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2012
G. Agar, Yildirim, N., and Ercisli, S., Genetic and biochemical differentiation in Vitis vinifera (Kabarcik) populations grown at different altitudes in Coruh Valley, vol. 11, pp. 211-220, 2012.
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Population structure of an endangered species living in contrasted habitats: Parnassia palustris (Saxifragaceae). Mol. Ecol. 11: 979-990. http://dx.doi.org/10.1046/j.1365-294X.2002.01499.x PMid:12030977 Buckler ES, Thornsberry JM and Kresovich S (2001). Molecular diversity, structure and domestication of grasses. Genet. Res. 77: 213-218. http://dx.doi.org/10.1017/S0016672301005158 Cheon CP, Chung MY, Chung SG and Chung MG (2002). Allozyme variation of a small subshrub Ardisia japonica (Myrsinaceae) in north eastern Asia. Silvae Genet. 51: 1-6. Despres L, Loriot S and Gaudeul M (2002). Geographic pattern of genetic variation in the European globeflower Trollius europaeus L. (Ranunculaceae) inferred from amplified fragment length polymorphism markers. Mol. Ecol. 11: 2337-2347. http://dx.doi.org/10.1046/j.1365-294X.2002.01618.x Doebley J (1989). Isozymic evidence and evolution of crop plants. In: Isozymes in Plant Biology (Soltis ED and Soltis PM, eds.). Dioscorides, Portland, 165-191. http://dx.doi.org/10.1007/978-94-009-1840-5_9 Erich G and Johann JS (2002). Phenotypic and isozyme variation in Cystopteris fragilis (Pteridophyta) along an altitudinal gradient in Switzerland. Flora 197: 203-213. http://dx.doi.org/10.1078/0367-2530-00031 Feng FJ, Wang FY and Li CS (2004). Genetic differentiation of Pinus koraiensis under different altitude conditions in Changbai Mountains. J. Northeast Univ. 32: 1-3. Gail R, Dennis F, Stuart DM and Rogers HJ (1998). Genome size is negatively correlated with altitude in natural populations of Dactylis glomerata. Ann. Bot. 82: 99-105. http://dx.doi.org/10.1006/anbo.1998.0751 Galet P (2000). Dictionnaire Encyclopédique des Cepages. Hachette Pratique, Paris. Gaudeul M, Taberlet P and Till-Bottraud I (2000). Genetic diversity in an endangered alpine plant, Eryngium alpinum L. (Apiaceae), inferred from amplified fragment length polymorphism markers. Mol. Ecol. 9: 1625-1637. http://dx.doi.org/10.1046/j.1365-294x.2000.01063.x PMid:11050557 Ge S, Oliveira GC, Schaal BA, Gao LZ, et al. (1999). RAPD variation within and between natural populations of the wild rice Oryza rufipogon from China and Brazil. Heredity 82 (Pt 6): 638-644. http://dx.doi.org/10.1046/j.1365-2540.1999.00516.x PMid:10383685 George T, Latha J, George V, Klyanaraman SK, et al. (2001). Analysis of phenotypic and genetic variations among populations of Oryza malampuzhaensis show evidence of altitude-dependent genetic changes. Can. J. Bot. 79: 1090-1098. Gugerli F, Eichenberger K and Schneller JJ (1999). Promiscuity in populations of the cushion plant Saxifraga oppositifolia in the Swiss Alps as inferred from random amplified polymorphic DNA (RAPD). Mol. Ecol. 8: 453-461. http://dx.doi.org/10.1046/j.1365-294X.1999.00586.x Heath D and Williams DR (1979). Life at High Altitude. Edward Arnold, London. Hernández-Verdugo S, Luna-Reyes R and Oyama K (2001). Genetic structure and differentiation of wild and domesticated populations of Capsicum annuum from Mexico. Plant Syst. Evol. 226: 129-142. http://dx.doi.org/10.1007/s006060170061 Heum M, Murrhy JP and Phillips TD (1994). A comparison of RAPD and isozyme analyses for determining the genetic relationships among Avena sterilis L. accessions. Theor. Appl. Genet. 87: 689-696. Hou G, Abblett GR, Pauls KP and Rajcan I (2006). Environmental effects on fatty acid levels in soybean seed oil. Jaocs 83: 759-763. http://dx.doi.org/10.1007/s11746-006-5011-4 Hsiao JY and Lee SM (1999). Genetic diversity and microgeographic differentiation of Yushan cane (Yushania niitakayamensis; Poaceae) in Taiwan. Mol. Ecol. 8: 263-270. http://dx.doi.org/10.1046/j.1365-294X.1999.00563.x Huff DR, Peakall R and Smouse PE (1993). RAPD variation within and among natural populations of outcrossing buffalograss [Buchloë dactyloides (Nutt.) Engelm.]