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Found 22 results
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2016
X. Liu, Chen, J. M., Lou, J. L., Huang, Y. X., Yan, Y., Sun, G. Z., Li, N., Liu, X., Chen, J. M., Lou, J. L., Huang, Y. X., Yan, Y., Sun, G. Z., and Li, N., Correlation between hepatitis B virus DNA levels and diagnostic tests for HBsAg, HBeAg, and PreS1-Ag in chronic hepatitis B, vol. 15, p. -, 2016.
X. Liu, Chen, J. M., Lou, J. L., Huang, Y. X., Yan, Y., Sun, G. Z., Li, N., Liu, X., Chen, J. M., Lou, J. L., Huang, Y. X., Yan, Y., Sun, G. Z., and Li, N., Correlation between hepatitis B virus DNA levels and diagnostic tests for HBsAg, HBeAg, and PreS1-Ag in chronic hepatitis B, vol. 15, p. -, 2016.
H. Liu, Long, Z. C., Li, L. N., Wang, Q. F., Chen, J. M., Liao, K., Liu, H., Long, Z. C., Li, L. N., Wang, Q. F., Chen, J. M., Liao, K., Liu, H., Long, Z. C., Li, L. N., Wang, Q. F., Chen, J. M., and Liao, K., Development and characterization of microsatellite loci in Brasenia schreberi (Cabombaceae) based on the next-generation sequencing, vol. 15, p. -, 2016.
H. Liu, Long, Z. C., Li, L. N., Wang, Q. F., Chen, J. M., Liao, K., Liu, H., Long, Z. C., Li, L. N., Wang, Q. F., Chen, J. M., Liao, K., Liu, H., Long, Z. C., Li, L. N., Wang, Q. F., Chen, J. M., and Liao, K., Development and characterization of microsatellite loci in Brasenia schreberi (Cabombaceae) based on the next-generation sequencing, vol. 15, p. -, 2016.
H. Liu, Long, Z. C., Li, L. N., Wang, Q. F., Chen, J. M., Liao, K., Liu, H., Long, Z. C., Li, L. N., Wang, Q. F., Chen, J. M., Liao, K., Liu, H., Long, Z. C., Li, L. N., Wang, Q. F., Chen, J. M., and Liao, K., Development and characterization of microsatellite loci in Brasenia schreberi (Cabombaceae) based on the next-generation sequencing, vol. 15, p. -, 2016.
Z. C. Long, Gichira, A. W., Chen, J. M., Wang, Q. F., Liao, K., and A, Development of EST-SSR markers in the relict tree Davidia involucrata (Davidiaceae) using transcriptome sequencing, vol. 15, no. 4, p. -, 2016.
Conflicts of interestThe authors declare no conflict of interestACKNOWLEDGMENTSWe thank Zhi-Yuan Du, Le-Na Li, and Hua Liu for their help in the laboratory. Research supported by grants from the National Natural Science Foundation of China (#31200170 and #31570220). REFERENCESChen JM, Zhao SY, Liao YY, Gichira AW, et al (2015). Chloroplast DNA phylogeographic analysis reveals significant spatial genetic structure of the relictual tree Davidia involucrata (Davidiaceae). Conserv. Genet. 16: 583-593. http://dx.doi.org/10.1007/s10592-014-0683-z Chen Z, Xue C, Zhu S, Zho F, et al (2005). GoPipe: streamlined gene ontology annotation for batch anonymous sequences with statistics. Prog. Biochem. Biophys. 32: 187-191. Du YJ, Dai QY, Zhang LY, Qiu YX, et al (2012). Development of microsatellite markers for the dove tree, Davidia involucrata (Nyssaceae), a rare endemic from China. Am. J. Bot. 99: e206-e209. http://dx.doi.org/10.3732/ajb.1100507 Fu LK and Jin JM (1992). China plant red data book - rare and endangered plants. Vol. 1. Science Press, Beijing. Grabherr MG, Haas BJ, Yassour M, Levin JZ, et al (2011). Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nat. Biotechnol. 29: 644-652. http://dx.doi.org/10.1038/nbt.1883 Kanehisa M, Goto S, Furumichi M, Tanabe M, et al (2010). KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res. 38: D355-D360. http://dx.doi.org/10.1093/nar/gkp896 Li XP, Li ZL, He CL, Zhu WY, et al (2012a). Genetic diversity of the endangered Davidia involucrata by AFLP analysis. Acta Hort. Sin. 39: 992-998. Li Z, Wang C, Liu Y, Li J, et al (2012b). Microsatellite primers in the Chinese dove tree, Davidia involucrata (Cornaceae), a relic species of the Tertiary. Am. J. Bot. 99: e78-e80. http://dx.doi.org/10.3732/ajb.1100365 Luo S, He Y, Ning