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2010
R. Stolf-Moreira, Medri, M. E., Neumaier, N., Lemos, N. G., Brogin, R. L., Marcelino, F. C., de Oliveira, M. C. N., Farias, J. R. B., Abdelnoor, R. V., and Nepomuceno, A. L., Cloning and quantitative expression analysis of drought-induced genes in soybean, vol. 9, pp. 858-867, 2010.
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Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway. Plant Cell 14: 1675-1690. http://dx.doi.org/10.1105/tpc.003483 PMid:12172015 PMCid:151458   Gilmour SJ, Zarka DG, Stockinger EJ, Salazar MP, et al. (1998). Low temperature regulation of the Arabidopsis CBF family of AP2 transcriptional activators as an early step in cold-induced COR gene expression. Plant J. 16: 433-442. http://dx.doi.org/10.1046/j.1365-313x.1998.00310.x PMid:9881163   Haake V, Cook D, Riechmann JL, Pineda O, et al. (2002). Transcription factor CBF4 is a regulator of drought adaptation in Arabidopsis. Plant Physiol. 130: 639-648. http://dx.doi.org/10.1104/pp.006478 PMid:12376631 PMCid:166593   Haritatos E, Medville R and Turgeon R (2000). Minor vein structure and sugar transport in Arabidopsis thaliana. Planta 211: 105-111. http://dx.doi.org/10.1007/s004250000268 PMid:10923710   Johansson I, Karlsson M, Johanson U, Larsson C, et al. (2000). The role of aquaporins in cellular and whole plant water balance. Biochim. Biophys. Acta 1465: 324-342. http://dx.doi.org/10.1016/S0005-2736(00)00147-4   Kaldenhoff R, Grote K, Zhu JJ and Zimmermann U (1998). Significance of plasmalemma aquaporins for water-transport in Arabidopsis thaliana. Plant J. 14: 121-128. http://dx.doi.org/10.1046/j.1365-313X.1998.00111.x PMid:9681029   Kasuga M, Liu Q, Miura S, Yamaguchi-Shinozaki K, et al. (1999). Improving plant drought, salt, and freezing tolerance by gene transfer of a single stress-inducible transcription factor. Nat. Biotechnol. 17: 287-291. http://dx.doi.org/10.1038/7036 PMid:10096298   Kasuga M, Miura S, Shinozaki K and Yamaguchi-Shinozaki K (2004). A combination of the Arabidopsis DREB1A gene and stress-inducible rd29A promoter improved drought- and low-temperature stress tolerance in tobacco by gene transfer. Plant Cell Physiol. 45: 346-350. http://dx.doi.org/10.1093/pcp/pch037 PMid:15047884   Kizis D, Lumbreras V and Pages M (2001). Role of AP2/EREBP transcription factors in gene regulation during abiotic stress. FEBS Lett. 498: 187-189. http://dx.doi.org/10.1016/S0014-5793(01)02460-7   Kumar S, Tamura K and Nei M (2004). MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform. 5: 150-163. http://dx.doi.org/10.1093/bib/5.2.150 PMid:15260895   Liu JJ, Krenz DC, Galvez AF and de Lumen BO (1998). Galactinol synthase (GS): increased enzyme activity and levels of mRNA due to cold and desiccation. Plant Sci. 134: 11-20. http://dx.doi.org/10.1016/S0168-9452(98)00042-9   Maitra N and Cushman JC (1998). Characterization of a drought-induced soybean cDNA encoding a plant defensin. Plant Physiol. 118: 1536.   Martre P, Morillon R, Barrieu F, North GB, et al. (2002). Plasma membrane aquaporins play a significant role during recovery from water deficit. Plant Physiol. 130: 2101-2110. http://dx.doi.org/10.1104/pp.009019 PMid:12481094 PMCid:166722   Maurel C and Chrispeels MJ (2001). Aquaporins. A molecular entry into plant water relations. Plant Physiol. 