Publications
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“Gene expression of coffee seed oxidation and germination processes during drying”, vol. 12, pp. 6968-6982, 2013.
, “Expression analysis of transcription factors from the interaction between cacao and Moniliophthora perniciosa (Tricholomataceae)”, vol. 9, pp. 1279-1297, 2010.
, Andebrhan T, Figueira A, Yamada MM, Cascardo J, et al. (1999). Molecular fingerprinting suggests two primary outbreaks of witches' broom disease (Crinipellis perniciosa) of Theobroma cacao in Bahia, Brazil. Eur. J. Plant Pathol. 105: 167-175.
http://dx.doi.org/10.1023/A:1008716000479
Bailey BA, Bae H, Strem MD, Antunez de MG, et al. (2005a). Developmental expression of stress response genes in Theobroma cacao leaves and their response to Nep1 treatment and a compatible infection by Phytophthora megakarya. Plant Physiol. Biochem. 43: 611-622.
http://dx.doi.org/10.1016/j.plaphy.2005.04.006
PMid:15979314
Bailey BA, Strema MD, Bae H, Mayolo GA, et al. (2005b). Gene expression in leaves of Theobroma cacao in response to mechanical wounding, ethylene, and/or methyl jasmonate. Plant Sci. 168: 1247-1258.
http://dx.doi.org/10.1016/j.plantsci.2005.01.002
Borrone JW, Kuhn DN and Schnell RJ (2004). Isolation, characterization, and development of WRKY genes as useful genetic markers in Theobroma cacao. Theor. Appl. Genet. 109: 495-507.
http://dx.doi.org/10.1007/s00122-004-1662-4
PMid:15148571
Brown JS, Phillips-Mora W, Power EJ, Krol C, et al. (2007). Mapping QTLs for resistance to frosty pod and black pod diseases and horticultural traits in Theobroma cacao L. Crop Sci. 47: 1851-1858.
http://dx.doi.org/10.2135/cropsci2006.11.0753
Ceita GO, Macêdo JNA, Santos TB, Alemanno L, et al. (2007). Involvement of calcium oxalate degradation during programmed cell death in Theobroma cacao tissues triggered by the hemibiotrophic fungus Moniliophthora perniciosa. Plant Sci. 173: 106-117.
http://dx.doi.org/10.1016/j.plantsci.2007.04.006
Century K, Reuber TL and Ratcliffe OJ (2008). Regulating the regulators: the future prospects for transcription-factor-based agricultural biotechnology products. Plant Physiol. 147: 20-29.
http://dx.doi.org/10.1104/pp.108.117887
PMid:18443103 PMCid:2330319
Dong J, Chen C and Chen Z (2003). Expression profiles of the Arabidopsis WRKY gene superfamily during plant defense response. Plant Mol. Biol. 51: 21-37.
http://dx.doi.org/10.1023/A:1020780022549
PMid:12602888
Eisen MB, Spellman PT, Brown PO and Botstein D (1998). Cluster analysis and display of genome-wide expression patterns. Proc. Natl. Acad. Sci U. S. A. 95: 14863-14868.
http://dx.doi.org/10.1073/pnas.95.25.14863
PMid:9843981 PMCid:24541
Eulgem T (2005). Regulation of the Arabidopsis defense transcriptome. Trends Plant Sci. 10: 71-78.
http://dx.doi.org/10.1016/j.tplants.2004.12.006
PMid:15708344
Eulgem T and Somssich IE (2007). Networks of WRKY transcription factors in defense signaling. Curr. Opin. Plant Biol. 10: 366-371.
http://dx.doi.org/10.1016/j.pbi.2007.04.020
PMid:17644023
Frias GA, Purdy LH and Schmidt RA (1995). An inoculation method for evaluating resistance of cacao to Crinipellis perniciosa. Plant Dis. 79: 787-791.
http://dx.doi.org/10.1094/PD-79-0787
Ganesh D, Petitot A-S, Silva MC, Alary R, et al. (2006). Monitoring of the early molecular resistance responses of coffee (Coffea arabica L.) to the rust fungus (Hemileia vastatrix) using real-time quantitative RT-PCR. Plant Sci. 170: 1045-1051.
http://dx.doi.org/10.1016/j.plantsci.2005.12.009
Gesteira AS, Micheli F, Ferreira CF and Cascardo JC (2003). Isolation and purification of functional total RNA from different organs of cacao tree during its interaction with the pathogen Crinipellis perniciosa. Biotechniques 35: 494-500.
