Publications

Found 7 results
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2011
C. G. Oliveira, Martinez, R. A., Giné, G. A. F., Faria, D. M., and Gaiotto, F. A., Genetic assessment of the Atlantic Forest bristle porcupine, Chaetomys subspinosus (Rodentia: Erethizontidae), an endemic species threatened with extinction, vol. 10, pp. 923-931, 2011.
Catzeflis F, Patton J, Percequillo A, Bonvicino C, et al. (2008). Chaetomys subspinosus. IUCN Red List of Threatened Species. Version 2009. Available at [http://www.iucnredlist.org/apps/redlist/details/4366/0]. Accessed November 21, 2010. Chiarello AG, Passamani M and Zortéa M (1997). Field observations on the thin-spined porcupine, Chaetomys subspinosus (Rodentia: Echimyidae). Mammalia 61: 29-36. doi:10.1515/mamm.1997.61.1.29 Conner JK and Hartl DL (2004). A Primer of Ecological Genetics. 1st edn. Sinauer Associates, Inc., Sunderland. Excoffier L, Smouse PE and Quattro JM (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491. Faria D, Laps RR, Baumgarten J and Cetra M (2006). Bat and bird assemblages from forests and shade cacao plantations in two contrasting landscapes in the Atlantic Forest of southern Bahia, Brazil. Biodivers. Conserv. 15: 587-612. doi:10.1007/s10531-005-2089-1 Faria D, Paciencia MLB, Dixo M and Laps RR (2007). Ferns, frogs, lizards, birds and bats in forest fragments and shade cacao plantations of two contrasting landscapes in the Atlantic Forest, Brazil. Biodivers. Conserv. 16: 2335-2357. doi:10.1007/s10531-007-9189-z Faria PJ and Miyaki CY (2006). Molecular markers for population genetic analyses in the family Psittacidae (Psittaciformes, Aves). Genet. Mol. Biol. 29: 231-240. doi:10.1590/S1415-47572006000200007 Fernandes-Matioli FMC, Matioli SR and Almeida-Toledo LF (2000). Species diversity and geographic distribution of Gymnotus (Pisces: Gymnotiformes) by nuclear (GGAC)n microsatellite analysis. Genet. Mol. Biol. 23: 803-807. doi:10.1590/S1415-47572000000400016 Frankham R, Ballou JD and Briscoe DA (2002). Introduction to Conservation Genetics. Cambridge University Press, Cambridge. Giné GAF, Duarte JMB and Faria D (2010). Feeding ecology of a selective folivore, the thin-spined porcupine (Chaetomys subspinosus) in the Atlantic Forest. J. Mammal. 91: 931-941. doi:10.1644/09-MAMM-A-185.1 Gupta M, Chyi YS, Romero-Severson J and Owen JL (1994). Amplification of DNA markers from evolutionarily diverse genomes using single primers of simple-sequence repeats. Theor. Appl. Genet. 89: 998-1006. doi:10.1007/BF00224530 Huff DR, Peakall LR and Smouse PE (1993). RAPD variation within and among natural populations of outcrossing buffalograss (Buchloe dactyloides (Nutt.) Engelm.). Theor. Appl. Genet. 86: 927-934. doi:10.1007/BF00211043 IPEMA (2005). Conservação da Mata Atlântica no Estado do Espírito Santo: Cobertura Florestal e Unidades de Conservação. IPEMA, Vitória. Miller MP (1998). AMOVA-PREP. Department of Biological Sciences, Flagstaff. MMA (2006). O Corredor Central da Mata Atlântica: uma Nova Escala de Conservação da Biodiversidade. Conservação Internacional e Fundação SOS Mata Atlântica, Brasília. MMA (2011). Lista Nacional das Espécies da Fauna Brasileira Ameaçadas de Extinção. Available at [http://homolog-w.mma.gov.br/index.php?ido=conteudo.monta&idEstrutura=179&idConteudo=8110&idMenu=8617]. Accessed May 9, 2011. Moojen J (1952). Os Roedores do Brasil. Instituto Nacional do