Publications

Found 10 results
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2016
B. Hu, Yu, B., Tang, D., Li, S., Wu, Y., Hu, B., Yu, B., Tang, D., Li, S., and Wu, Y., “Daidzein promotes osteoblast proliferation and differentiation in OCT1 cells through stimulating the activation of BMP-2/Smads pathway”, vol. 15, p. -, 2016.
B. Hu, Yu, B., Tang, D., Li, S., Wu, Y., Hu, B., Yu, B., Tang, D., Li, S., and Wu, Y., “Daidzein promotes osteoblast proliferation and differentiation in OCT1 cells through stimulating the activation of BMP-2/Smads pathway”, vol. 15, p. -, 2016.
Z. C. Xu, Cai, H. Z., Li, X., Xu, W. Z., Xu, T., Yu, B., Zou, Q., Xu, L., Xu, Z. C., Cai, H. Z., Li, X., Xu, W. Z., Xu, T., Yu, B., Zou, Q., and Xu, L., “ERCC1 C118T polymorphism has predictive value for platinum-based chemotherapy in patients with late-stage bladder cancer”, vol. 15, p. -, 2016.
Z. C. Xu, Cai, H. Z., Li, X., Xu, W. Z., Xu, T., Yu, B., Zou, Q., Xu, L., Xu, Z. C., Cai, H. Z., Li, X., Xu, W. Z., Xu, T., Yu, B., Zou, Q., and Xu, L., “ERCC1 C118T polymorphism has predictive value for platinum-based chemotherapy in patients with late-stage bladder cancer”, vol. 15, p. -, 2016.
2015
Z. H. Cao, Yin, H. P., Jiang, N., and Yu, B., “Association between ERCC1 and ERCC2 gene polymorphisms and chemotherapy response and overall survival in osteosarcoma”, vol. 14, pp. 10145-10151, 2015.
H. - Y. Cai, Yu, B., Feng, Z. - C., Qi, X., and Wei, X. - J., “Clinical significance of CD44 expression in children with hepatoblastoma”, vol. 14, pp. 13203-13207, 2015.
G. - Y. Lin, Yu, B., Hu, W. - J., Zhang, Y. - Z., Zuo, X. - J., and Wang, Y. - B., “Genetic polymorphism at the KIR gene locus: determination of gene, genotype, and haplotype frequencies in the Xinjiang Han population”, vol. 14, pp. 6213-6222, 2015.
H. Wu, Liu, G. H., Wu, Q., and Yu, B., “Repairing rabbit radial defects by combining bone marrow stroma stem cells with bone scaffold material comprising a core-cladding structure”, vol. 14, pp. 11933-11943, 2015.
2012
H. B. Zhang, Wei, S. G., Yu, B., Li, L., and Lai, J. H., “Nine polymorphic STR loci in the HLA region in the Shaanxi Han population of China”, vol. 11, pp. 2534-2538, 2012.
Cullen M, Malasky M, Harding A and Carrington M (2003). High-density map of short tandem repeats across the human major histocompatibility complex. Immunogenetics 54: 900-910. PMid:12671742   Fiorentino F, Kahraman S, Karadayi H, Biricik A, et al. (2005). Short tandem repeats haplotyping of the HLA region in preimplantation HLA matching. Eur. J. Hum. Genet. 