Publications
Found 16 results
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“Analysis of genetic diversity and population structure in a tomato (Solanum lycopersicum L.) germplasm collection based on single nucleotide polymorphism markers”, vol. 15, p. -, 2016.
, “Analysis of genetic diversity and population structure in a tomato (Solanum lycopersicum L.) germplasm collection based on single nucleotide polymorphism markers”, vol. 15, p. -, 2016.
, “Analysis of genetic diversity of Brassica rapa var. chinensis using ISSR markers and development of SCAR marker specific for Fragrant Bok Choy, a product of geographic indication”, vol. 15, p. -, 2016.
, “Analysis of genetic diversity of Brassica rapa var. chinensis using ISSR markers and development of SCAR marker specific for Fragrant Bok Choy, a product of geographic indication”, vol. 15, p. -, 2016.
, “Analysis of genetic diversity of Brassica rapa var. chinensis using ISSR markers and development of SCAR marker specific for Fragrant Bok Choy, a product of geographic indication”, vol. 15, p. -, 2016.
, “Two-step identification of taro (Colocasia esculenta cv. Xinmaoyu) using specific psbE-petL and simple sequence repeat-sequence characterized amplified regions (SSR-SCAR) markers”, vol. 15, p. -, 2016.
, “Two-step identification of taro (Colocasia esculenta cv. Xinmaoyu) using specific psbE-petL and simple sequence repeat-sequence characterized amplified regions (SSR-SCAR) markers”, vol. 15, p. -, 2016.
, , , “Applying DNA barcodes for identification of economically important species in Brassicaceae”, vol. 14, pp. 15050-15061, 2015.
, “An expression profiling analysis of hybrid millet and its parents at grain filling stage”, vol. 14, pp. 7821-7832, 2015.
, “Phylogenetic analysis of widely cultivated Ganoderma in China based on the mitochondrial V4-V6 region of SSU rDNA”, vol. 14, pp. 886-897, 2015.
, “Transcriptomic analysis of Camellia ptilophylla and identification of genes associated with flavonoid and caffeine biosynthesis”, vol. 14, pp. 18731-18742, 2015.
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“Protein interaction and microRNA network analysis in osteoarthritis meniscal cells”, vol. 12, pp. 738-746, 2013.
, Abramson SB and Attur M (2009). Developments in the scientific understanding of osteoarthritis. Arthritis Res. Ther. 11: 227.
http://dx.doi.org/10.1186/ar2655
PMid:19519925 PMCid:2714096
Barre PE, Redini F, Boumediene K, Vielpeau C, et al. (2000). Semiquantitative reverse transcription-polymerase chain reaction analysis of syndecan-1 and -4 messages in cartilage and cultured chondrocytes from osteoarthritic joints. Osteoarthritis Cartilage 8: 34-43.
http://dx.doi.org/10.1053/joca.1999.0286
PMid:10607497
Gobezie R, Kho A, Krastins B, Sarracino DA, et al. (2007). High abundance synovial fluid proteome: distinct profiles in health and osteoarthritis. Arthritis Res. Ther. 9: R36.
http://dx.doi.org/10.1186/ar2172
PMid:17407561 PMCid:1906814
Hardingham T (2008). Extracellular matrix and pathogenic mechanisms in osteoarthritis. Curr. Rheumatol. Rep. 10: 30-36.
http://dx.doi.org/10.1007/s11926-008-0006-9
PMid:18457609
Hopwood B, Tsykin A, Findlay DM and Fazzalari NL (2007). Microarray gene expression profiling of osteoarthritic bone suggests altered bone remodelling, WNT and transforming growth factor-beta/bone morphogenic protein signalling. Arthritis Res. Ther. 9: R100.
http://dx.doi.org/10.1186/ar2301
PMid:17900349 PMCid:2212557
Huang dW, Sherman BT and Lempicki RA (2009). Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4: 44-57.
