Publications
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“TNF-αG-308A polymorphism is associated with insulin resistance: a meta-analysis”, vol. 14, pp. 563-573, 2015.
, “Effect of mutations in a simian virus 40 PolyA signal enhancer on green fluorescent protein reporter gene expression”, vol. 10, pp. 1866-1883, 2011.
, Cai L, Fritz D, Stefanovic L and Stefanovic B (2010). Binding of LARP6 to the conserved 5' stem-loop regulates translation of mRNAs encoding type I collagen. J. Mol. Biol. 395: 309-326.
http://dx.doi.org/10.1016/j.jmb.2009.11.020
PMid:19917293 PMCid:2826804
Chou SH, Tseng YY and Chu BY (1999). Stable formation of a pyrimidine-rich loop hairpin in a cruciform promoter. J. Mol. Biol. 292: 309-320.
http://dx.doi.org/10.1006/jmbi.1999.3066
PMid:10493877
Costa FF (2008). Non-coding RNAs, epigenetics and complexity. Gene 410: 9-17.
http://dx.doi.org/10.1016/j.gene.2007.12.008
PMid:18226475
Costantini M and Bernardi G (2008). Correlations between coding and contiguous non-coding sequences in isochore families from vertebrate genomes. Gene 410: 241-248.
http://dx.doi.org/10.1016/j.gene.2007.12.016
PMid:18252269
Dai X, Kloster M and Rothman-Denes LB (1998). Sequence-dependent extrusion of a small DNA hairpin at the N4 virion RNA polymerase promoters. J. Mol. Biol. 283: 43-58.
http://dx.doi.org/10.1006/jmbi.1998.2096
PMid:9761672
Darlow JM and Leach DR (1998). Evidence for two preferred hairpin folding patterns in d(CGG).d(CCG) repeat tracts in vivo. J. Mol. Biol. 275: 17-23.
http://dx.doi.org/10.1006/jmbi.1997.1452
PMid:9451435
Frolov I, Hardy R and Rice CM (2001). Cis-acting RNA elements at the 5' end of Sindbis virus genome RNA regulate minus- and plus-strand RNA synthesis. RNA 7: 1638-1651.
http://dx.doi.org/10.1017/S135583820101010X
PMid:11720292 PMCid:1370205
Gleghorn ML, Davydova EK, Rothman-Denes LB and Murakami KS (2008). Structural basis for DNA-hairpin promoter recognition by the bacteriophage N4 virion RNA polymerase. Mol. Cell 32: 707-717.
http://dx.doi.org/10.1016/j.molcel.2008.11.010
PMid:19061645 PMCid:2639713
Grimwood J, Gordon LA, Olsen A, Terry A, et al. (2004). The DNA sequence and biology of human chromosome 19. Nature 428: 529-535.
http://dx.doi.org/10.1038/nature02399
PMid:15057824
Kang H, Feng M, Schroeder ME, Giedroc DP, et al. (2006). Putative cis-acting stem-loops in the 5' untranslated region of the severe acute respiratory syndrome coronavirus can substitute for their mouse hepatitis virus counterparts. J. Virol. 80: 10600-10614.
http://dx.doi.org/10.1128/JVI.00455-06
PMid:16920822 PMCid:1641749
Kuznetsov SV, Ren CC, Woodson SA and Ansari A (2008). Loop dependence of the stability and dynamics of nucleic acid hairpins. Nucleic Acids Res. 36: 1098-1112.
http://dx.doi.org/10.1093/nar/gkm1083
PMid:18096625 PMCid:2275088
Lander ES, Linton LM, Birren B, Nusbaum C, et al. (2001). Initial sequencing and analysis of the human genome. Nature 409: 860-921.
http://dx.doi.org/10.1038/35057062
PMid:11237011
Li L, Kang H, Liu P, Makkinje N, et al. (2008). Structural lability in stem-loop 1 drives a 5' UTR-3' UTR interaction in coronavirus replication. J. Mol. Biol. 377: 790-803.
http://dx.doi.org/10.1016/j.jmb.2008.01.068
PMid:18289557 PMCid:2652258
Li Y, Ho ES, Gunderson SI and Kiledjian M (2009). Mutational analysis of a Dcp2-binding element reveals general enhancement of decapping by 5'-end stem-loop structures. Nucleic Acids Res. 37: 2227-2237.
http://dx.doi.org/10.1093/nar/gkp087
PMid:19233875 PMCid:2673433
Lu ZJ, Zhai Y, Wang XF and Song SX (2003). DNA sequence composition on human X chromosome differing from that on chromosomes 6,7,8,10,11 and 12. Genet. Sin. 30: 1051-1060.
