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2016
T. L. Varella, Rossi, A. A. B., Dardengo, J. F. E., Silveira, G. F., Souza, M. D. A., and Carvalho, M. L. S., Effect of fragmentation on the natural genetic diversity of Theobroma speciosum Willd. ex Spreng. populations, vol. 15, no. 4, p. -, 2016.
Conflicts of interestThe authors declare no conflict of interest.ACKNOWLEDGMENTSResearch supported by Fundação de Amparo à Pesquisa do Estado de Mato Grosso (FAPEMAT) (Project: Diversidade, Conservação e Uso de Recursos Genéticos de Quatro Espécies Amazônicas de Theobroma com Potencial Econômico para a Região). CAPES/FAPEMAT scholarships were granted to the first author. REFERENCESAlves RM, Sebbenn AM, Artero AS, Clement C, et al (2007). High levels of genetic divergence and inbreeding in populations of cupuaçu (Theobroma grandiflorum). Tree Genet. Genomes 3: 289-298. http://dx.doi.org/10.1007/s11295-006-0066-9 Alves RM, Silva CRS, Silva MSC, Silva DCS, et al (2013). Diversidade genética em coleções amazônicas de germoplasma de cupuaçuzeiro. Rev. Bras. Frutic. 35: 818-828. http://dx.doi.org/10.1590/S0100-29452013000300019 Botstein D, White RL, Skolnick M, Davis RW, et al (1980). Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am. J. Hum. Genet. 32: 314-331. Boza EJ, Irish BM, Meerow AW, Tondo CL, et al (2013). Genetic diversity, conservation, and utilization of Theobroma cacao L.: genetic resources in the Dominican Republic. Genet. Resour. Crop Evol. 60: 605-619. http://dx.doi.org/10.1007/s10722-012-9860-4 Carvalho ACM, Freitas MLM, Moraes SMB, Moraes MLT, et al (2010). Diversidade genética, endogamia e fluxo gênico em pequena população fragmentada de Copaifera langsdorffii. Rev. Bras. Bot. Braz. J. Bot. 33: 599-606. Costa TS, Silva AVC, Ledó AS, de SilvaJFJret al. (2011). Diversidade genética de acessos do banco de germoplasma de mangaba em Sergipe. Pesq. Agropec. Bras. 46: 499-508. http://dx.doi.org/10.1590/S0100-204X2011000500007 Cuatrecasas J, et al (1964). Cacao and its allies: a taxonomic revision of the genus Theobroma. Contribution from the United States National Herbarium, Washington 35: 379-614. Doyle JJ, Doyle JL, et al (1990). Isolation of plant DNA from fresh tissue. Focus 12: 13-15. Evanno G, Regnaut S, Goudet J, et al (2005). Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol. Ecol. 14: 2611-2620. http://dx.doi.org/10.1111/j.1365-294X.2005.02553.x Ferrão JEM (2001). Fruticultura tropical: espécies com frutos comestíveis. 1st edn. Instituto de Investigação Científica Tropical, Lisboa. Hamrick JL, Godt MJW, Murawski DA and Loveless MD (1991). Correlations between species traits and allozyme diversity: implications for conservation biology. In: Genetic and conservation of rare plants (Falk DA and Holsinger KE, eds.). Oxford University Press, Oxford. Kumar S, Tamura K, Nei M, et al (2004). MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief. Bioinform. 5: 150-163. http://dx.doi.org/10.1093/bib/5.2.150 Lanaud C, Risterucci AM, Pieretti I, Falque M, et al (1999). Isolation and characterization of microsatellites in Theobroma cacao L. Mol. Ecol. 8: 2141-2143. http://dx.doi.org/10.1046/j.1365-294x.1999.00802.x Liu K, Muse SV, et al (2005). PowerMarker: an integrated analysis environment for genetic marker analysis. Bioinformatics 21: 2128-2129. http://dx.doi.org/10.1093/bioinformatics/bti282 Motamayor JC, Risterucci AM, Lopez PA, Ortiz CF, et al (2002). Cacao domestication I: the origin of the cacao cultivated by the Mayas. Heredity (Edinb) 89: 380-386. http://dx.doi.org/10.1038/sj.hdy.6800156 Nei M, Tajima F, Tateno Y, et al (1983). Accuracy of estimated phylogenetic trees from molecular data. II. Gene frequency data. J. Mol. Evol. 19: 