Ikeda S, He A, Kong SW, Lu J, et al. (2009). MicroRNA-1 negatively regulates expression of the hypertrophy-associated calmodulin and Mef2a genes. Mol. Cell Biol. 29: 2193-2204.
http://dx.doi.org/10.1128/MCB.01222-08
PMid:19188439 PMCid:2663304
Ivanov AI and Romanovsky AA (2006). Putative dual role of ephrin-Eph receptor interactions in inflammation. IUBMB Life 58: 389-394.
http://dx.doi.org/10.1080/15216540600756004
PMid:16801213
Jiang Q, Wang Y, Hao Y, Juan L, et al. (2009). miR2Disease: a manually curated database for microRNA deregulation in human disease. Nucleic Acids Res. 37: D98-104.
http://dx.doi.org/10.1093/nar/gkn714
PMid:18927107 PMCid:2686559
Joos H, Albrecht W, Laufer S, Reichel H, et al. (2008). IL-1beta regulates FHL2 and other cytoskeleton-related genes in human chondrocytes. Mol. Med. 14: 150-159.
http://dx.doi.org/10.2119/2007-00138.Joos
PMid:18224250 PMCid:2213891
Kawahara C, Forster T, Chapman K, Carr A, et al. (2005). Genetic association analysis of the IGFBP7, ADAMTS3, and IL8 genes as the potential osteoarthritis susceptibility that maps to chromosome 4q. Ann. Rheum. Dis. 64: 474-476.
http://dx.doi.org/10.1136/ard.2004.027342
PMid:15708897 PMCid:1755421
Keshava Prasad TS, Goel R, Kandasamy K, Keerthikumar S, et al. (2009). Human Protein Reference Database - 2009 update. Nucleic Acids Res. 37: D767-D772.
http://dx.doi.org/10.1093/nar/gkn892
PMid:18988627 PMCid:2686490
Liu Y, Patel S, Nibbe R, Maxwell S, et al. (2011). Systems biology analyses of gene expression and genome wide association study data in obstructive sleep apnea. Pac. Symp. Biocomput. 14-25.
PMid:21121029
Lu M, Zhang Q, Deng M, Miao J, et al. (2008). An analysis of human microRNA and disease associations. PLoS One 3: e3420.
http://dx.doi.org/10.1371/journal.pone.0003420
PMid:18923704 PMCid:2559869
Luyten FP, Tylzanowski P and Lories RJ (2009). Wnt signaling and osteoarthritis. Bone 44: 522-527.
http://dx.doi.org/10.1016/j.bone.2008.12.006
PMid:19136083
Martel-Pelletier J (2004). Pathophysiology of osteoarthritis. Osteoarthritis. Cartilage. 12 (Suppl A): S31-S33.
http://dx.doi.org/10.1016/j.joca.2003.10.002
PMid:14698638
Martel-Pelletier J, Di Battista JA, Lajeunesse D and Pelletier JP (1998). IGF/IGFBP axis in cartilage and bone in osteoarthritis pathogenesis. Inflamm. Res. 47: 90-100.
http://dx.doi.org/10.1007/s000110050288
PMid:9562333
Papadopoulos GL, Reczko M, Simossis VA, Sethupathy P, et al. (2009). The database of experimentally supported targets: a functional update of TarBase. Nucleic Acids Res. 37: D155-D158.
http://dx.doi.org/10.1093/nar/gkn809
PMid:18957447 PMCid:2686456
Poulou M, Kaliakatsos M, Tsezou A, Kanavakis E, et al. (2008). Association of the CALM1 core promoter polymorphism with knee osteoarthritis in patients of Greek origin. Genet. Test. 12: 263-265.
http://dx.doi.org/10.1089/gte.2007.0114
PMid:18452398
Rousseau JC and Delmas PD (2007). Biological markers in osteoarthritis. Nat. Clin. Pract. Rheumatol. 3: 346-356.