Nelson MJ and Green BR (2005). Double hairpin elements and tandem repeats in the non-coding region of Adenoides eludens chloroplast gene minicircles. Gene 358: 102-110.
http://dx.doi.org/10.1016/j.gene.2005.05.024
PMid:16043313
Nickens DG and Hardy RW (2008). Structural and functional analyses of stem-loop 1 of the Sindbis virus genome. Virology 370: 158-172.
http://dx.doi.org/10.1016/j.virol.2007.08.006
PMid:17900652
Rosskopf JJ, Upton JH 3rd, Rodarte L, Romero TA, et al. (2010). A 3' terminal stem-loop structure in Nodamura virus RNA2 forms an essential cis-acting signal for RNA replication. Virus Res. 150: 12-21.
http://dx.doi.org/10.1016/j.virusres.2010.02.006
PMid:20176063 PMCid:3017585
Sean P, Nguyen JHC and Semler BL (2009). Altered interactions between stem-loop IV within the 5' noncoding region of coxsackievirus RNA and poly(rC) binding protein 2: effects on IRES-mediated translation and viral infectivity. Virology 389: 45-58.
http://dx.doi.org/10.1016/j.virol.2009.03.012
PMid:19446305 PMCid:2694229
Ueno M, Kodama EN, Shimura K, Sakurai Y, et al. (2009). Synonymous mutations in stem-loop III of Rev responsive elements enhance HIV-1 replication impaired by primary mutations for resistance to enfuvirtide. Antiviral Res. 82: 67-72.
http://dx.doi.org/10.1016/j.antiviral.2009.02.002
PMid:19428597
Wang XF, Wang X, Liu J, Feng J, et al. (2009a). Alu tandem sequences inhibit GFP gene expression by triggering chromatin wrapping. Genes Genom. 31: 209-215.
http://dx.doi.org/10.1007/BF03191192
Wang XF, Jin X, Wang X, Liu J, et al. (2009b). Effects of L1-ORF2 fragments on green fluorescent protein gene expression. Genet. Mol. Biol. 32: 688-696.
http://dx.doi.org/10.1590/S1415-47572009005000068
PMid:21637438 PMCid:3036906
Xu ZL, Mizuguchi H, Ishii-Watabe A, Uchida E, et al. (2001). Optimization of transcriptional regulatory elements for constructing plasmid vectors. Gene 272: 149-156.
http://dx.doi.org/10.1016/S0378-1119(01)00550-9
Yin K, Wang X, Ma H, Xie Y, et al. (2010). Impact of copy number of distinct SV40PolyA segments on expression of a GFP reporter gene. Sci. China Life Sci. 53: 606-612.
http://dx.doi.org/10.1007/s11427-010-0110-8
PMid:20596944
Yu L and Markoff L (2005). The topology of bulges in the long stem of the flavivirus 3'stem-loop is a major determinant of RNA replication competence. J. Virol. 79: 2309-2324.
http://dx.doi.org/10.1128/JVI.79.4.2309-2324.2005
PMid:15681432 PMCid:546603
“Endothelial nitric oxide synthase gene polymorphisms and essential hypertension in Han Chinese”, vol. 9, pp. 1896-1907, 2010.
, Casas JP, Bautista LE, Humphries SE and Hingorani AD (2004). Endothelial nitric oxide synthase genotype and ischemic heart disease: meta-analysis of 26 studies involving 23028 subjects. Circulation 109: 1359-1365.
http://dx.doi.org/10.1161/01.CIR.0000121357.76910.A3
PMid:15007011
Casas JP, Cavalleri GL, Bautista LE, Smeeth L, et al. (2006). Endothelial nitric oxide synthase gene polymorphisms and cardiovascular disease: a HuGE review. Am. J. Epidemiol. 164: 921-935.
http://dx.doi.org/10.1093/aje/kwj302
PMid:17018701
Dosh SA (2002). The treatment of adults with essential hypertension. J. Fam. Pract. 51: 74-80.