G, Zhang J, et al (2011). Genetic diversity and genetic structure of different populations of the endangered species Davidia involucrata in China detected by inter-simple sequence repeat analysis. Trees 25: 1063-1071. http://dx.doi.org/10.1007/s00468-011-0581-7 Ma Q, Du YJ, Chen N, Zhang LY, et al (2015). Phylogeography of Davidia involucrata (Davidiaceae) inferred from cpDNA haplotypes and nSSR data. Syst. Bot. 40: 796-810. http://dx.doi.org/10.1600/036364415X689267 Manchester SR, et al (2002). Leaves and fruits of Davidia (Cornales) from the Paleocene of North America. Syst. Bot. 27: 368-382. Ng P, Wei CL, Sung WK, Chiu KP, et al (2005). Gene identification signature (GIS) analysis for transcriptome characterization and genome annotation. Nat. Methods 2: 105-111. http://dx.doi.org/10.1038/nmeth733 Peakall R, Smouse PE, et al (2012). GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update. Bioinformatics 28: 2537-2539. http://dx.doi.org/10.1093/bioinformatics/bts460 Peng YL, Hu YQ, Sun H, et al (2003). Allozyme analysis of Davidia involucrata var. vilmoriniana and its biogeography significance Acta Bot. Yunnanica 25: 55-62. Rice P, Longden I, Bleasby A, et al (2000). EMBOSS: the European molecular biology open software suite. Trends Genet. 16: 276-277. http://dx.doi.org/10.1016/S0168-9525(00)02024-2 Rozen S, Skaletsky H, et al (2000). Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 132: 365-386. Song CW, Bao MZ, et al (2004). Study on genetic diversity of RAPD mark for natural Davidia involucrata population. Sci. Silvae Sin. 40: 75-79. Tang CQ, Ohsawa M, et al (2002). Tertiary relic deciduous forests on a humid subtropical mountain, Mt. Emei, Sichuan, China. Folia Geobot. 37: 93-106. http://dx.doi.org/10.1007/BF02803193 Tao C, Yang Z, Lu R, Liu T, et al (2012). Microsatellite markers for the relictual dove tree, Davidia involucrata (Cornaceae). Am. J. Bot. 99: e108-e110. http://dx.doi.org/10.3732/ajb.1100414 Wu J, Cai C, Cheng F, Cui H, et al (2014). Characterisation and development of EST-SSR markers in tree peony using transcriptome sequences. Mol. Breed. 34: 1853-1866. http://dx.doi.org/10.1007/s11032-014-0144-x You H, Fujiwara K, Liu Y, et al (2014). A preliminary vegetation-ecological study of Davidia involucrata forest. Nat. Sci. 6: 1012-1029. Zhang J, Ma W, Song X, Lin Q, et al (2014). Characterization and development of EST-SSR markers derived from transcriptome of yellow catfish. Molecules 19: 16402-16415. http://dx.doi.org/10.3390/molecules191016402  
A. W. Gichira, Long, Z. C., Wang, Q. F., Chen, J. M., Liao, K., Gichira, A. W., Long, Z. C., Wang, Q. F., Chen, J. M., and Liao, K., Development of expressed sequence tag-based microsatellite markers for the critically endangered Isoëtes sinensis (Isoetaceae) based on transcriptome analysis, vol. 15, p. -, 2016.
A. W. Gichira, Long, Z. C., Wang, Q. F., Chen, J. M., Liao, K., Gichira, A. W., Long, Z. C., Wang, Q. F., Chen, J. M., and Liao, K., Development of expressed sequence tag-based microsatellite markers for the critically endangered Isoëtes sinensis (Isoetaceae) based on transcriptome analysis, vol. 15, p. -, 2016.
A. W. Gichira, Long, Z. C., Hu, G. W., Gituru, R. W., Wang, Q. F., Chen, J. M., Gichira, A. W., Long, Z. C., Hu, G. W., Gituru, R. W., Wang, Q. F., and Chen, J. M., Development of microsatellite markers in Hagenia abyssinica (Bruce) J.F. Gmel, an endangered tropical tree of eastern Africa, using next-generation sequencing, vol. 15, p. -, 2016.
A. W. Gichira, Long, Z. C., Hu, G. W., Gituru, R. W., Wang, Q. F., Chen, J. M., Gichira, A. W., Long, Z. C., Hu, G. W., Gituru, R. W., Wang, Q. F., and Chen, J. M., Development of microsatellite markers in Hagenia abyssinica (Bruce) J.F. Gmel, an endangered tropical tree of eastern Africa, using next-generation sequencing, vol. 15, p. -, 2016.