. Theor. Appl. Genet. 86: 927-934. http://dx.doi.org/10.1007/BF00211043 Hug LA and Roger AJ (2007). The impact of fossils and taxon sampling on ancient molecular dating analyses. Mol. Biol. Evol. 24: 1889-1897. http://dx.doi.org/10.1093/molbev/msm115 PMid:17556757 Jaccard P (1908). Nouvelles recherches sur la distribution florale. Bull. Soc. Vaudoise Sci. Nat. 44: 223-270. Landergott U, Holderegger R, Kozlowski G and Schneller JJ (2001). Historical bottlenecks decrease genetic diversity in natural populations of Dryopteris cristata. Heredity 87: 344-355. http://dx.doi.org/10.1046/j.1365-2540.2001.00912.x PMid:11737281 Li JC, Ke Y and Li BS (1998). The variation of genetic diversity of Quercus aquifolioides in different elevations. Acta Bot. Sin. 40: 761-767. http://dx.doi.org/10.1093/abbs/40.8.761 PMid:18685793 Lin RC, Ding ZS, Li LB and Kuang TY (2001). A rapid and efficient DNA minipreparation suitable for screening transgenic plants. Plant Mol. Biol. 19: 379a-379e. http://dx.doi.org/10.1007/BF02772839 McLellan AJ, Prati D, Kaltz O and Schmid B (1997). Structure and Analysis of Phenotypic and Genetic Variation in Clonal Plants. In: The Ecology and Evolution of Clonal Plants (de Kroon H and Van Groenendael JM, eds.). Backhuys, Leiden, 185-210. Meimberg H, Thalhammer S, Brachmann A and Heubl G (2006). Comparative analysis of a translocated copy of the trnK intron in carnivorous family Nepenthaceae. Mol. Phylogenet. Evol. 39: 478-490. http://dx.doi.org/10.1016/j.ympev.2005.11.023 PMid:16414286 Nybom, H and Bartish IV (2000). Effects of life history traits and sampling strategies on genetic diversity estimates obtained with RAPD markers in plants. Persp. Plant Ecol. Evol. Syst. 3: 93-114. http://dx.doi.org/10.1078/1433-8319-00006 Otero-Arnaiz A, Casas A, Hamrick JL and Cruse-Sanders J (2005). Genetic variation and evolution of Polaskia chichipe (Cactaceae) under domestication in the Tehuacan Valley, central Mexico. Mol. Ecol. 14: 1603-1611. http://dx.doi.org/10.1111/j.1365-294X.2005.02494.x PMid:15836636 Oyama K, Hernández-Verdugo S, Sánchez C, González- Rodríguez A, et al. (2006). Genetic structure of wild and domesticated populations of Capsicum annuum (Solanaceae) from Northwestern Mexico analyzed by RAPDs. Genet. Resour. Crop Evol. 53: 553-562. http://dx.doi.org/10.1007/s10722-004-2363-1 Pickersgill B (1969). The Domestication of Peppers. In: The Domestication and Exploitation of Plants and Animals (Ucko PJ and Dimbley GW, eds.). Duckworth, London, 443-450. Rath P, Rajeseger G, Cheng JG and Kumar PP (1998). Phylogenetic analysis of Dipterocarpus using random amplified polymorphic DNA markers. Ann. Bot. 82: 61-65. http://dx.doi.org/10.1006/anbo.1998.0652 Sabrina R and Sabri S (1999). Genetic diversity in natural Cupressus sempervirens L. populations in Turkey. Biochem. Syst. Ecol. 27: 799-814. http://dx.doi.org/10.1016/S0305-1978(99)00028-9 Semang K, Bjornstad A and Stedje B (2003). Genetic diversity and differentiation in Ethiopian populations of Phytolacca dodecandra as revealed by AFLP and RAPD analyses. Genet. Resour. Crop Evol. 50: 649-661. http://dx.doi.org/10.1023/A:1024447404492 Shimizu Y, Ando M and Sakai F (2002). Clonal structure of natural populations of Cryptomeria japonica growing at different positions on slopes, detected using RAPD markers. Biochem. Syst. Ecol. 30: 733-748. http://dx.doi.org/10.1016/S0305-1978(01)00109-0 Sun Y, Xia N and Stapleton CMA (2005). Relationship between Bambusa species (Poaceae, Bambusoidae) revealed by random amplified polymorphic DNA. Biochem. Syst. Ecol. 34: 417-423. http://dx.doi.org/10.1016/j.bse.2005.10.015 Vivier MA and Pretorius IS (2002). Genetically tailored grapevines for the wine industry. Trends Biotechnol. 