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2013
M. P. C. Telles, Silva, J. B., Resende, L. V., Vianello, R. P., Chaves, L. J., Soares, T. N., and Collevatti, R. G., Development and characterization of new microsatellites for Eugenia dysenterica DC (Myrtaceae), vol. 12, pp. 3124-3127, 2013.
Andreev DE, Dmitriev SE, Zinovkin R, Terenin IM, et al. (2012). The 5' untranslated region of Apaf-1 mRNA directs translation under apoptosis conditions via a 5' end-dependent scanning mechanism. FEBS Lett. 586: 4139-4143. http://dx.doi.org/10.1016/j.febslet.2012.10.010 PMid:23085065   Burbee DG, Forgacs E, Zochbauer-Muller S, Shivakumar L, et al. (2001). Epigenetic inactivation of RASSF1A in lung and breast cancers and malignant phenotype suppression. J. Natl. Cancer Inst. 93: 691-699. http://dx.doi.org/10.1093/jnci/93.9.691 PMid:11333291   Christoph F, Kempkensteffen C, Weikert S, Kollermann J, et al. (2006). Methylation of tumour suppressor genes APAF-1 and DAPK-1 and in vitro effects of demethylating agents in bladder and kidney cancer. Br. J. Cancer 95: 1701-1707. http://dx.doi.org/10.1038/sj.bjc.6603482 PMid:17133271 PMCid:2360762   Chu SH, Ma YB, Feng DF, Zhang H, et al. (2012). Effect of 5-Aza-2'-deoxycytidine on SLC22A18 in glioma U251 cells. Mol. Med. Report. 5: 138-141.   Dammann R, Takahashi T and Pfeifer GP (2001). The CpG island of the novel tumor suppressor gene RASSF1A is intensely methylated in primary small cell lung carcinomas. Oncogene 20: 3563-3567. http://dx.doi.org/10.1038/sj.onc.1204469 PMid:11429703   Dreijerink K, Braga E, Kuzmin I, Geil L, et al. (2001). The candidate tumor suppressor gene, RASSF1A, from human chromosome 3p21.3 is involved in kidney tumorigenesis. Proc. Natl. Acad. Sci. U. S. A. 98: 7504-7509. http://dx.doi.org/10.1073/pnas.131216298 PMid:11390984 PMCid:34698   Ferguson AT, Vertino PM, Spitzner JR, Baylin SB, et al. (1997). Role of estrogen receptor gene demethylation and DNA methyltransferase.DNA adduct formation in 5-aza-2'deoxycytidine-induced cytotoxicity in human breast cancer cells. J. Biol. Chem. 272: 32260-32266. http://dx.doi.org/10.1074/jbc.272.51.32260 PMid:9405430   Hassler MR, Klisaroska A, Kollmann K, Steiner I, et al. (2012). Antineoplastic activity of the DNA methyltransferase inhibitor 5-aza-2'-deoxycytidine in anaplastic large cell lymphoma. Biochimie 94: 2297-2307. http://dx.doi.org/10.1016/j.biochi.2012.05.029 PMid:22687603 PMCid:3480637   Kuzmin I, Gillespie JW, Protopopov A, Geil L, et al. (2002). The RASSF1A tumor suppressor gene is inactivated in prostate tumors and suppresses growth of prostate carcinoma cells. Cancer Res. 62: 3498-3502. PMid:12067994   Kuzmin I, Liu L, Dammann R, Geil L, et al. (2003). Inactivation of RAS association domain family 1A gene in cervical carcinomas and the role of human papillomavirus infection. Cancer Res. 63: 1888-1893. PMid:12702579   Kwong J, Lo KW, To KF, Teo PML, et al. (2002). Promoter