Livro, Rio de Janeiro. Moraes N, Morgante JS and Miyaki CY (2002). Genetic diversity in different populations of sloths assessed by DNA fingerprinting. Braz. J. Biol. 62: 503-508. doi:10.1590/S1519-69842002000300015 Moritz C (1994). Defining evolutionary significant units for conservation. Trends Ecol. Evol. 9: 373-375. doi:10.1016/0169-5347(94)90057-4 Nowak RM and Paradiso JL (1983). Walker’s Mammals of the World. The Johns Hopkins University Press, Baltimore, London. Nei M (1987). Molecular Evolutionary Genetics. Columbia University Press, New York. Oliveira CG, Martinez RA and Gaiotto FA (2007). DNA extraction from bristles and quills of Chaetomys subspinosus (Rodentia: Erethizonthidae) using a novel protocol. Genet. Mol. Res. 6: 657-666. Oliver WLR and Santos IB (1991). Threatened Endemic Mammals of the Atlantic Forest Region of South-East Brazil. J. Jersey Wildl, Preservation Trust, Special Scientific Report. Parker KA (2008). Translocations: providing outcomes for wildlife, resource managers, scientists, and the human community. Restor. Ecol. 16: 204-209. doi:10.1111/j.1526-100X.2008.00388.x Rohlf FJ (1992). NTSYS-pc Numerical Taxonomy and Multivariate Analysis System Vers. 1.70. Exeter Software, Setauket. Roze U (2009). The North American Porcupine. 2nd edn. Cornell University Press, Ithaca. Santos IB, Oliver WL and Rylands AB (1987). Distribution and status of two tree porcupines. Chaetomys subspinosus and Sphiggurus insidiousus in south-east Brazil. J. Jersey Wildl. 24: 43-60. Vilela RV, Machado T, Ventura K, Fagundes V, et al. (2009). The taxonomic status of the endangered thin-spined porcupine, Chaetomys subspinosus (Olfers, 1818), based on molecular and karyologic data. BMC Evol. Biol. 9: 29. doi:10.1186/1471-2148-9-29 Williams JG, Kubelik AR, Livak KJ, Rafalski JA, et al. (1990). DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18: 6531-6535. doi:10.1093/nar/18.22.6531
C. G. Oliveira, Gaiotto, F. A., Costa, M. A., and Martinez, R. A., Molecular genetic analysis of the yellow-breasted capuchin monkey: recommendations for ex situ conservation, vol. 10, pp. 1471-1478, 2011.
Amaral JM, Simoes AL and De Jong D (2005). Allele frequencies and genetic diversity in two groups of wild tufted capuchin monkeys (Cebus apella nigritus) living in an urban forest fragment. Genet. Mol. Res. 4: 832-838. PMid:16475131 Bandelt HJ, Forster P and Rohl A (1999). Median-joining networks for inferring intraspecific phylogenies. Mol. Biol. Evol. 16: 37-48. PMid:10331250 Belkhir K, Borsa P, Chikhi L and Raufaste N (2004). GENETIX 4.05, Logiciel sous Windows TM pour la Genetique des Populations. Laboratoire Génome, Populations, Interactions, CNRS UMR 5171, Université de Montpellier II, Montpellier. Bohle UR and Zischler H (2002). Polymorphic microsatellite loci for the moustached tamarin (Saguinus mystax) and their cross-species amplification in the New World monkeys. Mol. Ecol. Notes 2: 1-3. Boutin-Ganache I, Raposo M, Raymond M and Deschepper CF (2001). M13-tailed primers improve the readability and usability of microsatellite analyses performed with two different allele-sizing methods. Biotechniques 31: 24-6, 28. PMid:11464515 Caballero A, Rodríguez-Ramilo ST, Ávila V and Fernández J (2010). Management of genetic diversity of subdivided populations in conservation programmes. Conserv. Genet. 