20: 472-478. http://dx.doi.org/10.1016/S0167-7799(02)02058-9 Yan T, Yan X and Zu Y (1999). A primaryly discuss on the adaptive mechanism at different altitude level of Rhodiola sachalinensis population. Bull. Bot. R 19: 201-206. Young AG, Hill JH, Murray BG and Peakall R (2002). Breeding system, genetic diversity and clonal structure in the sub-alpine forb Rutidosis leiolepis F. Muell. (Asteraceae). Biol. Conserv. 106: 71-78. http://dx.doi.org/10.1016/S0006-3207(01)00230-0 Zeder MA, Emshwiller E, Smith BD and Bradley DG (2006). Documenting domestication: the intersection of genetics and archaeology. Trends Genet. 22: 139-155. http://dx.doi.org/10.1016/j.tig.2006.01.007 PMid:16458995 Zhao LF, Li S, Pan Y, Yan GG, et al. (2001). Population differentiation of Psathyrostachys huashanina along an altitudinal gradient detected by random amplified polymorphic DNA. Acta Bot. Boreali-Occidentalia Sin. 21: 391-400. Zohary D and Hope M (2000). The Domestication of the Plants in the Old World: The Origin and Spread of Cultivated Plants in West Asia, Europe and Nile Valley. 3rd edn. Oxford University Press, Oxford.
2011
S. Ercisli, Agar, G., Yildirim, N., Karlidag, H., Duralija, B., and Vokurka, A., Genetic diversity in wild sweet cherries (Prunus avium) in Turkey revealed by SSR markers, vol. 10, pp. 1211-1219, 2011.
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AC/GT and AG/CT microsatellite repeats in peach (Prunus persica (L) Batsch): isolation, characterisation and cross-species amplification in Prunus. Theor. Appl. Genet. 99: 65-72. doi:10.1007/s001220051209 Clarke JB and Tobutt KR (2003). Development and characterization of polymorphic microsatellites from Prunus avium ‘Napoleon’. Mol. Ecol. Notes 3: 578-580. doi:10.1046/j.1471-8286.2003.00517.x Dirlewanger E, Cosson P, Tavaud M, Aranzana MJ, et al. (2002). Development of microsatellite markers in peach [Prunus persica (L.) Batsch] and their use in genetic diversity analysis in peach and sweet cherry, Prunus avium L.). Theor. Appl. Genet. 105: 127-138. doi:10.1007/s00122-002-0867-7 PMid:12582570 Downey SL and Iezzoni AF (2000). Polymorphic DNA markers in black cherry (Prunus serotina) are identified using sequences from sweet cherry, peach and sour cherry. J. Am. Soc. Hortic. Sci. 125: 76-80. Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19: 11-15. Ercisli S (2004). A short review of the fruit germplasm resources of Turkey. Genet. Res. Crop Evol. 51: 419-435. doi:10.1023/B:GRES.0000023458.60138.79 Guarino C, Santoro S, De SL and Cipriani G (2009). Prunus avium: nuclear DNA study in wild populations and sweet cherry cultivars. Genome 52: 320-337. doi:10.1139/G09-007 PMid:19370088 Gulen H, Ipek A, Ergin S, Akcay ME, et al. (2010). Assessment of genetic relationships among 29 introduced and 49 local sweet cherry accessions in Turkey using AFLP and SSR markers. J. Hortic. Sci. Biotechnol. 85: 427-431. Halilova H and Ercisli S (2010). Several physico-chemical characteristics of cherry laurel (Laurocerasus officinalis Roem) fruits. Biotechnol. Biotechnol. Equip. 24: 1970-1973. doi:10.2478/V10133-010-0059-6 Kacar AY, Iezzoni A and Cetiner S (2005). Sweet cherry cultivar identification by using SSR markers. J. Biol. Sci. 5: 616-619. doi:10.3923/jbs.2005.616.619 Kafkas S, Ozgen M, Dogan Y, Ozcan B, et al. (2008). Molecular characterization of mulberry accessions in Turkey by AFLP markers. J. Am. Soc. Hortic. Sci. 133: 593-597. Lacis G, Rashal I, Ruisa S, Trajkovski V, et al. (2009). Assessment of genetic diversity of Latvian and Swedish sweet cherry (Prunus avium L.) genetic resources collections by using SSR (microsatellite) markers. Sci. Hortic. 