13: 953-958. http://dx.doi.org/10.1038/sj.ejhg.5201435 PMid:15886713   Foissac A, Crouau-Roy B, Faure S, Thomsen M, et al. (1997). Microsatellites in the HLA region: on overview. Tissue Antigens 49: 197-214. http://dx.doi.org/10.1111/j.1399-0039.1997.tb02740.x PMid:9098926   Foissac A, Salhi M and Cambon-Thomsen A (2000). Microsatellites in the HLA region: 1999 update. Tissue Antigens 55: 477-509. http://dx.doi.org/10.1034/j.1399-0039.2000.550601.x PMid:10902606   Gill P, Brinkmann B, d'Aloja E, Andersen J, et al. (1997). Considerations from the European DNA profiling group (EDNAP) concerning STR nomenclature. Forensic Sci. Int. 87: 185-192. http://dx.doi.org/10.1016/S0379-0738(97)00111-4   Gourraud PA, Mano S, Barnetche T, Carrington M, et al. (2004). Integration of microsatellite characteristics in the MHC region: a literature and sequence based analysis. Tissue Antigens 64: 543-555. http://dx.doi.org/10.1111/j.1399-0039.2004.00317.x PMid:15496197   Guo SW and Thompson EA (1992). Performing the exact test of Hardy-Weinberg proportion for multiple alleles. Biometrics 48: 361-372. http://dx.doi.org/10.2307/2532296 PMid:1637966   Kashi Y and King DG (2006). Simple sequence repeats as advantageous mutators in evolution. Trends Genet. 22: 253-259. http://dx.doi.org/10.1016/j.tig.2006.03.005 PMid:16567018   Korzebor A, Zamani M, Nouri K and Modarressi MH (2007). Statistical analysis of six STR loci located in MHC region in Iranian population for preimplantation genetic diagnosis. Int. J. Immunogenet. 34: 441-443. http://dx.doi.org/10.1111/j.1744-313X.2007.00719.x PMid:18001301   Malkki M, Gooley T, Horowitz M and Petersdorf EW (2007). MHC class I, II, and III microsatellite marker matching and survival in unrelated donor hematopoietic cell transplantation. Tissue Antigens 69 (Suppl 1): 46-49. http://dx.doi.org/10.1111/j.1399-0039.2006.759_6.x PMid:17445162   Olaisen B, Bar W, Brinkmann B, Budowle B, et al. (1998). DNA recommendations 1997 of the international society for forensic genetics. Vox Sang. 74: 61-63. http://dx.doi.org/10.1046/j.1423-0410.1998.7410061.x PMid:9481867   Rechitsky S, Kuliev A, Tur-Kaspa I, Morris R, et al. (2004). Preimplantation genetic diagnosis with HLA matching. Reprod. Biomed. Online 9: 210-221. http://dx.doi.org/10.1016/S1472-6483(10)62132-3   Schoske R, Vallone PM, Ruitberg CM and Butler JM (2003). Multiplex PCR design strategy used for the simultaneous amplification of 10 Y chromosome short tandem repeat (STR) loci. Anal. Bioanal. Chem. 375: 333-343. PMid:12589496   Sens-Abuazar C, Santos PS, Bicalho MG, Petzl-Erler ML, et al. (2009). MHC microsatellites in a Southern Brazilian population. Int. J. Immunogenet. 36: 269-274. http://dx.doi.org/10.1111/j.1744-313X.2009.00864.x PMid:19659935   Urquhart A, Kimpton CP, Downes TJ and Gill P (1994). Variation in short tandem repeat sequences--a survey of twelve microsatellite loci for use as forensic identification markers. Int. J. Legal Med. 107: 13-20. http://dx.doi.org/10.1007/BF01247268 PMid:7999641   Walsh PS, Metzger DA and Higuchi R (1991). Chelex 100 as a medium for simple extraction of DNA for PCR-based typing from forensic material. Biotecchniqu06-513.
2011
B. Yu, Wang, X. T., Li, H. W., Zhao, C. J., Wu, C. X., and Deng, X. M., “Structural analysis of a 4414-bp element in Drosophila melanogaster”, vol. 10, pp. 717-730, 2011.
