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2012
H. W. Liu, Shi, R. F., Wang, X. F., Pan, Y. X., Zang, G. Y., and Ma, Z. Y., Cloning of a phosphatidylinositol 4-kinase gene based on fiber strength transcriptome QTL mapping in the cotton species Gossypium barbadense, vol. 11, pp. 3367-3378, 2012.
Arioli T (2005). Genetic engineering for cotton fiber improvement. Pflanzenschutz-Nachrichten Bayer 58: 140-150.   Balla A and Balla T (2006). Phosphatidylinositol 4-kinases: old enzymes with emerging functions. Trends Cell Biol. 16: 351-361. http://dx.doi.org/10.1016/j.tcb.2006.05.003 PMid:16793271   Carricaburu V, Lamia KA, Lo E, Favereaux L, et al. (2003). The phosphatidylinositol (PI)-5-phosphate 4-kinase type II enzyme controls insulin signaling by regulating PI-3,4,5-trisphosphate degradation. Proc. Natl. Acad. Sci. U. S. A. 100: 9867-9872. http://dx.doi.org/10.1073/pnas.1734038100 PMid:12897244 PMCid:187868   Coburn RF, Labelle EF and Baron CB (2006). Polyamines, PI(4,5)P2, and actin polymerization. J. Cell Physiol. 209: 405-412. http://dx.doi.org/10.1002/jcp.20729 PMid:16883568   Delmer DP, Pear JR, Andrawis A and Stalker DM (1995). Genes encoding small GTP-binding proteins analogous to mammalian rac are preferentially expressed in developing cotton fibers. Mol. Gen. Genet. 248: 43-51. http://dx.doi.org/10.1007/BF02456612 PMid:7651326   Felsenstein J (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791. http://dx.doi.org/10.2307/2408678   Galvão RM, Kota U, Soderblom EJ, Goshe MB, et al. (2008). Characterization of a new family of protein kinases from Arabidopsis containing phosphoinositide 3/4-kinase and ubiquitin-like domains. Biochem. J. 409: 117-127. http://dx.doi.org/10.1042/BJ20070959 PMid:17880284   Lingaraj T, Donovan J, Li Z, Li P, et al. (2008). A high-throughput liposome substrate assay with automated lipid extraction process for PI 3-kinase. J. Biomol. Screen. 13: 906-911. http://dx.doi.org/10.1177/1087057108324498 PMid:18812570   Liu HW, Wang XF, Pan YX, Shi RF, et al. (2009). Mining cotton fiber strength candidate genes based on transcriptome mapping. Chin. Sci. Bull. 54: 4651-4657. http://dx.doi.org/10.1007/s11434-009-0708-z   Oude Weernink PA, Han L, Jakobs KH and Schmidt M (2007). Dynamic phospholipid signaling by G protein-coupled receptors. Biochim. Biophys. Acta 1768: 888-900. http://dx.doi.org/10.1016/j.bbamem.2006.09.012 PMid:17054901   Potikha TS, Collins CC, Johnson DI, Delmer DP, et al. (1999). The involvement of hydrogen peroxide in the differentiation of secondary walls in cotton fibers. Plant Physiol. 119: 849-858. http://dx.doi.org/10.1104/pp.119.3.849 PMid:10069824 PMCid:32100   Preuss ML, Schmitz AJ, Thole JM, Bonner HK, et al. (2006). A role for the RabA4b effector protein PI-4Kbeta1 in polarized expansion of root hair cells in Arabidopsis thaliana. J. Cell Biol. 172: 991-998. http://dx.doi.org/10.1083/jcb.200508116 PMid:16567499 PMCid:2063757   Xue HW, Pical C, Brearley C, Elge S, et al. (1999). A plant 126-kDa phosphatidylinositol 4-kinase with a novel repeat structure. Cloning and functional expression in baculovirus-infected insect cells. J. Biol. Chem. 274: 5738-5745. http://dx.doi.org/10.1074/jbc.274.9.5738 PMid:10026194
2011
Y. Zhang, Wang, X. F., Li, Z. K., Zhang, G. Y., and Ma, Z. Y., Assessing genetic diversity of cotton cultivars using genomic and newly developed expressed sequence tag-derived microsatellite markers, vol. 10, pp. 1462-1470, 2011.