hypermethylation of multiple genes in nasopharyngeal carcinoma. Clin. Cancer Res. 8: 131-137. PMid:11801549   Lee MG, Kim HY, Byun DS, Lee SJ, et al. (2001). Frequent epigenetic inactivation of RASSF1A in human bladder carcinoma. Cancer Res. 61: 6688-6692. PMid:11559536   Liu L, Yoon JH, Dammann R and Pfeifer GP (2002). Frequent hypermethylation of the RASSF1A gene in prostate cancer. Oncogene 21: 6835-6840. http://dx.doi.org/10.1038/sj.onc.1205814 PMid:12360410   Melzer IM, Fernandez SB, Bosser S, Lohrig K, et al. (2012). The Apaf-1-binding protein Aven is cleaved by Cathepsin D to unleash its anti-apoptotic potential. Cell Death. Differ. 19: 1435-1445. http://dx.doi.org/10.1038/cdd.2012.17 PMid:22388353   Menschikowski M, Platzbecker U, Hagelgans A, Vogel M, et al. (2012). Aberrant methylation of the M-type phospholipase A2 receptor gene in leukemic cells. BMC Cancer 12: 576. http://dx.doi.org/10.1186/1471-2407-12-576 PMid:23217014 PMCid:3561142   Montenegro MF, Saez-Ayala M, Pinero-Madrona A, Cabezas-Herrera J, et al. (2012). Reactivation of the Tumour Suppressor RASSF1A in Breast Cancer by Simultaneous Targeting of DNA and E2F1 Methylation. PLoS One 7: e52231. http://dx.doi.org/10.1371/journal.pone.0052231 PMid:23251702 PMCid:3522638   Niimi S, Arakawa-Takeuchi S, Uranbileg B, Park JH, et al. (2012). Cdc6 protein obstructs apoptosome assembly and consequent cell death by forming stable complexes with activated Apaf-1 molecules. J. Biol. Chem. 287: 18573-18583. http://dx.doi.org/10.1074/jbc.M112.347690 PMid:22493447   Ozdemir F, Altinisik J, Karateke A, Coksuer H, et al. (2012). Methylation of tumor suppressor genes in ovarian cancer. Exp. Ther. Med. 4: 1092-1096. PMid:23226780 PMCid:3494110   Sankaranarayanan R and Ferlay J (2006). Worldwide burden of gynaecological cancer: the size of the problem. Best. Pract. Res. Clin. Obstet. Gynaecol. 20: 207-225. http://dx.doi.org/10.1016/j.bpobgyn.2005.10.007 PMid:16359925   Vos MD, Ellis CA, Bell A, Birrer MJ, et al. (2000). Ras uses the novel tumor suppressor RASSF1 as an effector to mediate apoptosis. J. Biol. Chem. 275: 35669-35672. http://dx.doi.org/10.1074/jbc.C000463200 PMid:10998413   Wu Y, Meng L, Wang H, Xu Q, et al. (2006). Regulation of DNA methylation on the expression of the FHIT gene contributes to cervical carcinoma cell tumorigenesis. Oncol. Rep. 16: 625-629. PMid:16865265
P. C. B. Cardoso, Veiga, M. M., de Menezes, I. P. P., Valdisser, P. A. M. R., Borba, T. C. O., Melo, L. C., Del Peloso, M. J., Brondani, C., and Vianello, R. P., Molecular characterization of high performance inbred lines of Brazilian common beans, vol. 12, pp. 5467-5484, 2013.
2011
M. P. C. Telles, Peixoto, F. P., Lima, J. S., Resende, L. V., Vianello, R. P., Walter, M. E. M. T., and Collevatti, R. G., Development of microsatellite markers for the endangered Neotropical tree species Tibouchina papyrus (Melastomataceae), vol. 10, pp. 321-325, 2011.
