Publications
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“Comparison of genetic diversity between wild-caught broodstock and hatchery-produced offspring populations of the vulnerable Korean kelp grouper (Epinephelus bruneus) by microsatellites”, vol. 13, pp. 9675-9686, 2014.
, “Genetic characterization of hatchery populations of Korean spotted sea bass (Lateolabrax maculatus) using multiplex polymerase chain reaction assays”, vol. 13, pp. 6701-6715, 2014.
, , , “Comparative genetic diversity of wild and hatchery-produced populations of tongue sole (Cynoglossus semilaevis) using multiplex PCR assays with polymorphic microsatellite markers”, vol. 12, pp. 6331-6343, 2013.
, “Comparative genetic variability between broodstock and offspring populations of Korean starry flounder used for stock enhancement in a hatchery by using microsatellite DNA analyses”, vol. 12, pp. 6319-6330, 2013.
, “Genetic relationships of Pacific abalone (Haliotidae) species determined using universal rice primer-polymerase chain reaction fingerprinting”, vol. 12, pp. 6309-6318, 2013.
, , , “Population genetics of the Pacific abalone (Haliotis discus hannai) in Korea inferred from microsatellite marker analysis”, vol. 11, pp. 3904-3922, 2012.
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An HS, Jee YJ, Min KS, Kim BL, et al. (2005). Phylogenetic analysis of six species of Pacific abalone (Haliotidae) based on DNA sequences of 16s rRNA and cytochrome c oxidase subunit I mitochondrial genes. Mar. Biotechnol. 7: 373- 380.
http://dx.doi.org/10.1007/s10126-004-4405-2
PMid:15976933
An HS, Hong SW, Kim EM, Lee JH, et al. (2010a). Comparative genetic diversity of wild and released populations of Pacific abalone Haliotis discus discus in Jeju, Korea, based on cross-species microsatellite markers including two novel loci. Anim. Cells Syst. 14: 305-313.
http://dx.doi.org/10.1080/19768354.2010.525813
An HS, Lee JH, Dong CM, Noh JK, et al. (2010b). New polymorphic microsatellite markers in Pacific abalone Haliotis discus hannai and their application to genetic characterization of wild and aquaculture populations. Genes Genomics 32: 413-418.
http://dx.doi.org/10.1007/s13258-010-0037-2
An HS, Kim EM, Lee JW, Dong CM, et al. (2011a). Novel polymorphic microsatellite loci for the Korean black scraper (Thamnaconus modestus), and their application to the genetic characterization of wild and farmed populations. Int. J. Mol. Sci. 12: 4104-4119.
http://dx.doi.org/10.3390/ijms12064104
PMid:21747727 PMCid:3131611
An HS, Lee JW, Kim HC and Myeong JI (2011b). Genetic characterization of five hatchery populations of the pacific abalone (Haliotis discus hannai) using microsatellite markers. Int. J. Mol. Sci. 12: 4836-4849.
http://dx.doi.org/10.3390/ijms12084836
PMid:21954328 PMCid:3179135
Antao T, Lopes A, Lopes RJ, Beja-Pereira A, et al. (2008). LOSITAN: a workbench to detect molecular adaptation based on a FST-outlier method. BMC Bioinformatics 9: 323.
http://dx.doi.org/10.1186/1471-2105-9-323
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Cornuet JM and Luikart G (1996). Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144: 2001-2014.
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DeWoody JA and Avise JC (2000). Microsatellite variation in marine, freshwater and anadromous fishes compared with other animals. J. Fish Biol. 56: 461-473.
http://dx.doi.org/10.1111/j.1095-8649.2000.tb00748.x
Excoffier L, Smouse PE and Quattro JM (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
PMid:1644282 PMCid:1205020
Excoffier L, Laval G and Schneider S (2005). Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evol. Bioinform. Online 1: 47-50.
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Han HS, Nam BH, Kang JH, Kim YK, et al. (2012). Genetic variation in wild and cultured populations of the sea squirt Halocynthia roretzi inferred from microsatellite DNA analysis. Fish. Aquat. Sci. 15: 151-155.
