Publications

Found 2 results
Filters: Author is E.T. Caixeta  [Clear All Filters]
2011
R. F. Missio, Caixeta, E. T., Zambolim, E. M., Pena, G. F., Zambolim, L., Dias, L. A. S., and Sakiyama, N. S., Genetic characterization of an elite coffee germplasm assessed by gSSR and EST-SSR markers, vol. 10, pp. 2366-2381, 2011.
Aggarwal RK, Hendre PS, Varshney RK, Bhat PR, et al. (2007). Identification, characterization and utilization of EST-derived genic microsatellite markers for genome analyses of coffee and related species. Theor. Appl. Genet. 114: 359-372. http://dx.doi.org/10.1007/s00122-006-0440-x PMid:17115127 Baek HJ, Beharav A and Nevo E (2003). Ecological-genomic diversity of microsatellites in wild barley, Hordeum spontaneum, populations in Jordan. Theor. Appl. Genet. 106: 397-410. PMid:12589539 Baruah A, Naik V, Hendre PS and Rajkumar R (2003). Isolation and characterization of nine microsatellite markers from Coffea arabica L., showing wide cross-species amplifications. Mol. Ecol. Notes 3: 647-650. http://dx.doi.org/10.1046/j.1471-8286.2003.00544.x Beharav A and Nevo E (2003). Predictive validity of discriminant analysis for genetic data. Genetica 119: 259-267. http://dx.doi.org/10.1023/B:GENE.0000003666.33328.22 PMid:14686605 Blair MW, Giraldo MC, Buendia HF, Tovar E, et al. (2006). Microsatellite marker diversity in common bean (Phaseolus vulgaris L.). Theor. Appl. Genet. 113: 100-109. http://dx.doi.org/10.1007/s00122-006-0276-4 PMid:16614831 Brito GG, Caixeta ET, Gallina AP, Maciel-Zambolim E, et al. (2010). Inheritance of coffee leaf rust resistance and identification of AFLP markers linked to the resistance gene. Euphytica 173: 255-264. http://dx.doi.org/10.1007/s10681-010-0119-x Chabane K, Ablett GA, Cordeiro GM, Valkoun J, et al. (2006). EST versus genomic derived microsatellite markers for genotyping wild and cultivated barley. Genet. Resour. Crop Evol. 52: 903-909. http://dx.doi.org/10.1007/s10722-003-6112-7 Cho YG, Ishii T, Temnykh S, Chen X, et al. (2000). Diversity of microsatellites derived from genomic libraries and GenBank sequences in rice (Oryza sativa L.). Theor. Appl. Genet. 100: 713-722. http://dx.doi.org/10.1007/s001220051343 Cordeiro GM, Casu R, McIntyre CL, Manners JM, et al. (2001). Microsatellite markers from sugarcane (Saccharum spp.) ESTs cross transferable to erianthus and sorghum. Plant Sci. 160: 1115-1123. http://dx.doi.org/10.1016/S0168-9452(01)00365-X Cruz CD (2007). Genes versão 2007.0.0, Programa GENES versão Windows. Available at [www.ufv.br/dbg/genes/genes.htm]. Accessed October 21, 2010. Diniz LEC, Sakiyama NS, Lashermes P, Caixeta ET, et al. (2005). Analysis of AFLP markers associated to the Mex-1 resistance locus in Icatu progenies. Crop Breed. Appl. Biotechnol. 5: 387-393. Donini P, Stephenson P, Bryan GJ and Koebner RMD (1998). The potential of microsatellite for high throughput genetic diversity assessment in wheat and barley. Genet. Resour. Crop Evol. 45: 415-421. http://dx.doi.org/10.1023/A:1008612917967 Eujayl I, Sorrells M, Baum M, Wolters P, et al. (2001). Assessment of genotypic variation among cultivated durum wheat based on EST-SSRs and genomic SSRs. Euphytica 119: 39-43. http://dx.doi.org/10.1023/A:1017537720475 Excoffier L, Smouse PE and Quattro JM (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491. PMid:1644282    PMCid:1205020 Fahima T, Sun GL, Beharav A, Krugman T, et al. (1999). RAPD polymorphism of wild emmer wheat populations, Triticum dicoccoides, in Israel. Theor. Appl. Genet. 