Alberola TM, Bori L and de Frutos R (1997). Structural analysis of Drosophila subobscura gypsy elements (gypsyDs). Genetica 100: 39-48. doi:10.1023/A:1018392404206 PMid:9440257 Bagni C, Bray S, Gogos JA, Kafatos FC, et al. (2002). The Drosophila zinc finger transcription factor CF2 is a myogenic marker downstream of MEF2 during muscle development. Mech. Dev. 117: 265-268. doi:10.1016/S0925-4773(02)00176-4 Bartolome C, Bello X and Maside X (2009). Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes. Genome Biol. 10: R22. doi:10.1186/gb-2009-10-2-r22 PMid:19226459    PMCid:2688281 Benson G (1999). Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 27: 573-580. doi:10.1093/nar/27.2.573 PMid:9862982    PMCid:148217 Capy P, Vitalis R, Langin T, Higuet D, et al. (1996). Relationships between transposable elements based upon the integrase-transposase domains: is there a common ancestor? J. Mol. Evol. 42: 359-368. doi:10.1007/BF02337546 PMid:8661997 Capy P, Bazin C, Higuet D and Langin T (1997). Dynamic and Evolution of Transposable Elements. R.G. Landes Company, Austin. Champ PC, Maurice S, Vargason JM, Camp T, et al. (2004). Distributions of Z-DNA and nuclear factor I in human chromosome 22: a model for coupled transcriptional regulation. Nucleic Acids Res. 32: 6501-6510. doi:10.1093/nar/gkh988 PMid:15598822    PMCid:545456 Dej KJ, Gerasimova T, Corces VG and Boeke JD (1998). A hotspot for the Drosophila gypsy retroelement in the ovo locus. Nucleic Acids Res. 26: 4019-4025. doi:10.1093/nar/26.17.4019 PMid:9705514    PMCid:147786 Ha SC, Lowenhaupt K, Rich A, Kim YG, et al. (2005). Crystal structure of a junction between B-DNA and Z-DNA reveals two extruded bases. Nature 437: 1183-1186. doi:10.1038/nature04088 PMid:16237447 Heath BD, Butcher RD, Whitfield WG and Hubbard SF (1999). Horizontal transfer of Wolbachia between phylogenetically distant insect species by a naturally occurring mechanism. Curr. Biol. 9: 313-316. doi:10.1016/S0960-9822(99)80139-0 Herédia F, Loreto EL and Valente VL (2004). Complex evolution of gypsy in Drosophilid species. Mol. Biol. Evol. 21: 1831-1842. doi:10.1093/molbev/msh183 PMid:15175416 Hsu T, Bagni C, Sutherland JD and Kafatos FC (1996). The transcriptional factor CF2 is a mediator of EGF-R-activated dorsoventral patterning in Drosophila oogenesis. Genes Dev. 10: 1411-1421. doi:10.1101/gad.10.11.1411 Inouye S, Yuki S and Saigo K (1986). Complete nucleotide sequence and genome organization of a Drosophila transposable genetic element, 297. Eur. J. Biochem. 154: 417-425. doi:10.1111/j.1432-1033.1986.tb09414.x PMid:2417839 Jowett T (1986). Preparation of Nucleic Acids. In: Drosophila: a Practical Approach (Roberts DB, ed.). IRL Press, Washington DC, 275-286. Kohany O, Gentles AJ, Hankus L and Jurka J (2006). Annotation, submission and screening of repetitive elements in Repbase: repbasesubmitter and censor. BMC Bioinformatics 7: 474. doi:10.1186/1471-2105-7-474 PMid:17064419    PMCid:1634758 Kotnova AP, Glukhov IA, Karpova NN, Salenko VB, et al. (2007). Evidence for recent horizontal transfer of gypsy-homologous LTR-retrotransposon gtwin into Drosophila erecta followed by its amplification with multiple aberrations. Gene 396: 39-45. doi:10.1016/j.gene.2007.02.019 PMid:17459613 Kumar S, Nei M, Dudley J and Tamura K (2008). MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief. Bioinform. 9: 299-306. doi:10.1093/bib/bbn017 PMid:18417537    PMCid:2562624 Lachaise D, Cariou ML, David JR, Lemeunier F, et al. (1988). Historical Biogeography of the Drosophila melanogaster Species Subgroup. In: Evolutionary Biology. Vol. 22 (Hecht MK, Wallace B and Prance GT, eds.). Plenum Press, New York, 159-225. Leblanc P, Desset S, Dastugue B and Vaury C (1997). Invertebrate retroviruses: ZAM a new candidate in D. melanogaster. EMBO J. 16: 7521-7531. doi:10.1093/emboj/16.24.7521 PMid:9405380    PMCid:1170351 Llorens JV, Clark JB, Martinez-Garay I, Soriano S, et al. (2008). Gypsy endogenous retrovirus maintains potential infectivity in several species of Drosophilids. BMC Evol. Biol. 8: 302. doi:10.1186/1471-2148-8-302 PMid:18976468    PMCid:2585583 Marlor RL, Parkhurst