Abdalla AM, Reddy OUK, El-Zik KM and Pepper AE (2001). Genetic diversity and relationships of diploid and tetraploid cottons revealed using AFLP. Theor. Appl. Genet. 102: 222-229. doi:10.1007/s001220051639 Anderson JA, Churchill GA, Autrique JE, Tanksley SD, et al. (1993). Optimizing parental selection for genetic linkage maps. Genome 36: 181-186. doi:10.1139/g93-024 PMid:18469981 Brubaker CL and Wendel JF (1994). Reevaluating the origin of domesticated cotton (Gossypium hirsutum; Malvaceae) using nuclear restriction fragment length polymorphisms (RFLPs). Am. J. Bot. 81: 1309-1326. doi:10.2307/2445407 Gutiérrez OA, Basu S, Saha S, Jenkins JN, et al. (2002). Genetic distance among selected cotton genotypes and its relationship with F2 performance. Crop Sci. 42: 1841-1847. doi:10.2135/cropsci2002.1841 Iqbal MJ, Aziz N, Saeed NA, Zafar Y, et al. (1997). Genetic diversity evaluation of some elite cotton varieties by RAPD analysis. Theor. Appl. Genet. 94: 139-144. doi:10.1007/s001220050392 PMid:19352756 Lacape JM, Dessauw D, Rajab M, Noyer JL, et al. (2007). Microsatellite diversity in tetraploid Gossypium germplasm: assembling a highly informative genotyping set of cotton SSRs. Mol. Breed. 19: 45-58. doi:10.1007/s11032-006-9042-1 Liu D, Guo X, Lin Z, Nie Y, et al. (2006). Genetic diversity of Asian cotton (Gossypium arboretum L) in China evaluated by microsatellite analysis. Genet. Resour. Crop Evol. 53: 1145-1152. doi:10.1007/s10722-005-1304-y Liu S, Saha S, Stelly D, Burr B, et al. (2000a). Chromosomal assignment of microsatellite loci in cotton. J. Hered. 91: 326-332. doi:10.1093/jhered/91.4.326 Liu S, Cantrell RG, McCarty JC and Stewart JM (2000b). Simple sequence repeat-based assessment of genetic diversity in cotton race stock accessions. Crop Sci. 40: 1459-1469. doi:10.2135/cropsci2000.4051459x Monica AM, Robert RK, Natalie CU, William LR, et al. (2004). Genetic diversity of public inbreds of sorghum determined by mapped AFLP and SSR markers. Crop Sci. 44: 1236-1244. doi:10.2135/cropsci2004.1236 Morgante M, Hanafey M and Powell W (2002). Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes. Nat. Genet. 30: 194-200. doi:10.1038/ng822 PMid:11799393 Multani DS and Lyon BR (1995). Genetic fingerprinting of Australian cotton cultivars with RAPD markers. Genome 38: 1005-1008. doi:10.1139/g95-132 PMid:18470223 Murtaza N (2006). Cotton genetic diversity study by AFLP markers. Electron. J. Biotechnol. 9: 457-460. doi:10.2225/vol9-issue4-fulltext-9 Nei M and Li WH (1979). Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc. Natl. Acad. Sci. U. S. A. 76: 5269-5273. doi:10.1073/pnas.76.10.5269 Park YH, Alabady MS, Ulloa M, Sickler B, et al. (2005). Genetic mapping of new cotton fiber loci using EST-derived microsatellites in an interspecific recombinant inbred line cotton population. Mol. Genet. Genomics 274: 428-441. doi:10.1007/s00438-005-0037-0 PMid:16187061 Reddy OUK, Pepper AE, Abdurakhmonov I, Saha S, et al. (2001). New dinucleotide and trinucleotide microsatellite marker resources for cotton genome research. J. Cotton Sci. 5: 103-113. Rohlf FJ (2000). NTSYS-pc: Numerical Taxonomy and Multivariate Analysis System, Version 2.1. User Guide. Exeter Software, New York. Rong J, Abbey C, Bowers JE, Brubaker CL, et al. (2004). A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics 166: 389-417. doi:10.1534/genetics.166.1.389 PMid:15020432    PMCid:1470701 Saha S, Wu J, Jenkins JN, McCarty JC Jr, et al. (2004). Effect of chromosome substitutions from Gossypium barbadense L.3-79 into G. hirsutum L. TM-1 on agronomic and fiber traits. J. Cotton Sci. 8: 162-169. Sun DL, Sun JL, Jia YH, Ma ZY, et al. (2009). Genetic diversiry of colored analyzed by simple sequence repeat markers. Int. J. Plant Sci. 170: 76-82. doi:10.1086/593037 Tatineni V, Canterell RG and Davis DD (1996). Genetic diversity in elite cotton germplasm determined by morphological characteristics and RAPDs. Crop Sci. 36: 186-192. doi:10.2135/cropsci1996.0011183X003600010033x Turkoglu Z, Bilgener S, Ercisli S, Bakir M, et al. (2010). Simple sequence repeat-based assessment of genetic relationships among Prunus rootstocks. Genet. Mol. Res. 9: 2156-2165. doi:10.4238/vol9-4gmr957 PMid:21053179 Ulloa M, Brubaker C and Chee P (2007). Cotton. In: Genome Mapping & Molecular Breeding (Kole C, ed.). Vol. 6. Technical Crops Springer, New York. Wang X, Ma J, Yang S, Zhang G, et al. (2007). Assessment of genetic diversity among Chinese upland cottons with Fusarium and/or Verticillium wilts resistance by AFLP and SSR markers. Front. Agric. China 1: 129-135. doi:10.1007/s11703-007-0023-x Zhang J and Stewart JM (2000). Economical and rapid method for extracting cotton genomic DNA. J. Cotton Sci. 4: 193-201. Zhang J, Wu YT, Guo WZ and Zhang TZ (2000). Fast screening of microsatellite markers in cotton with PAGE silver staining. J. Cotton Sci. 12: 267-269. Zhu LF, Zhang XL and Nie YC (2003). Analysis of genetic diversity in upland cotton (Gossypium hirsutum L.) cultivars from China and foreign countries by RAPDs and SSRs. J. Agric. Biotechnol. 11: 450-455.