98: 434-447. http://dx.doi.org/10.1007/s001220051089 Gadaleta A, Mangini G, Mulè G and Blanco A (2007). Characterization of dinucleotide and trinucleotide EST-derived microsatellites in the wheat genome. Euphytica 153: 73-85. http://dx.doi.org/10.1007/s10681-006-9243-z Gupta PK and Varshney RK (2000). The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat. Euphytica 113: 163-185. http://dx.doi.org/10.1023/A:1003910819967 Gur-Arie R, Cohen CJ, Eitan Y, Shelef L, et al. (2000). Simple sequence repeats in Escherichia coli: abundance, distribution, composition, and polymorphism. Genome Res. 10: 62-71. PMid:10645951    PMCid:310497 Hamilton MB, Pincus EL, Di FA and Fleischer RC (1999). Universal linker and ligation procedures for construction of genomic DNA libraries enriched for microsatellites. Biotechniques 27: 500-507. PMid:10489609 He G, Meng R, Gao H, Guo B, et al. (2005). Simple sequence repeat markers for botanical varieties of cultivated peanut (Arachis hypogaea L.). Euphytica 142: 131-136. http://dx.doi.org/10.1007/s10681-005-1043-3 Hendre PS, Phanindranath R, Annapurna V, Lalremruata A, et al. (2008). Development of new genomic microsatellite markers from robusta coffee (Coffea canephora Pierre ex A. Froehner) showing broad cross-species transferability and utility in genetic studies. BMC Plant Biol. 8: 51. http://dx.doi.org/10.1186/1471-2229-8-51 PMid:18447947    PMCid:2396172 Jaccard P (1908). Nouvelles Recherches sur la Distribution Florale. Bull. Soc. Vdoise Sci. Nat. 44: 223-270. Leigh F, Lea V, Law J and Wolteret P (2003). Assessment of EST- and genomic microsatellite markers for variety discrimination and genetic diversity studies in wheat. Euphytica 133: 359-366. http://dx.doi.org/10.1023/A:1025778227751 Maluf MP, Silvestrini M, Ruggiero LMC and Guerreiro Filho O (2005). Genetic diversity of cultivated Coffea arabica inbred lines assessed by RAPD, AFLP and SSR marker systems. Sci. Agric. 62: 366-373. http://dx.doi.org/10.1590/S0103-90162005000400010 Metais I, Hamon B, Jalouzot R and Peltier D (2002). Structure and level of genetic diversity in various bean types evidenced with microsatellite markers isolated from a genomic enriched library. Theor. Appl. Genet. 104: 1346-1352. http://dx.doi.org/10.1007/s00122-002-0901-9 PMid:12582590 Missio RF, Caixeta ET, Zambolim EM and Zambolim L (2009a). Development and validation of SSR markers for Coffea arabica L. Crop Breed. Appl. Biotechnol. 9: 361-371. Missio RF, Caixeta ET, Zambolim EM and Pena GF (2009b). Assessment of EST-SSR markers for genetic analysis on coffee. Bragantia 68: 576-581. http://dx.doi.org/10.1590/S0006-87052009000300003 Missio RF, Caixeta ET, Zambolim EM and Zambolim L (2010). Polymorphic information content of SSR markers for Coffea spp. Crop Breed. Appl. Biotechnol. 10: 89-94. Pessoni LA (2007). Estratégias de Análise da Diversidade em Germoplasmas de Cajueiro (Anacardium spp. L.). Doctoral thesis, Universidade Federal de Viçosa, Viçosa. Poncet V, Hamon P, Minier J, Carasco C, et al. (2004). SSR cross-amplification and variation within coffee trees (Coffea spp.). Genome 47: 1071-1081. http://dx.doi.org/10.1139/g04-064 PMid:15644965 Poncet V, Rondeau M, Tranchant C, Cayrel A, et al. (2006). SSR mining in coffee tree EST databases: potential use of EST-SSRs as markers for the Coffea genus. Mol. Genet. Genomics 276: 436-449. http://dx.doi.org/10.1007/s00438-006-0153-5 PMid:16924545 SAS Institute (1996). SAS User Guide: Statistics, Version 609. SAS Institute Inc., Cary. Scott KD, Eggler P, Seaton G and Rossetto M (2000). Analysis of SSRs derived from grape ESTs. Theor. Appl. Genet. 100: 723-726. http://dx.doi.org/10.1007/s001220051344 Silvestrini M, Junqueira MG, Favarin AC and Guerreiro-Filho O (2007). Genetic diversity and structure of Ethiopian, Yemen and Brazilian Coffea arabica L. accessions using microsatellites markers. Genet. Resour. Crop Evol. 54: 1367-1379. http://dx.doi.org/10.1007/s10722-006-9122-4 Tanksley SD and McCouch SR (1997). Seed banks and molecular maps: unlocking genetic potential from the wild. Science 277: 1063-1066. http://dx.doi.org/10.1126/science.277.5329.1063 PMid:9262467 Van de Peer Y and De Wachter R (1994). TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comp. Appl. Biosci. 10: 569-570. PMid:7828077 Varshney RK, Graner A and Sorrells ME (2005). Genic microsatellite markers in plants: features and applications. Trends Biotechnol. 23: 48-55. http://dx.doi.org/10.1016/j.tibtech.2004.11.005 PMid:15629858