11: 409-419. doi:10.1007/s10592-009-0020-0 Callen DF, Thompson AD, Shen Y, Phillips HA, et al. (1993). Incidence and origin of “null” alleles in the (AC)n microsatellite markers. Am. J. Hum. Genet. 52: 922-927. PMid:8488841    PMCid:1682051 Coimbra-Filho AF, Rylands AB, Pissinatti A and Santos IB (1992). The distribution and status of the buff-headed capuchin monkey, Cebus xanthosternos Wied 1820, in the Atlantic Forest region of eastern Brazil. Prim. Conserv. 12/13: 24-30. Ellsworth JA and Hoelzer GA (1998). Characterization of microsatellite loci in a New World primate, the mantled howler monkey (Alouatta palliata). Mol. Ecol. 7: 657-658. PMid:9633106 Escobar-Paramo P (2000). Microsatellite primers for the wild brown capuchin monkey Cebus apella. Mol. Ecol. 9: 107- 108. doi:10.1046/j.1365-294x.2000.00764.x PMid:10652080 Gilligan DM and Frankham R (2003). Dynamics of genetic adaptation to captivity. Conserv. Genet. 4: 189-197. doi:10.1023/A:1023391905158 Kierulff MCM, Santos GR, Canale GR and Guidorizzi CE (2005). Plano de Manejo para a Conservação do Macaco-Prego-do-Peito-Amarelo, Cebus xanthosternos. Relatório apresentado ao PROBIO-MMA. Kocher TD, Thomas WK, Meyer A, Edwards SV, et al. (1989). Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proc. Natl. Acad. Sci. U. S. A. 86: 6196-6200. doi:10.1073/pnas.86.16.6196 Martini AMZ, Fiaschi P, Amorim AM and Paixão JL (2007). A hot-point within a hot-spot: a high diversity site in Brazil’s Atlantic Forest. Biodiv. Cons. 16: 3111-3128. Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. PMid:17248844    PMCid:1213855 Oliver WLR and Santos IB (1991). Threatened endemic mammals of the atlantic forest region of South-East Brazil. J. Wildl. Preserv. Trust 4: 1-126. Oosterhout CV, Hutchinson WF, Wills DPM and Shipley P (2004). MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 4: 535-538. doi:10.1111/j.1471-8286.2004.00684.x Ramirez O, Laura A, Enseñat C, Vilà C, et al. (2006). Genetic assessment of the Iberian wolf Canis lupus signatus captive breeding program. Conserv. Genet. 7: 861-878. doi:10.1007/s10592-006-9123-z Rudnick JA and Lacy RC (2008). The impact of assumptions about founder relationships on the effectiveness of captive breeding strategies. Conserv. Genet. 9: 1439-1450. doi:10.1007/s10592-007-9472-2 Rylands AB, Kierulff MCM and Mittermeier RA (2005). Notes on the taxonomy and distributions of the tufted capuchin monkeys (Cebus, Cebidae) of South America. Lundiana 6: 97-110. Sbisá E, Tanzariello F, Reyes F, Pesole G, et al. (1997). Mammalian mitochondrial D-loop region structural analysis: identification of new conserved sequences and the functional and evolutionary implications. Gene 205: 125-140. doi:10.1016/S0378-1119(97)00404-6 Templeton AR (2001). Using phylogeographic analyses of gene trees to test species status and processes. Mol. Ecol. 10: 779-791. doi:10.1046/j.1365-294x.2001.01199.x Thompson JD, Higgins DG and Gibson TJ (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680. doi:10.1093/nar/22.22.4673 PMid:7984417    PMCid:308517 Tzika AC, Remy C, Gibson R and Milinkovitch MC (2009). Molecular genetic analysis of a captive-breeding program: the vulnerable endemic Jamaican yellow boa. Conserv. Genet. 10: 69-77. doi:10.1007/s10592-008-9519-z Witte SM and Rogers J (1999). Microsatellite polymorphisms in Bolivian squirrel monkeys (Saimiri boliviensis). Am. J. Primatol. 47: 75-84. doi:10.1002/(SICI)1098-2345(1999)47:1<75::AID-AJP9>3.0.CO;2-1