http://dx.doi.org/10.1038/ncprheum0508
PMid:17538566
Salminen-Mankonen H, Saamanen AM, Jalkanen M, Vuorio E, et al. (2005). Syndecan-1 expression is upregulated in degenerating articular cartilage in a transgenic mouse model for osteoarthritis. Scand. J. Rheumatol. 34: 469-474.
http://dx.doi.org/10.1080/03009740500304338
PMid:16393771
Sarzi-Puttini P, Cimmino MA, Scarpa R, Caporali R, et al. (2005). Osteoarthritis: an overview of the disease and its treatment strategies. Semin. Arthritis Rheum. 35: 1-10.
http://dx.doi.org/10.1016/j.semarthrit.2005.01.013
PMid:16084227
Shahrara S, Volin MV, Connors MA, Haines GK, et al. (2002). Differential expression of the angiogenic Tie receptor family in arthritic and normal synovial tissue. Arthritis Res. 4: 201-208.
http://dx.doi.org/10.1186/ar407
PMid:12010571 PMCid:111023
Smyth GK (2004). Linear models and empirical bayes methods for assessing differential expression in microarray experiments. Stat. Appl. Genet Mol. Biol. 3: Article3.
Stark C, Breitkreutz BJ, Chatr-Aryamontri A, Boucher L, et al. (2011). The BioGRID Interaction Database: 2011 update. Nucleic Acids Res. 39: D698-D704.
http://dx.doi.org/10.1093/nar/gkq1116
PMid:21071413 PMCid:3013707
Subramanian A, Sharma AK, Banerjee D, Jiang WG, et al. (2007). Evidence for a tumour suppressive function of IGF1- binding proteins in human breast cancer. Anticancer Res. 27: 3513-3518.
PMid:17972510
Sun Y, Mauerhan DR, Honeycutt PR, Kneisl JS, et al. (2010). Analysis of meniscal degeneration and meniscal gene expression. BMC Musculoskelet. Disord. 11: 19.
http://dx.doi.org/10.1186/1471-2474-11-19
PMid:20109188 PMCid:2828422
Todoerti K, Barbui V, Pedrini O, Lionetti M, et al. (2010). Pleiotropic anti-myeloma activity of ITF2357: inhibition of interleukin-6 receptor signaling and repression of miR-19a and miR-19b. Haematologica 95: 260-269.
http://dx.doi.org/10.3324/haematol.2009.012088
PMid:19713220 PMCid:2817029
Valdes AM, Loughlin J, Oene MV, Chapman K, et al. (2007). Sex and ethnic differences in the association of ASPN, CALM1, COL2A1, COMP, and FRZB with genetic susceptibility to osteoarthritis of the knee. Arthritis Rheum. 56: 137-146.
http://dx.doi.org/10.1002/art.22301
PMid:17195216
Wu X and Song Y (2011). Preferential regulation of miRNA targets by environmental chemicals in the human genome. BMC Genomics 12: 244.
http://dx.doi.org/10.1186/1471-2164-12-244
PMid:21592377 PMCid:3118786
Xiao F, Zuo Z, Cai G, Kang S, et al. (2009). miRecords: an integrated resource for microRNA-target interactions. Nucleic Acids Res. 37: D105-D110.
http://dx.doi.org/10.1093/nar/gkn851
PMid:18996891 PMCid:2686554
Yang JH, Li JH, Shao P, Zhou H, et al. (2011). starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data. Nucleic Acids Res. 39: D202-D209.
http://dx.doi.org/10.1093/nar/gkq1056
PMid:21037263 PMCid:3013664
“Meta-analysis of epidemiological studies of association of two polymorphisms in the interleukin-10 gene promoter and colorectal cancer risk”, vol. 11, pp. 3389-3397, 2012.