Gesteira AS, Micheli F, Carels N, Da Silva AC, et al. (2007). Comparative analysis of expressed genes from cacao meristems infected by Moniliophthora perniciosa. Ann. Bot. 100: 129-140.
http://dx.doi.org/10.1093/aob/mcm092
PMid:17557832 PMCid:2735303
Gurr SJ and Rushton PJ (2005a). Engineering plants with increased disease resistance: what are we going to express? Trends Biotechnol. 23: 275-282.
http://dx.doi.org/10.1016/j.tibtech.2005.04.007
PMid:15922079
Gurr SJ and Rushton PJ (2005b). Engineering plants with increased disease resistance: how are we going to express it? Trends Biotechnol. 23: 283-290.
http://dx.doi.org/10.1016/j.tibtech.2005.04.009
PMid:15922080
Jalali BL, Bhargava S and Kamble A (2006). Signal transduction and transcriptional regulation of plant defense responses. J. Phytopathol. 154: 65-74.
http://dx.doi.org/10.1111/j.1439-0434.2006.01073.x
Journot-Catalino N, Somssich IE, Roby D and Kroj T (2006). The transcription factors WRKY11 and WRKY17 act as negative regulators of basal resistance in Arabidopsis thaliana. Plant Cell 18: 3289-3302.
http://dx.doi.org/10.1105/tpc.106.044149
PMid:17114354 PMCid:1693958
Kaminaka H, Nake C, Epple P, Dittgen J, et al. (2006). bZIP10-LSD1 antagonism modulates basal defense and cell death in Arabidopsis following infection. EMBO J. 25: 4400-4411.
http://dx.doi.org/10.1038/sj.emboj.7601312
PMid:16957775 PMCid:1570446
Laquitaine L, Gomes E, Francois J, Marchive C, et al. (2006). Molecular basis of ergosterol-induced protection of grape against Botrytis cinerea: induction of type I LTP promoter activity, WRKY, and stilbene synthase gene expression. Mol. Plant Microbe Interact. 19: 1103-1112.
http://dx.doi.org/10.1094/MPMI-19-1103
PMid:17022174
Leal GA, Albuquerque PSB and Figueira A (2007). Genes differentially expressed in Theobroma cacao associated with resistance to witches' broom disease caused by Crinipellis perniciosa. Mol. Plant Pathol. 8: 279-292.
http://dx.doi.org/10.1111/j.1364-3703.2007.00393.x
PMid:20507499
Li G, Osborne J and Asiegbu FO (2006). A macroarray expression analysis of novel cDNAs vital for growth initiation and primary metabolism during development of Heterobasidion parviporum conidiospores. Environ. Microbiol. 8: 1340-1350.
http://dx.doi.org/10.1111/j.1462-2920.2006.01027.x
PMid:16872398
Liu Y, Schiff M and Dinesh-Kumar SP (2004). Involvement of MEK1 MAPKK, NTF6 MAPK, WRKY/MYB transcription factors, COI1 and CTR1 in N-mediated resistance to tobacco mosaic virus. Plant J. 38: 800-809.
http://dx.doi.org/10.1111/j.1365-313X.2004.02085.x
PMid:15144381
Lopez F, Rougemont J, Loriod B, Bourgeois A, et al. (2004). Feature extraction and signal processing for nylon DNA microarrays. BMC Genomics 5: 38.
http://dx.doi.org/10.1186/1471-2164-5-38
PMid:15222896 PMCid:471548
Marchive C, Mzid R, Deluc L, Barrieu F, et al. (2007). Isolation and characterization of a Vitis vinifera transcription factor, VvWRKY1, and its effect on responses to fungal pathogens in transgenic tobacco plants. J. Exp. Bot. 58: 1999-2010.
