Publications

Found 3 results
Filters: Author is A.C. Faria-Campos  [Clear All Filters]
2011
L. C. Figueirêdo, Faria-Campos, A. C., Astolfi-Filho, S., and Azevedo, J. L., Identification and isolation of full-length cDNA sequences by sequencing and analysis of expressed sequence tags from guarana (Paullinia cupana), vol. 10, pp. 1188-1199, 2011.
Ângelo PCS, Nunes-Silva CG, Brígido MM, Azevedo JSN, et al. (2008). Guarana (Paullinia cupana var. sorbilis), an anciently consumed stimulant from the Amazon rain forest: the seeded-fruit transcriptome. Plant Cell Rep. 27: 117- 124. PMid:17917729 Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, et al. (2009). GenBank. Nucleic Acids Res. 37: D26-D31. doi:10.1093/nar/gkn723 PMid:18940867    PMCid:2686462 DeMarco R and Verjovski-Almeida S (2008). Expressed Sequence Tags (ESTs) and Gene Discovery: Schistosoma mansoni. In: Bioinformatics in Tropical Disease Research. Available at [http://ncbi.nlm.nih.gov/bookshelf/ br.fugi?book=bioinfo]. Accessed May 20, 2010. Edgar RC (2004). MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5: 113. doi:10.1186/1471-2105-5-113 PMid:15318951    PMCid:517706 Faria-Campos AC, Moratelli FS, Mendes IK, Ortolani PL, et al. (2006). Production of full-length cDNA sequences by sequencing and analysis of expressed sequence tags from Schistosoma mansoni. Mem. Inst. Oswaldo Cruz 101 (Suppl 1): 161-165. doi:10.1590/S0074-02762006000900026 Felsenstein J (2008). Phylip (Phylogeny Inference Package) Version 3.68. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle. Available at [http://evolution.genetics.washington.edu/phylip.html]. Accessed December 18, 2009. Freitas DV (2009). Caracterização Genética e Molecular do Guaranazeiro (Paullinia cupana “sorbilis”). Doctoral thesis, Universidade Federal do Amazonas, Manaus. Fuchs R (2002). From sequence to biology: the impact on bioinformatics. Bioinformatics 18: 505-506. doi:10.1093/bioinformatics/18.4.505 PMid:12016047 Galtier N, Gouy M and Gautier C (1996). SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny. Comput. Appl. Biosci. 12: 543-548. PMid:9021275 Gilchrist MJ, Zorn AM, Voigt J, Smith JC, et al. (2004). Defining a large set of full-length clones from a Xenopus tropicalis EST project. Dev. Biol. 271: 498-516. doi:10.1016/j.ydbio.2004.04.023 PMid:15223350 Guindon S and Gascuel O (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52: 696-704. doi:10.1080/10635150390235520 PMid:14530136 Ishida M, Kitao N, Mizuno K, Tanikawa N, et al. (2009). Occurrence of theobromine synthase genes in purine alkaloid-free species of Camellia plants. Planta 229: 559-568. doi:10.1007/s00425-008-0847-5 PMid:19018565 Lu G, Zhang S and Fang X (2008). An improved string composition method for sequence comparison BMC Bioinformatics 9 (Suppl 6): S15. doi:10.1186/1471-2105-9-S6-S15 PMid:18541050    PMCid:2423438 Luscombe NM, Greenbaum D and Gerstein M (2001). What is Bioinformatics? An Introduction and Overview. Yearbook of Medical Informatics, 83-99. Available at [http://www.ebi.ac.uk/luscombe/publications.html]. Accessed June 22, 2009. Malone G, Zimmer PD, Meneghello GE, Binneck E, et al. (2006). Gene prospection in cDNA libraries. Rev. Bras. Agrocienc. 12: 07-13. McCarthy AA and McCarthy JG (2007). The structure of two N-methyltransferases from the caffeine biosynthetic pathway. Plant Physiol. 144: 879-889. doi:10.1104/pp.106.094854 PMid:17434991    PMCid:1914188 Nanjo T, Sakurai T, Totoki Y, Toyoda A, et al. (2007). Functional annotation of 19,841 Populus nigra full-length enriched cDNA clones. BMC Genomics 8: 448. doi:10.1186/1471-2164-8-448 PMid:18053163    PMCid:2222646 Pôle Bioinformatique Lyonnais (PBIL) (2009). SeaView Version 4.0. Available at [http://pbil.univ-lyon1.fr/software/seaview.html]. Accessed August 10, 2009. Salzberg SL (2007). Genome re-annotation: a wiki solution? Genome Biol. 8: 102. PMid:17274839    PMCid:1839116 Uefuji H, Ogita S, Yamaguchi Y, Koizumi N, et al. (2003). Molecular cloning and functional characterization of three distinct N-methyltransferases involved in the caffeine biosynthetic pathway in coffee plants. Plant Physiol. 132: 372-380. doi:10.1104/pp.102.019679 PMid:12746542    PMCid:166982 Yoneyama N, Morimoto H, Ye CX, Ashihara H, et al. (2006). Substrate specificity of N-methyltransferase involved in purine alkaloids synthesis is dependent upon one amino acid residue of the enzyme. Mol. Genet. Genomics 275: 125-135. doi:10.1007/s00438-005-0070-z PMid:16333668