PMid:11927069
Forte P, Copland M, Smith LM, Milne E, et al. (1997). Basal nitric oxide synthesis in essential hypertension. Lancet 349: 837-842.
http://dx.doi.org/10.1016/S0140-6736(96)07631-3
Higgins JP and Thompson SG (2002). Quantifying heterogeneity in a meta-analysis. Stat. Med. 21: 1539-1558.
http://dx.doi.org/10.1002/sim.1186
PMid:12111919
Huang HB, Lin LX and Chen MQ (2002). Association of polymorphism of endothelial nitric oxide synthase gene with essential hypertension and type 2 diabetes mellitus. Chin. J. Endocrinol. Metab. 18: 16-19.
Huang PL, Huang Z, Mashimo H, Bloch KD, et al. (1995). Hypertension in mice lacking the gene for endothelial nitric oxide synthase. Nature 377: 239-242.
http://dx.doi.org/10.1038/377239a0
PMid:7545787
Li DB, Hua Q, Pi L, Zou HQ, et al. (2003). Association of polymorphism of endothelial nitric oxide synthase gene with essential hypertension. Chin. J. Hypertens. 11: 552-554.
Li DB, Hua Q and Pi L (2004). Association of G894T polymorphism of endothelial nitric oxide synthase gene and essential hypertension. Chin. J. Hypertens. 12: 326-330.
Li DB, Hua Q and Pi L (2006). The relationship of T786C polymorphism of endothelial nitric oxide synthase gene to essential hypertension. J. Cap. Univ. Med. Sci. 27: 226-229.
Li DJ, Wu WF, Xu L, Jiang XB, et al. (2009). Effect of G894T mutation in the endothelial nitric oxide synthase gene and abnormality of waist-to-hip ratio on essential hypertension. Chin. Gen. Pract. 12: 1173-1175, 1178.
Liang Q, Yang XY, Yang G and Cui JH (2006). Association of angiotensinogen and endothelial nitric oxide synthase gene polymorphism with essential hypertension. J. Youjiang Med. Col. Nationalities 28: 341-343.
Liu HZ and Ha DW (2002). Relationship between 894G→T polymorphism of endothelial nitric oxide synthase gene and essential hypertension. J. Chin. Circ. 17: 42-44.
Ma HX, Xie ZX, Niu YH, Li ZY, et al. (2006). Single nucleotide polymorphisms in NOS3 A-922G, T-786C and G894T: a correlation study of the distribution of their allelic combinations with hypertension in Chinese Han population. Yi. Chuan 28: 3-10.
PMid:16469708
Macaskill P, Walter SD and Irwig L (2001). A comparison of methods to detect publication bias in meta-analysis. Stat. Med. 20: 641-654.
http://dx.doi.org/10.1002/sim.698
PMid:11223905
Mayer B and Hemmens B (1997). Biosynthesis and action of nitric oxide in mammalian cells. Trends Biochem. Sci. 22: 477-481.
http://dx.doi.org/10.1016/S0968-0004(97)01147-X
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http://dx.doi.org/10.1111/j.1432-1033.1994.tb19045.x
PMid:7519987
Miyamoto Y, Saito Y, Kajiyama N, Yoshimura M, et al. (1998). Endothelial nitric oxide synthase gene is positively associated with essential hypertension. Hypertension 32: 3-8.
http://dx.doi.org/10.1161/01.HYP.32.1.3
PMid:9674630
Nejatizadeh A, Kumar R, Stobdan T, Goyal AK, et al. (2008). Endothelial nitric oxide synthase gene haplotypes and circulating nitric oxide levels significantly associate with risk of essential hypertension. Free Radic. Biol. Med. 44: 1912-1918.
http://dx.doi.org/10.1016/j.freeradbiomed.2008.02.004
PMid:18325347
Newhouse SJ, Wallace C, Dobson R, Mein C, et al. (2005). Haplotypes of the WNK1 gene associate with blood pressure variation in a severely hypertensive population from the British genetics of hypertension study. Hum. Mol. Genet. 14: 1805-1814.