Hara M and Sekino M (2005). Genetic difference between Ezo-awabi Haliotis discus hannai and Kuro-awabi H. discus discus populations: Microsatellite-based population analysis in Japanese abalone. Fish. Sci. 71: 754-766.
http://dx.doi.org/10.1111/j.1444-2906.2005.01025.x
Hara M and Sekino M (2007). Genetic differences between hatchery stocks and natural populations in Pacific abalone (Haliotis discus) estimated using microsatellite dNA markers. Mar. Biotechnol. 9: 74-81.
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Ichikawa H and Beardsley RC (2002). The current system in the Yellow and East China Seas. J. Oceanog. 58: 77-92.
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Karaiskou N, Triantafyllidis A, Katsares V, Abatzopoulos TJ, et al. (2009). Microsatellite variability of wild and farmed populations of Sparus aurata. J. Fish Biol. 74: 1816-1825.
http://dx.doi.org/10.1111/j.1095-8649.2009.02186.x
PMid:20735673
Kim M-J, An HS and Choi K-H (2010a). Genetic characteristics of Pacific cod populations in Korea based on microsatellite markers. Fish. Sci. 76: 595-603.
http://dx.doi.org/10.1007/s12562-010-0249-z
Kim W-J, Kim KK, Han HS, Nam BH, et al. (2010b). Population structure of the olive flounder (Paralichthys olivaceus) in Korea inferred from microsatellite marker analysis. J. Fish Biol. 76: 1958-1971.
http://dx.doi.org/10.1111/j.1095-8649.2010.02638.x
PMid:20557649
Li Q, Park C and Kijima A (2002). Isolation and characterization of microsatellite loci in the Pacific abalone, Haliotis discus hannai. J. Shellfish Res. 21: 811-815.
Li Q, Park C, Endo T and Kijima A (2004). Loss of genetic variation at microsatellite loci in hatchery strains of the Pacific abalone (Haliotis discus hannai). Aquaculture 235: 207-222.
http://dx.doi.org/10.1016/j.aquaculture.2003.12.018
Li Q, Shu J, Yu R and Tian C (2007). Genetic variability of cultured populations of the Pacific abalone (Haliotis discus hannai Ino) in China based on microsatellites. Aquacult. Res. 38: 981-990.
http://dx.doi.org/10.1111/j.1365-2109.2007.01764.x
Liu F, Xia JH, Bai ZY, Fu JJ, et al. (2009). High genetic diversity and substantial population differentiation in grass carp (Ctenopharyngodon idella) revealed by microsatellite analysis. Aquaculture 297: 51-56.
http://dx.doi.org/10.1016/j.aquaculture.2009.09.008
Marie AD, Bernatchez L and Garant D (2010). Loss of genetic integrity correlates with stocking intensity in brook charr (Salvelinus fontinalis). Mol. Ecol. 19: 2025-2037.
http://dx.doi.org/10.1111/j.1365-294X.2010.04628.x
PMid:20406382
Meier K, Hansen MM, Bekkevold D, Skaala Ø, et al. (2011). An assessment of the spatial scale of local adaptation in brown trout (Salmo trutta L.): footprints of selection at microsatellite DNA loci. Heredity 106: 488-499.
http://dx.doi.org/10.1038/hdy.2010.164
PMid:21224872 PMCid:3131969
Miller KJ, Maynard BT and Mundy CN (2009). Genetic diversity and gene flow in collapsed and healthy abalone fisheries. Mol. Ecol. 18: 200-211.
http://dx.doi.org/10.1111/j.1365-294X.2008.04019.x
PMid:19076275
Mjolnerod IB, Refseth UH, Karlsen E, Balstad T, et al. (1997). Genetic differences between two wild and one farmed population of Atlantic salmon (Salmo salar) revealed by three classes of genetic markers. Hereditas 127: 239-248.