121: 451-457. doi:10.1016/j.scienta.2009.03.016 Messina R, Lain O, Marrazzo MT, Cipriani G, et al. (2004). New set of microsatellite loci isolated in apricot. Mol. Ecol. Notes 4: 432-434. doi:10.1111/j.1471-8286.2004.00674.x Mnejja M, Garcia-Mas J, Howad W and Arús P (2005). Development and transportability across Prunus species of 42 polymorphic almond microsatellites. Mol. Ecol. Notes 5: 531-535. doi:10.1111/j.1471-8286.2005.00977.x Olmstead JW, Sebolt AM, Cabrera A, Sooriyapathirana SS, et al. (2008). Construction of an intra-specific sweet cherry (Prunus avium L.) genetic linkage map and synteny analysis with the Prunus reference map. Tree Genet. Genom. 4: 897-910. doi:10.1007/s11295-008-0161-1 Powell W, Morgante M, Andre C, Hanafey M, et al. (1996). The comparison of RFLP, RAPD, AFLP and SSR (microsatellite) markers for germplasm analysis. Mol. Breed. 2: 225-238. doi:10.1007/BF00564200 Rohlf FJ (1998). NTSYS-PC Numerical Taxonomy and Multivariate Analysis System. Exeter Software, Setauket, New York. Schueler S, Tusch A, Schuster M and Ziegenhagen B (2003). Characterization of microsatellites in wild and sweet cherry (Prunus avium L.) - markers for individual identification and reproductive processes. Genome 46: 95-102. doi:10.1139/g02-107 PMid:12669801 Sefc KM, Lopez MS, Lefort F, Botta R, et al. (2000). Microsatellites variability in grapevine cultivars from different European regions and evaluation of assignment testing to assess the geographic origin of cultivars. Theor. Appl. Genet. 100: 498-505. doi:10.1007/s001220050065 Sneath PH and Sokal RR (1973). Numerical Taxonomy. Freeman, San Francisco. Sosinski B, Gannavarapu M, Hager LD, Beck LE, et al. (2000). Characterisation of microsatellite markers in peach (Prunus persica (L.) Batsch). Theor. Appl. Genet. 101: 421-428. doi:10.1007/s001220051499 Struss D, Ahmad R, Southwick SM and Boritzki M (2003). Analysis of sweet cherry (Prunus avium L.) cultivars using SSR and AFLP markers. J. Am. Soc. Hortic. Sci. 128: 904-909. Turkoglu Z, Bilgener S, Ercisli S, Bakir M, et al. (2010). Simple sequence repeat-based assessment of genetic relationships among Prunus rootstocks. Genet. Mol. Res. 9: 2156-2165. doi:10.4238/vol9-4gmr957 PMid:21053179 Vaughan SP and Russell K (2004). Characterization of novel microsatellites and development of multiplex PCR for large-scale population studies in wild cherry; Prunus avium. Mol. Ecol. Notes 4: 429-431. doi:10.1111/j.1471-8286.2004.00673.x Webster AD (1996). The Taxonomic Classification of Sweet and Sour Cherries and a Brief History of Their Cultivation. In: Cherries: Crop Physiology, Production and Uses (Webster AD and Looney NE, eds). CAB International, Wallingford, 3-24. Wünsch A (2009). SSR Markers for fingerprinting Prunus species. Acta Hortic. 814: 689-694. Wünsch A and Hormaza JI (2002). Molecular characterisation of sweet cherry (Prunus avium L.) genotypes using peach [Prunus persica (L.) Batsch] SSR sequences. Heredity 89: 56-63. PMid:12080370 Wünsch A and Hormaza JI (2004). Molecular evaluation of genetic diversity and S-allele composition of local Spanish sweet cherry (Prunus avium L.) cultivars. Genet. Res. Crop Evol. 51: 635-641. doi:10.1023/B:GRES.0000024649.06681.43 Wünsch A, Gella R and Hormaza JI (2004). Molecular characterization of rootstocks for sweet cherry (Prunus avium L.). Acta Hortic. 658: 599-602. Xuan H, Wang R, Buchele M, Moller O, et al. (2009). Microsatellite markers (SSR) as a tool to assist in identification of sweet (Prunus avium) and sour cherry (Prunus cerasus). Acta Hortic. 839: 507-514.4
S. Ercisli, Gadze, J., Agar, G., Yildirim, N., and Hizarci, Y., Genetic relationships among wild pomegranate (Punica granatum genotypes from Coruh Valley in Turkey, vol. 10, pp. 459-464, 2011.
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2010
E. Yildirim, Yildirim, N., Ercisli, S., Agar, G., and Karlidag, H., Genetic relationships among turnip (Brassica rapa var. rapa) genotypes, vol. 9, pp. 987-993, 2010.
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