125: 135-138. http://dx.doi.org/10.1104/pp.125.1.135 PMid:11154316 PMCid:1539345   Miller EM and Nickoloff JA (1995). Escherichia coli Electrotransformation. In: Electroporation Protocols for Microorganisms (Nickoloff JA, ed.). Humana Press, Totowa, 105-114. http://dx.doi.org/10.1385/0-89603-310-4:105 PMid:7550724   Pfaffl MW, Horgan GW and Dempfle L (2002). Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res. 30: e36. http://dx.doi.org/10.1093/nar/30.9.e36 PMid:11972351 PMCid:113859   Schenk PM, Kazan K, Manners JM, Anderson JP, et al. (2003). Systemic gene expression in Arabidopsis during an incompatible interaction with Alternaria brassicicola. Plant Physiol. 132: 999-1010. http://dx.doi.org/10.1104/pp.103.021683 PMid:12805628 PMCid:167038   Seki M, Narusaka M, Abe H, Kasuga M, et al. (2001). Monitoring the expression pattern of 1300 Arabidopsis genes under drought and cold stresses by using a full-length cDNA microarray. Plant Cell 13: 61-72. PMid:11158529 PMCid:102214   Shinozaki K and Yamaguchi-Shinozaki K (1996). Molecular responses to drought and cold stress. Curr. Opin. Biotechnol. 7: 161-167. http://dx.doi.org/10.1016/S0958-1669(96)80007-3   Shinozaki K and Yamaguchi-Shinozaki K (2000). Molecular responses to dehydration and low temperature: differences and cross-talk between two stress signaling pathways. Curr. Opin. Plant Biol. 3: 217-223. PMid:10837265   Shinozaki K and Yamaguchi-Shinozaki K (2007). Gene networks involved in drought stress response and tolerance. J. Exp. Bot. 58: 221-227. http://dx.doi.org/10.1093/jxb/erl164 PMid:17075077   Shukla VK and Chrispeels MJ (1998). Aquaporins their Role and Regulation in Cellular Water Movement. In: Cellular Integrations of Signalling Pathways in Plant Development. (Lo Schiavo E, Lat KL, Morelli G and Raikhel NV, eds.). Series Vol. H 104. North Atlantic Treaty Organization Advanced Study Institute. Springer-Verlag, Berlin, 11-21.   Siefritz F, Biela A, Eckert M, Otto B, et al. (2001). The tobacco plasma membrane aquaporin NtAQP1. J. Exp. Bot. 52: 1953-1957. http://dx.doi.org/10.1093/jexbot/52.363.1953 PMid:11559730   Stolf R (2007). Identificação e Análise da Expressão de Genes Relacionados com Tolerância à Seca em Soja Através de Microarranjos de DNA e PCR em Tempo Real. Doctoral thesis, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal.   Tyerman SD, Bohnert HJ, Maurel C, Steudle E, et al. (1999). Plant aquaporins: their molecular biology, biophysics, and significance for plant water relations. J. Exp. Bot. 50: 1055-1071.   Volkov RA, Panchuk II and Schoffl F (2003). Heat-stress-dependency and developmental modulation of gene expression: the potential of house-keeping genes as internal standards in mRNA expression profiling using real-time RT-PCR. J. Exp. Bot. 54: 2343-2349. http://dx.doi.org/10.1093/jxb/erg244 PMid:14504302   Yamada S, Komori T and Imaseki H (1997). cDNA cloning of gamma-thionin from Nicotiana excelsior. Plant Physiol. 115: 314.   Yamaguchi-Shinozaki K and Shinozaki K (1994). A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress. Plant Cell 6: 251-264. PMid:8148648 PMCid:160431   Zhang JZ, Creelman RA and Zhu JK (2004). From laboratory to field. Using information from Arabidopsis to engineer salt, cold, and drought tolerance in crops. Plant Physiol. 135: 615-621. http://dx.doi.org/10.1104/pp.104.040295 PMid:15173567 PMCid:514097
R. Stolf-Moreira, Medri, M. E., Neumaier, N., Lemos, N. G., Pimenta, J. A., Tobita, S., Brogin, R. L., Marcelino-Guimarães, F. C., Oliveira, M. C. N., Farias, J. R. B., Abdelnoor, R. V., and Nepomuceno, A. L., Soybean physiology and gene expression during drought, vol. 9, pp. 1946-1956, 2010.