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Norris AT, Bradley DG and Cunningham EP (1999). Microsatellite genetic variation between and within farmed and wild Atlantic salmon (Salmo salar) populations. Aquaculture 180: 247-264.
http://dx.doi.org/10.1016/S0044-8486(99)00212-4
Pritchard JK, Stephens M and Donnelly P (2000). Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
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Reiss H, Hoarau G, Dickey-Collas M and Wolff WJ (2009). Genetic population structure of marine fish: mismatch between biological and fisheries management units. Fish Fish. 10: 361-395.
http://dx.doi.org/10.1111/j.1467-2979.2008.00324.x
Rice WR (1989). Analyzing tables of statistical tests. Evolution 43: 223-225.
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Sekino M and Hara M (2001). Microsatellite loci in Pacific abalone, Haliotis discus discus (Mollusca, Gastropoda, Haliotidae). Mol. Ecol. Notes 1: 8-10.
http://dx.doi.org/10.1046/j.1471-8278.2000.00004.x
Sekino M, Saido T, Fujita T, Kobayashi T, et al. (2005). Microsatellite DNA markers of Ezo abalone (Haliotis discus hannai): A preliminary assessment of natural populations sampled from heavily stocked areas. Aquaculture 243: 33-47.
http://dx.doi.org/10.1016/j.aquaculture.2004.10.013
van Oosterhout C, Hutchinson WF, Wills DPM and Shipley P (2004). MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 4: 535-538.
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“Population genetic structure of wild and hatchery black rockfish Sebastes inermis in Korea, assessed using cross-species microsatellite markers”, vol. 10, pp. 2492-2504, 2011.
, Alarcón JA, Magoulas A, Georgakopoulos A and Zouros E (2004). Genetic comparison of wild and cultivated European populations of the gilthead sea bream (Sparus aurata). Aquaculture 230: 65-80.
http://dx.doi.org/10.1016/S0044-8486(03)00434-4
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An HY, Park JY, Kim MJ and Lee EY (2009). Isolation and characterization of microsatellite markers for the heavily exploited rockfish Sebastes schlegeli, and cross-species amplification in four related Sebastes spp. Conserv. Genet. 10: 1969-1972.
http://dx.doi.org/10.1007/s10592-009-9870-8
Buonaccorsi VP, Kimbrell CA, Lynn EA and Vetter RD (2002). Population structure of copper rockfish (Sebastes caurinus) reflects postglacial colonization and contemporary patterns of larval dispersal. Can. J. Fish. Aquat. Sci. 59: 1374-1384.
http://dx.doi.org/10.1139/f02-101
Buonaccorsi VP, Westerman M, Stannard J and Kimbrell C (2004). Molecular genetic structure suggests limited larval dispersal in grass rockfish, Sebastes rastrelliger. Mar. Biol. 145: 779-788.
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DeWoody JA and Avise JC (2000). Microsatellite variation in marine, freshwater and anadromous fishes compared with other animals. J. Fish Biol. 56: 461-473.
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Excoffier L, Smouse PE and Quattro JM (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
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Gilbert-Horvath EA, Larson RJ and Garza JC (2006). Temporal recruitment patterns and gene flow in kelp rockfish (Sebastes atrovirens). Mol. Ecol. 15: 3801-3815.
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Norris AT, Bradley DG and Cunningham EP (1999). Microsatellite genetic variation between and within farmed and wild Atlantic salmon (Salmo salar) populations. Aquaculture 180: 247-264.
http://dx.doi.org/10.1016/S0044-8486(99)00212-4
Reiss H, Hoarau G, Dickey-Collas M and Wolff WJ (2009). Genetic population structure of marine fish: mismatch between biological and fisheries management units. Fish Fish. 10: 361-395.
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Rice WR (1989). Analyzing tables of statistical tests. Evolution 43: 223-225.
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Sekino M, Hara M and Taniguchi N (2002). Loss of microsatellite and mitochondrial DNA variation in hatchery strains of Japanese flounder Paralichthys olivaceus. Aquaculture 213: 101-122.
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