http://dx.doi.org/10.1093/jxb/erm062
PMid:17456504
Mellway RD, Tran LT, Prouse MB, Campbell MM, et al. (2009). The wound-, pathogen-, and ultraviolet B-responsive MYB134 gene encodes an R2R3 MYB transcription factor that regulates proanthocyanidin synthesis in poplar. Plant Physiol. 150: 924-941.
http://dx.doi.org/10.1104/pp.109.139071
PMCid:2689947
Mzid R, Marchive C, Blancard D, Deluc L, et al. (2007). Overexpression of VvWRKY2 in tobacco enhances broad resistance to necrotrophic fungal pathogens. Physiol. Plant 131: 434-447.
http://dx.doi.org/10.1111/j.1399-3054.2007.00975.x
PMid:18251882
Pandey SP and Somssich IE (2009). The role of WRKY transcription factors in plant immunity. Plant Physiol. 150: 1648- 1655.
http://dx.doi.org/10.1104/pp.109.138990
PMid:19420325 PMCid:2719123
Purdy LH and Schmidt RA (1996). Status of cacao witches' broom: biology, epidemiology, and management. Annu. Rev. Phytopathol. 34: 573-594.
http://dx.doi.org/10.1146/annurev.phyto.34.1.573
PMid:15012557
Raffaele S, Rivas S and Roby D (2006). An essential role for salicylic acid in AtMYB30-mediated control of the hypersensitive cell death program in Arabidopsis. FEBS Lett. 580: 3498-3504.
http://dx.doi.org/10.1016/j.febslet.2006.05.027
PMid:16730712
Rodrigues SM, Soares VL, de Oliveira TM, Gesteira AS, et al. (2007). Isolation and purification of RNA from tissues rich in polyphenols, polysaccharides, and pigments of annatto (Bixa orellana L.). Mol. Biotechnol. 37: 220-224.
http://dx.doi.org/10.1007/s12033-007-0070-9
PMid:17952668
Sarowar S, Oh HW, Cho HS, Baek KH, et al. (2007). Capsicum annuum CCR4-associated factor CaCAF1 is necessary for plant development and defence response. Plant J. 51: 792-802.
http://dx.doi.org/10.1111/j.1365-313X.2007.03174.x
PMid:17587232
Schnell RJ, Kuhn DN, Brown JS, Olano CT, et al. (2007). Development of a marker assisted selection program for cacao. Phytopathology 97: 1664-1669.
http://dx.doi.org/10.1094/PHYTO-97-12-1664
PMid:18943731
Silva SDVM, Luz EDMN, Almeida OC, Gramacho K, et al. (2002). Redescrição da sintomatologia causada por Crinipellis perniciosa em cacaueiros. Agrotropica 14: 1-24.
Terrier N, Torregrosa L, Ageorges A, Vialet S, et al. (2009). Ectopic expression of VvMybPA2 promotes proanthocyanidin biosynthesis in grapevine and suggests additional targets in the pathway. Plant Physiol. 149: 1028-1041.
http://dx.doi.org/10.1104/pp.108.131862
PMid:19098092 PMCid:2633825
Thurow C, Schiermeyer A, Krawczyk S, Butterbrodt T, et al. (2005). Tobacco bZIP transcription factor TGA2.2 and related factor TGA2.1 have distinct roles in plant defense responses and plant development. Plant J. 44: 100-113.
http://dx.doi.org/10.1111/j.1365-313X.2005.02513.x
PMid:16167899
Wang E (2005). RNA amplification for successful gene profiling analysis. J. Transl. Med. 3: 28.
http://dx.doi.org/10.1186/1479-5876-3-28
PMid:16042807 PMCid:1201175
Yang B, Jiang Y, Rahman MH, Deyholos MK, et al. (2009). Identification and expression analysis of WRKY transcription factor genes in canola (Brassica napus L.) in response to fungal pathogens and hormone treatments. BMC Plant Biol. 9: 68.
http://dx.doi.org/10.1186/1471-2229-9-68
PMid:19493335 PMCid:2698848
Yang YH, Dudoit S, Luu P, Lin DM, et al. (2002). Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res. 30: e15.
http://dx.doi.org/10.1093/nar/30.4.e15
PMid:11842121 PMCid:100354