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“Identification and characterization of conserved microRNAs and their target genes in wheat (Triticum aestivum)”, vol. 9, pp. 1186-1196, 2010.
, Axtell MJ (2008). Evolution of microRNAs and their targets: are all microRNAs biologically relevant? Biochim. Biophys. Acta 1779: 725-734.
http://dx.doi.org/10.1016/j.bbagrm.2008.02.007
PMid:18342023
Axtell MJ and Bowman JL (2008). Evolution of plant microRNAs and their targets. Trends Plant Sci. 13: 343-349.
http://dx.doi.org/10.1016/j.tplants.2008.03.009
PMid:18502167
Axtell MJ, Snyder JA and Bartel DP (2007). Common functions for diverse small RNAs of land plants. Plant Cell 19: 1750-1769.
http://dx.doi.org/10.1105/tpc.107.051706
PMid:17601824 PMCid:1955733
Berezikov E, Cuppen E and Plasterk RH(2006). Approaches to microRNA discovery. Nat. Genet. 38 (Suppl): S2-S7.
http://dx.doi.org/10.1038/ng1794
PMid:16736019
Carrington JC and Ambros V (2003). Role of microRNAs in plant and animal development. Science 301: 336-338.
http://dx.doi.org/10.1126/science.1085242
PMid:12869753
Cui Q, Yu Z, Purisima EO and Wang E (2006). Principles of microRNA regulation of a human cellular signaling network. Mol. Syst. Biol. 2: 46.
http://dx.doi.org/10.1038/msb4100089
PMid:16969338 PMCid:1681519
Devor EJ, Peek AS, Lanier W and Samollow PB (2009). Marsupial-specific microRNAs evolved from marsupial-specific transposable elements. Gene 448: 187-191.
http://dx.doi.org/10.1016/j.gene.2009.06.019
PMid:19577616 PMCid:2788610
Dryanova A, Zakharov A and Gulick PJ (2008). Data mining for miRNAs and their targets in the Triticeae. Genome 51: 433-443.
http://dx.doi.org/10.1139/G08-025
PMid:18521122
Fahlgren N, Howell MD, Kasschau KD, Chapman EJ, et al. (2007). High-throughput sequencing of Arabidopsis microRNAs: evidence for frequent birth and death of MIRNA genes. PLoS. One 2: e219.
http://dx.doi.org/10.1371/journal.pone.0000219
PMid:17299599 PMCid:1790633
Han Y, Luan F, Zhu H, Shao Y, et al. (2009). Computational identification of microRNAs and their targets in wheat (Triticum aestivum L.). Sci. China C. Life Sci 52: 1091-1100.
http://dx.doi.org/10.1007/s11427-009-0144-y
PMid:19937208
Jiang D, Yin C, Yu A, Zhou X, et al. (2006). Duplication and expression analysis of multicopy miRNA gene family members in Arabidopsis and rice. Cell Res. 16: 507-518.
http://dx.doi.org/10.1038/sj.cr.7310062
PMid:16699546
Jin W, Li N, Zhang B, Wu F, et al. (2008). Identification and verification of microRNA in wheat (Triticum aestivum). J. Plant Res. 121: 351-355.
http://dx.doi.org/10.1007/s10265-007-0139-3
PMid:18357413
Jones-Rhoades MW, Bartel DP and Bartel B (2006). MicroRNAS and their regulatory roles in plants. Annu. Rev. Plant Biol. 57: 19-53.
http://dx.doi.org/10.1146/annurev.arplant.57.032905.105218
PMid:16669754
Lee RC, Feinbaum RL and Ambros V (1993). The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 75: 843-854.
http://dx.doi.org/10.1016/0092-8674(93)90529-Y
Lu S, Sun YH, Shi R, Clark C, et al. (2005). Novel and mechanical stress-responsive microRNAs in Populus trichocarpa that are absent from Arabidopsis. Plant Cell 17: 2186-2203.
http://dx.doi.org/10.1105/tpc.105.033456
PMid:15994906 PMCid:1182482
Maher C, Stein L and Ware D (2006). Evolution of Arabidopsis microRNA families through duplication events. Genome Res. 16: 510-519.
