and evolutionary implications. Gene 205: 125-140. http://dx.doi.org/10.1016/S0378-1119(97)00404-6   Shadel GS and Clayton DA (1997). Mitochondrial DNA maintenance in vertebrates. Annu. Rev. Biochem. 66: 409-435. http://dx.doi.org/10.1146/annurev.biochem.66.1.409 PMid:9242913   Southern SO, Southern PJ and Dizon AE (1988). Molecular characterization of a cloned dolphin mitochondrial genome. J. Mol. Evol. 28: 32-42. http://dx.doi.org/10.1007/BF02143495 PMid:3148740   Sun SD and Ren YP (2003). Study on the fishery biology of Setipinna taty in the southern yellow sea. Trans. Oceanol. Limnol. 1: 62-65.   Tabata K and Taniguchi N (2000). Differences between Pargus major and Pagrus auratus through mainly mtDNA control region analysis. Fish. Sci. 66: 9-18. http://dx.doi.org/10.1046/j.1444-2906.2000.00032.x   Xiong Y, Tang JH, Liu PT, Zhang XM, et al. (2009). Resource estimate on Setipinna taty in the southern yellow sea. Oceanol. Limnol. 40: 500-505.   Yang B, Chen XY and Yang JX (2008). Structure of the mitochondrial DNA control region and population genetic diversity analysis of Anabarilius grahami (Regan). Zool. Res. 29: 379-385. http://dx.doi.org/10.3724/SP.J.1141.2008.00379   Zeng QL and Liu HZ (2001). Study on mitochondrial DNA control region of the Ictiobus cypriellus. J. Hubei Univ. 23: 261-264.   Zhang C, Chen X, He T, Liu X, et al. (2007). Genetic structure of Malus sieversii population from Xinjiang, China, revealed by SSR markers. J. Genet. Genomics 34: 947-955 http://dx.doi.org/10.1016/S1673-8527(07)60106-4   Zhang MH, Wang Y and Zhang J (2004). Studies on the growth and death character of Setipinna taty in the South of Bohai Sea. J. Zhejiang Ocean Univ. 23: 31-36.   Zhang Y, Zhang E and He SP (2003). Studies on the structure of the control region of the bagridae in China and its phylogenetic significance. Acta Hydrobiol. Sin. 27: 463-467.   Zhu TJ, Yang JQ and Tang WQ (2008). MtDNA control region sequence structure of the genus Coilia in Yangtze river estuary. J. Shanghai Fish. Univ. 17: 152-157. http://dx.doi.org/10.1007/s11741-008-0213-1

Baker PJ, Britton KL, Rice DW, Rob A, et al. (1992). Structural consequences of sequence patterns in the fingerprint region of the nucleotide binding fold. Implications for nucleotide specificity. J. Mol. Biol. 228: 662-671. http://dx.doi.org/10.1016/0022-2836(92)90848-E   Beckmann JD and Frerman FE (1985). Electron-transfer flavoprotein-ubiquinone oxidoreductase from pig liver: purification and molecular, redox, and catalytic properties. Biochemistry 24: 3913-3921. http://dx.doi.org/10.1021/bi00336a016 PMid:4052375   Davis JA (2003). Development of Hatchery Techniques for the Mud Crab Scylla serrata (Forskål) in South Africa. PhD Thesis, Ghet University, Ghent.   Frerman FE (1988). Acyl-CoA dehydrogenases, electron transfer flavoprotein and electron transfer flavoprotein dehydrogenase. Biochem. Soc. Trans. 16: 416-418. PMid:3053288   Izai K, Uchida Y, Orii T, Yamamoto S, et al. (1992). Novel fatty acid beta-oxidation enzymes in rat liver mitochondria. I. Purification and properties of very-long-chain acyl-coenzyme A dehydrogenase. J. Biol. Chem. 267: 1027-1033. PMid:1730632   Liu HP, Chen RY, Zhang M and Wang KJ (2010). Isolation, gene cloning and expression profile of a pathogen recognition protein: a serine proteinase homolog (Sp-SPH) involved in the antibacterial response in the crab Scylla paramamosain. Dev. Comp. Immunol. 34: 741-748. http://dx.doi.org/10.1016/j.dci.2010.02.005 PMid:20153768   Macnae W (1969). A general account of the fauna and flora of mangrove swamps and forests in the Indo-West-Pacific region. Adv. Mar. Biol. 6: 73-103. http://dx.doi.org/10.1016/S0065-2881(08)60438-1   McKie JH and Douglas KT (1991). Evidence for gene duplication forming similar binding folds for NAD(P)H and FAD in pyridine nucleotide-dependent flavoenzymes. FEBS Lett. 279: 5-8. http://dx.doi.org/10.1016/0014-5793(91)80236-V   Overton JL, Macintosh DJ and Thorpe RS (1997). Multivariate analysis of the mud crab Scylla serrata (Brachyura: Portunidae) from four locations in Southeast Asia. Mar. Biol. 128: 55-62. http://dx.doi.org/10.1007/s002270050068   Perrine D (1979). The Mangrove Crab on Ponape. Marine Resources Division, Ponape, Eastern Caroline Islands.   Roberts DL, Frerman FE and Kim JJ (1996). Three-dimensional structure of human electron transfer flavoprotein to 2.1-A resolution. Proc. Natl. Acad. Sci. U. S. A. 93: 14355-14360. http://dx.doi.org/10.1073/pnas.93.25.14355 PMid:8962055 PMCid:26136   Ruzicka FJ and Beinert H (1977). A new iron-sulfur flavoprotein of the respiratory chain. A component of the fatty acid beta oxidation pathway. J. Biol. Chem. 252: 8440-8445. PMid:925004   Shen Y and Lai Q (1994). Present Status of Mangrove Crab (Scylla serrata (Forskål)) Culture in China. The ICLARM Quarterly. Naga 17: 28-29.   Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599. http://dx.doi.org/10.1093/molbev/msm092 PMid:17488738   Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, et al. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882. http://dx.doi.org/10.1093/nar/25.24.4876 PMid:9396791 PMCid:147148   Tsai MH and Saier MH Jr (1995). Phylogenetic characterization of the ubiquitous electron transfer flavoprotein families ETF-alpha and ETF-beta. Res. Microbiol. 146: 397-404. http://dx.doi.org/10.1016/0923-2508(96)80285-3   Wierenga RK and Hol WG (1983). Predicted nucleotide-binding properties of p21 protein and its cancer-associated variant. Nature 302: 842-844. http://dx.doi.org/10.1038/302842a0 PMid:6843652   Zou Z, Zhang Z, Wang Y, Han K, et al. (2011). EST analysis on the gonad development related organs and microarray screen for differentially expressed genes in mature ovary and testis of Scylla paramamosain. Comp. Biochem. Physiol. Part D Genomics Proteomics 6: 150-157. http://dx.doi.org/10.1016/j.cbd.2010.12.003 PMid:21262594