153-170. http://dx.doi.org/10.1007/BF02300753 Neto GG, Silva FHB, et al (2011). Plantas da Amazônia Mato-Grossense: o cacauí- Theobroma speciosum Willd. ex Spreng. (Malvaceae). Flovet 3: 200-209. Peakall R, Smouse PE, et al (2006). GenAlEx 6: Genetic analysis in Excel. Population genetic software for teaching and research. Mol. Ecol. 6: 288-295. http://dx.doi.org/10.1111/j.1471-8286.2005.01155.x Pritchard JK and Wen W (2004). Documentation for Structure software: Version 2.1. Available at [http://pritch.bsd.uchicago.edu]. Accessed August 20, 2015. Pritchard JK, Stephens M, Donnelly P, et al (2000). Inference of population structure using multilocus genotype data. Genetics 155: 945-959. Romão LRC, Perseguini JMKC and Rubiano LB (2011). Divergência genética de Seringueira Baseado em Marcadores EST-SSRs. 5th Congresso Interinstitucional de Iniciação Científica-CIIC 2011 9 a 11 de agosto de 2011. Campinas. Sebbenn AM, Carvalho ACM, Freitas MLM, Moraes SM, et al (2011). Low levels of realized seed and pollen gene flow and strong spatial genetic structure in a small, isolated and fragmented population of the tropical tree Copaifera langsdorffii Desf. Heredity (Edinb) 106: 134-145. http://dx.doi.org/10.1038/hdy.2010.33 Sena MC, Oliveira MCS, Reginato LCA, Roese AD, et al. (2007). Fundamentos teórico-práticos e protocolos de extração e de amplificação de DNA por meio da técnica de reação em cadeia da polimerase. Embrapa Pecuária Sudeste, São Carlos. Sereno ML, Albuquerque PSB, Vencovsky R, et al (2006). Genetic diversity and natural population structure of cacao (Theobroma cacao L.) from the Brazilian Amazon evaluated by microsatellite markers. Conserv. Genet. 6: 13-24. http://dx.doi.org/10.1007/s10592-005-7568-0 Silva AR, Martins MB, et al (2004). A new anthophilic species of Drosophila Fallén belonging to the bromeliae group of species (Diptera, Drosophilidae). Rev. Bras. Zool. 21: 435-437. http://dx.doi.org/10.1590/S0101-81752004000300003 Simão S (1998). Tratado de fruticultura. FEALQ, Piracicaba. Sobierajski RR, Kageyama PY, Sebbenn AM, et al (2006). Sistema de reprodução em nove populações de Mimosa scabrella Bentham (Leguminosaceae). Sci. Forum 71: 37-49. Souza MS and Venturieri GA (1998). Floral phenology and breeding system of cacauhy (Theobroma speciosum Willd enow-Sterculiaceae). Projeto: Biologia aplicada a domesticação de fruteiras amazônicas do gênero Theobroma. In: Primeiro relatório, Belém. Souza MS and Venturieri GA (2009). Fenologia Floral e Sistema de Cruzamento do Cacauí (Theobroma speciosum). Available at [http//www.ccb.usfc.br/~giorgini/resumcong.htm]. Young A and Boyle T (2000). Forest fragmentation. In: Forest conservation genetics. Principles and practice (Young A, Boshier D and Boyle T, eds.). CSIRO, Collingwood and CABI, Oxford, 123-134. Zhang D, Martínez WJ, Johnson ES, et al (2012). Genetic diversity and spatial structure in a new distinct Theobroma cacao L. population in Bolivia. Genet. Resour. Crop Evol. 59: 239-252. http://dx.doi.org/10.1007/s10722-011-9680-y  
A. V. Tiago, Rossi, A. A. B., Tiago, P. V., Carpejani, A. A., Silva, B. M., Hoogerheide, E. S. S., Yamashita, O. M., Tiago, A. V., Rossi, A. A. B., Tiago, P. V., Carpejani, A. A., Silva, B. M., Hoogerheide, E. S. S., and Yamashita, O. M., Genetic diversity in cassava landraces grown on farms in Alta Floresta-MT, Brazil, vol. 15, p. -, 2016.
A. V. Tiago, Rossi, A. A. B., Tiago, P. V., Carpejani, A. A., Silva, B. M., Hoogerheide, E. S. S., Yamashita, O. M., Tiago, A. V., Rossi, A. A. B., Tiago, P. V., Carpejani, A. A., Silva, B. M., Hoogerheide, E. S. S., and Yamashita, O. M., Genetic diversity in cassava landraces grown on farms in Alta Floresta-MT, Brazil, vol. 15, p. -, 2016.