http://dx.doi.org/10.1101/gr.4680506
PMid:16520461 PMCid:1457037
Mlotshwa S, Yang Z, Kim Y and Chen X (2006). Floral patterning defects induced by Arabidopsis APETALA2 and microRNA172 expression in Nicotiana benthamiana. Plant Mol. Biol. 61: 781-793.
http://dx.doi.org/10.1007/s11103-006-0049-0
PMid:16897492 PMCid:3574581
Nasaruddin NM, Harikrishna K, Othman RY, Lim SH, et al. (2007). Computational prediction of microRNAs from Oil Palm (Elaeis guineensis Jacq.) expressed sequence tags. Asia Pac. J. Mol. Biol. Biotechnol. 15: 107-113.
Pan X, Zhang B, San Francisco M and Cobb GP (2007). Characterizing viral microRNAs and its application on identifying new microRNAs in viruses. J. Cell Physiol. 211: 10-18.
http://dx.doi.org/10.1002/jcp.20920
PMid:17167781
Schwab R, Palatnik JF, Riester M, Schommer C, et al. (2005). Specific effects of microRNAs on the plant transcriptome. Dev. Cell 8: 517-527.
http://dx.doi.org/10.1016/j.devcel.2005.01.018
PMid:15809034
Schwarz S, Grande AV, Bujdoso N, Saedler H, et al. (2008). The microRNA regulated SBP-box genes SPL9 and SPL15 control shoot maturation in Arabidopsis. Plant Mol. Biol. 67: 183-195.
http://dx.doi.org/10.1007/s11103-008-9310-z
PMid:18278578 PMCid:2295252
Sunkar R, Chinnusamy V, Zhu J and Zhu JK (2007). Small RNAs as big players in plant abiotic stress responses and nutrient deprivation. Trends Plant Sci. 12: 301-309.
http://dx.doi.org/10.1016/j.tplants.2007.05.001
PMid:17573231
Wei B, Cai T, Zhang R, Li A, et al. (2009). Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv. Funct. Integr. Genomics 9: 499- 511.
http://dx.doi.org/10.1007/s10142-009-0128-9
PMid:19499258
Willmann MR and Poethig RS (2007). Conservation and evolution of miRNA regulatory programs in plant development. Curr. Opin. Plant Biol. 10: 503-511.
http://dx.doi.org/10.1016/j.pbi.2007.07.004
PMid:17709279 PMCid:2080797
Yao Y, Guo G, Ni Z, Sunkar R, et al. (2007). Cloning and characterization of microRNAs from wheat (Triticum aestivum L.). Genome Biol. 8: R96.
http://dx.doi.org/10.1186/gb-2007-8-6-r96
PMid:17543110 PMCid:2394755
Yin Z, Li C, Han X and Shen F (2008). Identification of conserved microRNAs and their target genes in tomato (Lycopersicon esculentum). Gene 414: 60-66.
http://dx.doi.org/10.1016/j.gene.2008.02.007
PMid:18387754
Zhang BH, Pan XP, Wang QL, Cobb GP, et al. (2005). Identification and characterization of new plant microRNAs using EST analysis. Cell Res. 15: 336-360.
http://dx.doi.org/10.1038/sj.cr.7290302
PMid:15916721
Zhang B, Pan X, Wang Q, Cobb GP, et al. (2006a). Computational identification of microRNAs and their targets. Comput. Biol. Chem. 30: 395-407.
http://dx.doi.org/10.1016/j.compbiolchem.2006.08.006
PMid:17123865
Zhang BH, Pan XP, Cox SB, Cobb GP, et al. (2006b). Evidence that miRNAs are different from other RNAs. Cell Mol. Life Sci. 63: 246-254.
http://dx.doi.org/10.1007/s00018-005-5467-7
PMid:16395542
Zhang B, Wang Q, Wang K, Pan X, et al. (2007). Identification of cotton microRNAs and their targets. Gene 397: 26-37.
http://dx.doi.org/10.1016/j.gene.2007.03.020
PMid:17574351