X. Y. Yang, Long, Z. C., Gichira, A. W., Guo, Y. H., Wang, Q. F., Chen, J. M., Yang, X. Y., Long, Z. C., Gichira, A. W., Guo, Y. H., Wang, Q. F., and Chen, J. M., Development of microsatellite markers in the tetraploid fern Ceratopteris thalictroides (Parkeriaceae) using RAD tag sequencing, vol. 15, p. -, 2016.
X. Y. Yang, Long, Z. C., Gichira, A. W., Guo, Y. H., Wang, Q. F., Chen, J. M., Yang, X. Y., Long, Z. C., Gichira, A. W., Guo, Y. H., Wang, Q. F., and Chen, J. M., Development of microsatellite markers in the tetraploid fern Ceratopteris thalictroides (Parkeriaceae) using RAD tag sequencing, vol. 15, p. -, 2016.
S. Fu, Li, L. N., Long, Z. C., Ke, W. D., Ye, A. H., Guo, Y. H., Chen, J. M., Fu, S., Li, L. N., Long, Z. C., Ke, W. D., Ye, A. H., Guo, Y. H., Chen, J. M., Fu, S., Li, L. N., Long, Z. C., Ke, W. D., Ye, A. H., Guo, Y. H., and Chen, J. M., Evaluation of the taxonomic status of water dropwort (Oenanthe, Apiaceae) accessions from East Asia based on nuclear rDNA internal transcribed spacer sequences, vol. 15, p. -, 2016.
S. Fu, Li, L. N., Long, Z. C., Ke, W. D., Ye, A. H., Guo, Y. H., Chen, J. M., Fu, S., Li, L. N., Long, Z. C., Ke, W. D., Ye, A. H., Guo, Y. H., Chen, J. M., Fu, S., Li, L. N., Long, Z. C., Ke, W. D., Ye, A. H., Guo, Y. H., and Chen, J. M., Evaluation of the taxonomic status of water dropwort (Oenanthe, Apiaceae) accessions from East Asia based on nuclear rDNA internal transcribed spacer sequences, vol. 15, p. -, 2016.
S. Fu, Li, L. N., Long, Z. C., Ke, W. D., Ye, A. H., Guo, Y. H., Chen, J. M., Fu, S., Li, L. N., Long, Z. C., Ke, W. D., Ye, A. H., Guo, Y. H., Chen, J. M., Fu, S., Li, L. N., Long, Z. C., Ke, W. D., Ye, A. H., Guo, Y. H., and Chen, J. M., Evaluation of the taxonomic status of water dropwort (Oenanthe, Apiaceae) accessions from East Asia based on nuclear rDNA internal transcribed spacer sequences, vol. 15, p. -, 2016.
Y. Q. Xie, Chen, J. M., and Liu, Y., Interaction of the CYP1A1 gene polymorphism and smoking in non-small cell lung cancer susceptibility, vol. 14, pp. 19411-19417, 2016.
2012
C. Pan, You, Y. N., Diao, Y., Hu, Z. L., and Chen, J. M., Isolation and characterization of microsatellite loci for the herbaceous tuber crop, Amorphophallus konjac (Araceae), vol. 11, pp. 4617-4621, 2012.
Chua M, Baldwin TC, Hocking TJ and Chan K (2010). Traditional uses and potential health benefits of Amorphophallus konjac K. Koch ex N.E.Br. J. Ethnopharmacol. 128: 268-278. http://dx.doi.org/10.1016/j.jep.2010.01.021 PMid:20079822   Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15.   Excoffier L, Laval G and Schneider S (2005). Arlequin (version 3.0): An integrated software package for population genetics data analysis. Evol. Bioinfom. Online 1: 47-50. PMCid:2658868   Gao PY (2004). Konjac. China Agriculture Press, Beijing.   Rozen S and Skaletsky HJ (2000). Primer 3 on the WWW for General Users and for Biologist Programmers. In: Bioinformatics Methods and Protocols: Methods in Molecular Biology (Krawetz S and Misener S, eds.). Humana Press, Totowa, 365-386. PMid:10547847   Teng CZ, Diao Y, Chang FH, Xie SQ, et al. (2006). ISSR analyses of relative relationships among germplasm resources of Amorphophallus Blume from Yunnan Province. Anhui Agric. Sci. Bull. 12: 54-56.   Xuan M (2010). Diversity of Morphology and ISSR Analysis of Amorphophallus Germplasm. Master's thesis, Southwest University, Chongqing.   Zane L, Bargelloni L and Patarnello T (2002). Strategies for microsatellite isolation: a review. Mol. Ecol. 11: 1-16. http://dx.doi.org/10.1046/j.0962-1083.2001.01418.x PMid:11903900   Zhang YJ, Zhang XG, Zhang XG and Feng J (2001). RAPD analysis of Amorphophallus germplasms. J. Southwest Agric. Univ. 23: 418-421.