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Expression of a GALACTINOL SYNTHASE gene in tomato seeds is up-regulated before maturation desiccation and again after imbibition whenever radicle protrusion is prevented. Plant Physiol. 131: 1347-1359. http://dx.doi.org/10.1104/pp.016386 PMid:12644684 PMCid:166894   Hannah MA, Wiese D, Freund S, Fiehn O, et al. (2006). Natural genetic variation of freezing tolerance in Arabidopsis. Plant Physiol. 142: 98-112. http://dx.doi.org/10.1104/pp.106.081141 PMid:16844837 PMCid:1557609   Hewitt EJ (1963). Mineral Nutrition of Plants in Culture Media. In: Plant Physiology. Vol. III (Steward FC, ed.). Academic Press, New York, 97-133.   Hill AE, Shachar-Hill B and Shachar-Hill Y (2004). What are aquaporins for? J. Membr. Biol. 197: 1-32. http://dx.doi.org/10.1007/s00232-003-0639-6 PMid:15014915   Huang B and Fry JD (1998). Root anatomical, physiological, and morphological responses to drought stress for tall fescue cultivars. Crop Sci. 38: 1017-1022. http://dx.doi.org/10.2135/cropsci1998.0011183X003800040022x   Iuchi S, Kobayashi M, Yamaguchi-Shinozaki K and Shinozaki K (2000). A stress-inducible gene for 9-cis-epoxycarotenoid dioxygenase involved in abscisic acid biosynthesis under water stress in drought-tolerant cowpea. Plant Physiol. 123: 553-562. http://dx.doi.org/10.1104/pp.123.2.553 PMid:10859185 PMCid:59023   Jones HG (2007). Monitoring plant and soil water status: established and novel methods revisited and their relevance to studies of drought tolerance. J. Exp. Bot. 58: 119-130. http://dx.doi.org/10.1093/jxb/erl118 PMid:16980592   Kron AP, Souza GMR and Ribeiro RV (2008). Water deficiency at different developmental stages of Glycine max can improve drought tolerance. Bragantia 67: 43-49. http://dx.doi.org/10.1590/S0006-87052008000100005   Li XP, Tian AG, Luo GZ, Gong ZZ, et al. (2005). Soybean DRE-binding transcription factors that are responsive to abiotic stresses. Theor. Appl. Genet. 110: 1355-1362. http://dx.doi.org/10.1007/s00122-004-1867-6 PMid:15841365   Machado-Filho JA, Campostrini E, Yamanishi OK and Fagundes GR (2006). Seasonal variation of leaf gas exchange in papaya plants grown under field condition. Bragantia 65: 185-196.   Maitra N and Cushman JC (1998). Characterization of a drought-induced soybean cDNA encoding a plant defensin. Plant Physiol. 118: 1536.   Maruyama K, Sakuma Y, Kasuga M, Ito Y, et al. (2004). Identification of cold-inducible downstream genes of the Arabidopsis DREB1A/CBF3 transcriptional factor using two microarray systems. Plant J. 38: 982-993. http://dx.doi.org/10.1111/j.1365-313X.2004.02100.x PMid:15165189   Maurel C and Chrispeels MJ (2001). Aquaporins. A molecular entry into plant water relations. Plant Physiol. 125: 135-138. http://dx.doi.org/10.1104/pp.125.1.135 PMid:11154316 PMCid:1539345   Monti A, Brugnoli E, Scartazza A and Amaducci MT (2006). The effect of transient and continuous drought on yield, photosynthesis and carbon isotope discrimination in sugar beet (Beta vulgaris L.). J. Exp. Bot. 57: 1253-1262. http://dx.doi.org/10.1093/jxb/erj091 PMid:16467409   Oya T, Nepomuceno AL, Neumaier N, Farias JRB, et al. (2004). Drought tolerance characteristics of Brazilian soybean cultivars - evaluation and characterization of drought tolerance of various Brazilian soybean cultivars in the field. Plant Prod. Sci. 7: 129-137. http://dx.doi.org/10.1626/pps.7.129   Panikulangara TJ, Eggers-Schumacher G, Wunderlich M, Stransky H, et al. (2004). Galactinol synthase1. A novel heat shock factor target gene responsible for heat-induced synthesis of raffinose family oligosaccharides in Arabidopsis. Plant Physiol. 