http://dx.doi.org/10.1093/hmg/ddi187
PMid:15888480
Niu WQ, Qi Y, Zhang LT, Qi YX, et al. (2009). Endothelial nitric oxide synthase genetic variation and essential hypertension risk in Han Chinese: the Fangshan study. J. Hum. Hypertens. 23: 136-139.
http://dx.doi.org/10.1038/jhh.2008.111
PMid:18769442
Pereira TV, Rudnicki M, Cheung BM, Baum L, et al. (2007). Three endothelial nitric oxide (NOS3) gene polymorphisms in hypertensive and normotensive individuals: meta-analysis of 53 studies reveals evidence of publication bias. J. Hypertens. 25: 1763-1774.
http://dx.doi.org/10.1097/HJH.0b013e3281de740d
PMid:17762636
Schmidt HH and Walter U (1994). NO at work. Cell 78: 919-925.
http://dx.doi.org/10.1016/0092-8674(94)90267-4
Tan JC, Zhu ZM, Zhu SJ, Yu CQ, et al. (2003). The GNB3 and eNOS gene polymorphisms in patients with essential hypertension. Chin. J. Cardiol. 31: 16-19.
Tang JL (2005). Selection bias in meta-analyses of gene-disease associations. PLoS. Med. 2: e409.
http://dx.doi.org/10.1371/journal.pmed.0020409
PMid:16363911 PMCid:1285067
Thaha M, Pranawa, Yogiantoro M, Sutjipto, et al. (2008). Association of endothelial nitric oxide synthase Glu298Asp polymorphism with end-stage renal disease. Clin. Nephrol. 70: 144-154.
PMid:18793530
Thomas GD, Zhang W and Victor RG (2001). Nitric oxide deficiency as a cause of clinical hypertension: promising new drug targets for refractory hypertension. JAMA 285: 2055-2057.
http://dx.doi.org/10.1001/jama.285.16.2055
PMid:11311074
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Trikalinos TA, Salanti G, Khoury MJ and Ioannidis JP (2006). Impact of violations and deviations in Hardy-Weinberg equilibrium on postulated gene-disease associations. Am. J. Epidemiol. 163: 300-309.
http://dx.doi.org/10.1093/aje/kwj046
PMid:16410351
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Wu XF and Huang QY (2009). The a/b polymorphism in the eNOS gene is associated with essential hypertension but not type 2 diabetes in hubei Han Chinese. Prog. Mod. Biomed. 9: 69-72.
Yuan H, Li QX, Ping YH and Liu GZ (2007). Polymorphisms of endothelial nitric oxide synthase NOS3 4a/b and HindIII restriction site of the Y-chromosome in essential hypertension. Chin. J. Lab. Med. 30: 392-394.
Zhao Q, Su SY, Chen SF, Li B, et al. (2006). Association study of the endothelial nitric oxide synthase gene polymorphisms with essential hypertension in northern Han Chinese. Chin Med. J. 119: 1065-1071.
Zhao XY, Guo X, Qiu CC, Zhang DH, et al. (2005). Relationship of endothelial nitric oxide synthase gene polymorphism, the 27-bp repeat in intron 4 with essential hypertension of the northern Han nationality in China. Chin. J. Rehabil. Theory Pract. 11: 422-424.
Zintzaras E and Ioannidis JP (2005). Heterogeneity testing in meta-analysis of genome searches. Genet. Epidemiol. 28: 123-137.
http://dx.doi.org/10.1002/gepi.20048
PMid:15593093
Zintzaras E and Lau J (2008). Synthesis of genetic association studies for pertinent gene-disease associations requires appropriate methodological and statistical approaches. J. Clin. Epidemiol. 61: 634-645.
http://dx.doi.org/10.1016/j.jclinepi.2007.12.011
PMid:18538260
Zintzaras E, Kitsios G and Stefanidis I (2006). Endothelial NO synthase gene polymorphisms and hypertension: a meta-analysis. Hypertension 48: 700-710.
http://dx.doi.org/10.1161/01.HYP.0000238124.91161.02
PMid:16940230