SM and Corces VG (1986). The Drosophila melanogaster gypsy transposable element encodes putative gene products homologous to retroviral proteins. Mol. Cell Biol. 6: 1129-1134. PMid:3023871    PMCid:367623 Minervini CF, Marsano RM, Casieri P, Fanti L, et al. (2007). Heterochromatin protein 1 interacts with 5’UTR of transposable element ZAM in a sequence-specific fashion. Gene 393: 1-10. doi:10.1016/j.gene.2006.12.028 PMid:17343996 Nisha P, Plank JL and Csink AK (2008). Analysis of chromatin structure of genes silenced by heterochromatin in trans. Genetics 179: 359-373. doi:10.1534/genetics.107.084004 PMid:18493059    PMCid:2390615 Pelisson A, Song SU, Prud’homme N, Smith PA, et al. (1994). Gypsy transposition correlates with the production of a retroviral envelope-like protein under the tissue-specific control of the Drosophila flamenco gene. EMBO J. 13: 4401-4411. PMid:7925283    PMCid:395367 Saigo K, Kugimiya W, Matsuo Y, Inouye S, et al. (1984). Identification of the coding sequence for a reverse transcriptase-like enzyme in a transposable genetic element in Drosophila melanogaster. Nature 312: 659-661. doi:10.1038/312659a0 PMid:6209583 Sandelin A, Wasserman WW and Lenhard B (2004). ConSite: web-based prediction of regulatory elements using cross-species comparison. Nucleic Acids Res. 32: W249-W252. doi:10.1093/nar/gkh372 PMid:15215389    PMCid:441510 Savitskaya E, Melnikova L, Kostuchenko M, Kravchenko E, et al. (2006). Study of long-distance functional interactions between Su(Hw) insulators that can regulate enhancer-promoter communication in Drosophila melanogaster. Mol. Cell Biol. 26: 754-761. doi:10.1128/MCB.26.3.754-761.2006 PMid:16428433    PMCid:1347022 Shea MJ, King DL, Conboy MJ, Mariani BD, et al. (1990). Proteins that bind to Drosophila chorion cis-regulatory elements: a new C2H2 zinc finger protein and a C2C2 steroid receptor-like component. Genes Dev. 4: 1128-1140. doi:10.1101/gad.4.7.1128 Song SU, Gerasimova T, Kurkulos M, Boeke JD, et al. (1994). An env-like protein encoded by a Drosophila retroelement: evidence that gypsy is an infectious retrovirus. Genes Dev. 8: 2046-2057. doi:10.1101/gad.8.17.2046 Springer MS and Britten RJ (1993). Phylogenetic relationships of reverse transcriptase and RNase H sequences and aspects of genome structure in the gypsy group of retrotransposons. Mol. Biol. Evol. 10: 1370-1379. PMid:7506345 Stephan W and Li H (2007). The recent demographic and adaptive history of Drosophila melanogaster. Heredity 98: 65-68. doi:10.1038/sj.hdy.6800901 PMid:17006533 Tanaka KK, Bryantsev AL and Cripps RM (2008). Myocyte enhancer factor 2 and chorion factor 2 collaborate in activation of the myogenic program in Drosophila. Mol. Cell Biol. 28: 1616-1629. doi:10.1128/MCB.01169-07 PMid:18160709    PMCid:2258795 Teysset L, Burns JC, Shike H, Sullivan BL, et al. (1998). A Moloney murine leukemia virus-based retroviral vector pseudotyped by the insect retroviral gypsy envelope can infect Drosophila cells. J. Virol. 72: 853-856. PMid:9420299    PMCid:109448 Wang Q, Zhao C, Bai L, Deng X, et al. (2008). Reduction of drosopterin content caused by a 45-nt insertion in Henna pre-mRNA of Drosophila melanogaster. Sci. China C. Life Sci. 51: 702-710. doi:10.1007/s11427-008-0089-6 PMid:18677598 Weber JL and May PE (1989). Abundant class of human DNA polymorphisms which can be typed using the polymerase chain reaction. Am. J. Hum. Genet. 44: 388-396. PMid:2916582    PMCid:1715443 Wei W and Brennan MD (2001). The gypsy insulator can act as a promoter-specific transcriptional stimulator. Mol. Cell Biol. 21: 7714-7720. doi:10.1128/MCB.21.22.7714-7720.2001 PMid:11604507    PMCid:99942 Yuki S, Inouye S, Ishimaru S and Saigo K (1986). Nucleotide sequence characterization of a Drosophila retrotransposon, 412. Eur. J. Biochem. 158: 403-410. doi:10.1111/j.1432-1033.1986.tb09767.x PMid:2426108 Zhang H, Yu H, Ren J and Qu X (2006). Reversible B/Z-DNA transition under the low salt condition and non-B-form polydApolydT selectivity by a cubane-like europium-L-aspartic acid complex. Biophys. J. 90: 3203-3207. doi:10.1529/biophysj.105.078402 PMid:16473901    PMCid:1432110