Braga AC, Reis AMM, Leoi LT, Pereira RW, et al. (2007). Development and characterization of microsatellite markers for the tropical tree species Tabebuia aurea (Bignoniaceae). Mol. Ecol. Notes 7: 53-56. http://dx.doi.org/10.1111/j.1471-8286.2006.01521.x   Brandström M and Ellegren H (2008). Genome-wide analysis of microsatellite polymorphism in chicken circumventing the ascertainment bias. Genome Res. 18: 881-887. http://dx.doi.org/10.1101/gr.075242.107 PMid:18356314 PMCid:2413155   Chakraborty R, Kimmel M, Stivers DN, Davison LJ, et al. (1997). Relative mutation rates at di-, tri-, and tetranucleotide microsatellite loci. Proc. Natl. Acad. Sci. U. S. A. 94: 1041-1046. http://dx.doi.org/10.1073/pnas.94.3.1041 PMid:9023379 PMCid:19636   Collevatti RG, Brondani RV and Grattapaglia D (1999). Development and characterization of microsatellite markers for genetic analysis of a Brazilian endangered tree species Caryocar brasiliense. Heredity 83 (Pt 6): 748-756. http://dx.doi.org/10.1046/j.1365-2540.1999.00638.x PMid:10651920   Collevatti RG, Lima JS, Soares TN and Telles MPC (2010). Spatial genetic structure and life history traits in Cerrado tree species: inferences for conservation. Nat. Conserv. 8: 54-59. http://dx.doi.org/10.4322/natcon.00801008   Creste S, Tulmann-Neto A and Figueira A (2001). Detection of single sequence repeat polymorphisms in denaturing polyacrylamide sequencing gels by silver staining. Plant Mol. Biol. Rep. 19: 299-306. http://dx.doi.org/10.1007/BF02772828   Doyle JJ and Doyle JL (1990). Isolation of plant DNA from fresh tissue. Focus 12: 13-15.   Goudet J (2002). FSTAT 2.9.3.2.: A Program to Estimate and Test Gene Diversities and Fixation Indices. Available at [http://www.unil.ch/izea/softwares/fstat.html]. Accessed April 25, 2010.   Goudet J, Raymond M, Meeus T and Rousset F (1996). Testing differentiation in diploid populations. Genet. Res. 144: 1933-1940.   Martins WS, Lucas DC, Neves KF and Bertioli DJ (2009). WebSat - a web software for microsatellite marker development. Bioinformation 3: 282-283. http://dx.doi.org/10.6026/97320630003282 PMid:19255650 PMCid:2646864   Morgante M and Olivieri AM (1993). PCR-amplified microsatellites as markers in plant genetics. Plant J. 3: 175-182. http://dx.doi.org/10.1111/j.1365-313X.1993.tb00020.x PMid:8401603   Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. PMid:17248844 PMCid:1213855   Paetkau D, Calvert W, Stirling I and Strobeck C (1995). Microsatellite analysis of population structure in Canadian polar bears. Mol. Ecol. 4: 347-354. http://dx.doi.org/10.1111/j.1365-294X.1995.tb00227.x PMid:7663752   Reis AMM, Braga AC, Lemes MR, Gribel ROG, et al. (2009). Development and characterization of microsatellite markers for the Brazil nut tree Bertholletia excelsa Humb. & Bonpl. (Lecythidaceae). Mol. Ecol. Resour. 9: 920-923. http://dx.doi.org/10.1111/j.1755-0998.2008.02481.x PMid:21564791   Rozen S and Skaletsky HJ (2000). Primer3: Bioinformatics Methods and Protocols. In: Methods in Molecular Biology (Krawetz S and Misener S, eds.). Humana Press, Totowa, 365-386. Available at [http://frodo.wi.mit.edu/cgi-bin/primer3/primer3_www.cgi.]. Accessed February 8, 2010.   Sambrook J and Russell DW (2001). Molecular Cloning: a Laboratory Manual. 3rd edn. Cold Spring Harbor, New York.   Taramino G and Tingey S (1996). Simple sequence repeats for germplasm analysis and mapping in maize. Genome 39: 277-287. http://dx.doi.org/10.1139/g96-038 PMid:8984002   Wagner HW and Sefc KM (1999). Identity 1.0. Centre for Applied Genetics. University of Agricultural Sciences, Vienna. Available at [http://www.boku.ac.at/zag/forsch/identity.htm]. Accessed April 25, 2010.   Weber JL (1990). Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms. Genomics 7: 524-530. http://dx.doi.org/10.1016/0888-7543(90)90195-Z   Weir BS (1996). Genetic Data Analysis II - Methods for Discrete Population Genetic Data. Sinauer Associates Inc., Sunderland.   Weir BS and Cockerham C (1984). Estimating F-statistics for the analysis of population structure. Evolution 38: 1358- 1370. http://dx.doi.org/10.2307/2408641