,
Baniyash M (2006). Chronic inflammation, immunosuppression and cancer: new insights and outlook. Semin. Cancer Biol. 16: 80-88.
http://dx.doi.org/10.1016/j.semcancer.2005.12.002
PMid:16420981
Breslow NE and Day NE (1987). Statistical methods in cancer research. Volume II - The design and analysis of cohort studies. IARC Sci. Publ.1-406.
Bulpitt EA, Baynesc C, Dunning AM, Evans PR, et al. (2004). Investigation of interleukin-10 and vascular endothelial growth factor single nucleotide polymorphisms in predisposition to breast cancer. Genes Immun. 5: S1-S53.
Cacev T, Radosevic S, Krizanac S and Kapitanovic S (2008). Influence of interleukin-8 and interleukin-10 on sporadic colon cancer development and progression. Carcinogenesis 29: 1572-1580.
http://dx.doi.org/10.1093/carcin/bgn164
PMid:18628251
Chan AT, Ogino S and Fuchs CS (2007). Aspirin and the risk of colorectal cancer in relation to the expression of COX-2. N. Engl. J. Med. 356: 2131-2142.
http://dx.doi.org/10.1056/NEJMoa067208
PMid:17522398
Cozar JM, Romero JM, Aptsiauri N, Vazquez F, et al. (2007). High incidence of CTLA-4 AA (CT60) polymorphism in renal cell cancer. Hum. Immunol. 68: 698-704.
http://dx.doi.org/10.1016/j.humimm.2007.05.002
PMid:17678726
Crawley E, Kay R, Sillibourne J, Patel P, et al. (1999). Polymorphic haplotypes of the interleukin-10 5' flanking region determine variable interleukin-10 transcription and are associated with particular phenotypes of juvenile rheumatoid arthritis. Arthritis Rheum. 42: 1101-1108.
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Crivello A, Giacalone A, Vaglica M, Scola L, et al. (2006). Regulatory cytokine gene polymorphisms and risk of colorectal carcinoma. Ann. N. Y. Acad. Sci. 1089: 98-103.
http://dx.doi.org/10.1196/annals.1386.002
PMid:17261758
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De Vita F, Orditura M, Galizia G, Romano C, et al. (1999). Serum interleukin-10 levels in patients with advanced gastrointestinal malignancies. Cancer 86: 1936-1943.
http://dx.doi.org/10.1002/(SICI)1097-0142(19991115)86:10<1936::AID-CNCR9>3.0.CO;2-9
Eskdale J, Kube D, Tesch H and Gallagher G (1997). Mapping of the human IL10 gene and further characterization of the 5' flanking sequence. Immunogenetics 46: 120-128.
http://dx.doi.org/10.1007/s002510050250
PMid:9162098
Eskdale J, Gallagher G, Verweij CL, Keijsers V, et al. (1998). Interleukin 10 secretion in relation to human IL-10 locus haplotypes. Proc. Natl. Acad. Sci. U. S. A. 95: 9465-9470.
http://dx.doi.org/10.1073/pnas.95.16.9465
PMid:9689103 PMCid:21361
Gunter MJ, Canzian F, Landi S, Chanock SJ, et al. (2006). Inflammation-related gene polymorphisms and colorectal adenoma. Cancer Epidemiol. Biomarkers Prev. 15: 1126-1131.
http://dx.doi.org/10.1158/1055-9965.EPI-06-0042
PMid:16775170
Hanada T and Yoshimura A (2002). Regulation of cytokine signaling and inflammation. Cytokine Growth Factor Rev. 13: 413-421.
http://dx.doi.org/10.1016/S1359-6101(02)00026-6
Howell WM and Rose-Zerilli MJ (2007). Cytokine gene polymorphisms, cancer susceptibility, and prognosis. J. Nutr. 137: 194S-199S.