136: 3148-3158. http://dx.doi.org/10.1104/pp.104.042606 PMid:15466240 PMCid:523375   Pfaffl MW, Horgan GW and Dempfle L (2002). Relative expression software tool (REST) for group-wise comparison and statistical analysis of relative expression results in real-time PCR. Nucleic Acids Res. 30: e36. http://dx.doi.org/10.1093/nar/30.9.e36 PMid:11972351 PMCid:113859   Porcel R, Aroca R, Azcon R and Ruiz-Lozano JM (2006). PIP aquaporin gene expression in arbuscular mycorrhizal Glycine max and Lactuca sativa plants in relation to drought stress tolerance. Plant Mol. Biol. 60: 389-404. http://dx.doi.org/10.1007/s11103-005-4210-y PMid:16514562   Schafleitner R, Gaudin A, Rosales ROG, Aliaga CAA, et al. (2007). Proline accumulation and real time PCR expression analysis of genes encoding enzymes of proline metabolism in relation to drought tolerance in Andean potato. Acta Physiol. Plant. 29: 19-26. http://dx.doi.org/10.1007/s11738-006-0003-4   Shen YG, Zhang WK, Yan DQ, Du BX, et al. (2003). Characterization of a DRE-binding transcription factor from a halophyte Atriplex hortensis. Theor. Appl. Genet. 107: 155-161. PMid:12677404   Schenk PM, Kazan K, Manners JM, Anderson JP, et al. (2003). Systemic gene expression in Arabidopsis during an incompatible interaction with Alternaria brassicicola. Plant Physiol. 132: 999-1010. http://dx.doi.org/10.1104/pp.103.021683 PMid:12805628 PMCid:167038   Shinozaki K and Yamaguchi-Shinozaki K (2007). Gene networks involved in drought stress response and tolerance. J. Exp. Bot. 58: 221-227. http://dx.doi.org/10.1093/jxb/erl164 PMid:17075077   Singh K, Foley RC and Onate-Sanchez L (2002). Transcription factors in plant defense and stress responses. Curr. Opin. Plant Biol. 5: 430-436. http://dx.doi.org/10.1016/S1369-5266(02)00289-3   Stolf R (2007). Identificação e Análise da Expressão de Genes Relacionados com Tolerância à Seca em Soja Através de Microarranjos de DNA e PCR em Tempo Real. Doctoral thesis, Universidade Estadual Paulista Júlio de Mesquita Filho, Jaboticabal.   Sung DY, Vierling E and Guy CL (2001). Comprehensive expression profile analysis of the Arabidopsis Hsp70 gene family. Plant Physiol. 126: 789-800. http://dx.doi.org/10.1104/pp.126.2.789 PMid:11402207 PMCid:111169   Taji T, Seki M, Satou M, Sakurai T, et al. (2004). Comparative genomics in salt tolerance between Arabidopsis and Arabidopsis-related halophyte salt cress using Arabidopsis microarray. Plant Physiol. 135: 1697-1709. http://dx.doi.org/10.1104/pp.104.039909 PMid:15247402 PMCid:519083   Tang M, Sun J, Liu Y, Chen F, et al. (2007). Isolation and functional characterization of the JcERF gene, a putative AP2/ EREBP domain-containing transcription factor, in the woody oil plant Jatropha curcas. Plant Mol. Biol. 63: 419-428. http://dx.doi.org/10.1007/s11103-006-9098-7 PMid:17103014   Vasquez-Robinet C, Mane SP, Ulanov AV, Watkinson JI, et al. (2008). Physiological and molecular adaptations to drought in Andean potato genotypes. J. Exp. Bot. 59: 2109-2123. http://dx.doi.org/10.1093/jxb/ern073 PMid:18535297 PMCid:2413284   Warren CR (2004). The photosynthetic limitation posed by internal conductance to CO2 movement is increased by nutrient supply. J. Exp. Bot. 55: 2313-2321. http://dx.doi.org/10.1093/jxb/erh239 PMid:15310814   Yamada K, Lim J, Dale JM, Chen H, et al. (2003). Empirical analysis of transcriptional activity in the Arabidopsis genome. Science 302: 842-846. http://dx.doi.org/10.1126/science.1088305 PMid:14593172   Yamaguchi-Shinozaki K and Shinozaki K (2005). Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters. Trends Plant Sci 10: 88-94. http://dx.doi.org/10.1016/j.tplants.2004.12.012 PMid:15708346