PMid:17182825
Lakatos PL and Lakatos L (2008). Risk for colorectal cancer in ulcerative colitis: changes, causes and management strategies. World J. Gastroenterol. 14: 3937-3947.
http://dx.doi.org/10.3748/wjg.14.3937
PMid:18609676 PMCid:2725331
Lee YS, Choi HB, Lee IK, Kim TG, et al. (2010). Association between interleukin-4R and TGF-beta1 gene polymorphisms and the risk of colorectal cancer in a Korean population. Colorectal Dis. 12: 1208-1212.
http://dx.doi.org/10.1111/j.1463-1318.2009.02080.x
PMid:19863607
Macarthur M, Sharp L, Hold GL, Little J, et al. (2005). The role of cytokine gene polymorphisms in colorectal cancer and their interaction with aspirin use in the northeast of Scotland. Cancer Epidemiol. Biomarkers Prev. 14: 1613-1618.
http://dx.doi.org/10.1158/1055-9965.EPI-04-0878
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Shin HD, Park BL, Kim LH, Jung JH, et al. (2003). Interleukin 10 haplotype associated with increased risk of hepatocellular carcinoma. Hum. Mol. Genet. 12: 901-906.
http://dx.doi.org/10.1093/hmg/ddg104
PMid:12668613
Siegel R, Naishadham D and Jemal A (2012). Cancer statistics, 2012. CA Cancer J. Clin. 62: 10-29.
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Sturlan S, Oberhuber G, Beinhauer BG, Tichy B, et al. (2001). Interleukin-10-deficient mice and inflammatory bowel disease associated cancer development. Carcinogenesis 22: 665-671.
http://dx.doi.org/10.1093/carcin/22.4.665
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Talseth BA, Meldrum C, Suchy J, Kurzawski G, et al. (2007). Lack of association between genetic polymorphisms in cytokine genes and disease expression in patients with hereditary non-polyposis colorectal cancer. Scand. J. Gastroenterol. 42: 628-632.
http://dx.doi.org/10.1080/00365520601106699
PMid:17454884
Triantafillidis JK, Nasioulas G and Kosmidis PA (2009). Colorectal cancer and inflammatory bowel disease: epidemiology, risk factors, mechanisms of carcinogenesis and prevention strategies. Anticancer Res. 29: 2727-2737.
PMid:19596953
Tsilidis KK, Helzlsouer KJ, Smith MW, Grinberg V, et al. (2009). Association of common polymorphisms in IL10, and in other genes related to inflammatory response and obesity with colorectal cancer. Cancer Causes Control. 20: 1739-1751.
http://dx.doi.org/10.1007/s10552-009-9427-7
PMid:19760027
Tuynman JB, Peppelenbosch MP and Richel DJ (2004). COX-2 inhibition as a tool to treat and prevent colorectal cancer. Crit. Rev. Oncol. Hematol. 52: 81-101.
PMid:15501074
Vidal-Vanaclocha F (2009). Inflammation in the molecular pathogenesis of cancer and atherosclerosis. Reumatol. Clin. 5S1: 40-43.
Vogel U, Christensen J, Dybdahl M, Friis S, et al. (2007). Prospective study of interaction between alcohol, NSAID use and polymorphisms in genes involved in the inflammatory response in relation to risk of colorectal cancer. Mutat. Res. 624: 88-100.
http://dx.doi.org/10.1016/j.mrfmmm.2007.04.006
PMid:17544013
Wilkening S, Tavelin B, Canzian F, Enquist K, et al. (2008). Interleukin promoter polymorphisms and prognosis in colorectal cancer. Carcinogenesis 29: 1202-1206.
http://dx.doi.org/10.1093/carcin/bgn101
PMid:18448485
Xie J and Itzkowitz SH (2008). Cancer in inflammatory bowel disease. World J. Gastroenterol. 14: 378-389.
http://dx.doi.org/10.3748/wjg.14.378
PMid:18200660 PMCid:2679126
Zheng C, Huang D, Liu L, Wu R, et al. (2001). Interleukin-10 gene promoter polymorphisms in multiple myeloma. Int. J. Cancer 95: 184-188.
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