Publications
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“Insight into gene evolution within Cervidae and Bovidae through genetic variation in MHC-DQA in the black muntjac (Muntiacus crinifrons)”, vol. 11, pp. 2888-2898, 2012.
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Amills M, Sulas C, Sanchez A, Bertoni G, et al. (2005). Nucleotide sequence and polymorphism of the caprine major histocompatibility complex class II DQA1 (Cahi-DQA1) gene. Mol. Immunol. 42: 375-379.
http://dx.doi.org/10.1016/j.molimm.2004.07.009
PMid:15589326
Amills M, Ramirez O, Tomas A, Obexer-Ruff G, et al. (2008). Positive selection on mammalian MHC-DQ genes revisited from a multispecies perspective. Genes Immun. 9: 651-658.
http://dx.doi.org/10.1038/gene.2008.62
PMid:18685643
Archie EA, Henry T, Maldonado JE, Moss CJ, et al. (2010). Major histocompatibility complex variation and evolution at a single, expressed DQA locus in two genera of elephants. Immunogenetics 62: 85-100.
http://dx.doi.org/10.1007/s00251-009-0413-8
PMid:20058003
Ballingall KT, Luyai A and McKeever DJ (1997). Analysis of genetic diversity at the DQA loci in African cattle: evidence for a BoLA-DQA3 locus. Immunogenetics 46: 237-244.
http://dx.doi.org/10.1007/s002510050268
PMid:9211751
Bergstrom T and Gyllensten U (1995). Evolution of Mhc class II polymorphism: the rise and fall of class II gene function in primates. Immunol. Rev. 143: 13-31.
http://dx.doi.org/10.1111/j.1600-065X.1995.tb00668.x
PMid:7558074
Bernatchez L and Landry C (2003). MHC studies in nonmodel vertebrates: what have we learned about natural selection in 15 years? J. Evol. Biol. 16: 363-377.
http://dx.doi.org/10.1046/j.1420-9101.2003.00531.x
PMid:14635837
Bryja J, Galan M, Charbonnel N and Cosson JF (2006). Duplication, balancing selection and trans-species evolution explain the high levels of polymorphism of the DQA MHC class II gene in voles (Arvicolinae). Immunogenetics 58: 191-202.
http://dx.doi.org/10.1007/s00251-006-0085-6
PMid:16467985
Chen YY, Zhang YY, Zhang HM, Ge YF, et al. (2010). Natural selection coupled with intragenic recombination shapes diversity patterns in the major histocompatibility complex class II genes of the giant panda. J. Exp. Zool. B. Mol. Dev. Evol. 314: 208-223.
Cutrera AP and Lacey EA (2006). Major histocompatibility complex variation in talas tuco-tucos: the influence of demography on selection. J. Mammal. 87: 706-716.
http://dx.doi.org/10.1644/05-MAMM-A-383R1.1
Geluk A, Elferink DG, Slierendregt BL, van Meijgaarden KE, et al. (1993). Evolutionary conservation of major histocompatibility complex-DR/peptide/T cell interactions in primates. J. Exp. Med. 177: 979-987.
http://dx.doi.org/10.1084/jem.177.4.979
PMid:8459225
Goüy de BJ, Suchentrunk F, Baird SJ and Schaschl H (2009). Evolutionary history of an MHC gene in two leporid species: characterisation of Mhc-DQA in the European brown hare and comparison with the European rabbit. Immunogenetics 61: 131-144.
http://dx.doi.org/10.1007/s00251-008-0349-4
PMid:19104797
Hassanin A and Douzery EJ (2003). Molecular and morphological phylogenies of ruminantia and the alternative position of the Moschidae. Syst. Biol. 52: 206-228.
http://dx.doi.org/10.1080/10635150390192726
PMid:12746147
Hickford JG, Ridgway HJ and Escayg AP (2000). Evolution of the ovine MHC DQA region. Anim. Genet. 31: 200-205.
http://dx.doi.org/10.1046/j.1365-2052.2000.00635.x
PMid:10895311
Hickford JG, Zhou H, Slow S and Fang Q (2004). Diversity of the ovine DQA2 gene. J. Anim. Sci. 82: 1553-1563.
PMid:15216980
Hughes AL and Yeager M (1998). Natural selection at major histocompatibility complex loci of vertebrates. Annu. Rev. Genet. 32: 415-435.
http://dx.doi.org/10.1146/annurev.genet.32.1.415
PMid:9928486
Jukes TH and Cantor CR (1969). Evolution of Protein Molecules. In: Mammalian Protein Metabolism (Munro HN, ed.). Academic Press, New York, 121-132.
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http://dx.doi.org/10.1016/0198-8859(87)90066-8
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http://dx.doi.org/10.1007/BF00204890
PMid:2329006
Kundu S and Faulkes CG (2004). Patterns of MHC selection in African mole-rats, family Bathyergidae: the effects of sociality and habitat. Proc. Biol. Sci. 271: 273-278.
http://dx.doi.org/10.1098/rspb.2003.2584
PMid:15058438 PMCid:1691588
Nei M and Gojobori T (1986). Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 3: 418-426.
PMid:3444411
Ni XW, Meng K, Wu HL and Zhu GP (2009). Genetic diversity of a captive population of black muntjac revealed by a set of high polymorphism across-species microsatellites. Anim. Biol. 59: 273-281.
http://dx.doi.org/10.1163/157075609X454908
Piertney SB and Olivier MK (2006). The evolutionary ecology of the major histocompatibility complex. Heredity 96: 7-21.
PMid:16094301
Reche PA and Reinherz EL (2003). Sequence variability analysis of human class I and class II MHC molecules: functional and structural correlates of amino acid polymorphisms. J. Mol. Biol. 331: 623-641.
http://dx.doi.org/10.1016/S0022-2836(03)00750-2
Rousset F (2008). Genepop'007: a complete re-implementation of the genepop software for Windows and Linux. Mol. Ecol. Resour. 8: 103-106.
http://dx.doi.org/10.1111/j.1471-8286.2007.01931.x
PMid:21585727
Schaschl H, Wandeler P, Suchentrunk F, Obexer-Ruff G, et al. (2006). Selection and recombination drive the evolution of MHC class II DRB diversity in ungulates. Heredity 97: 427-437.
http://dx.doi.org/10.1038/sj.hdy.6800892
PMid:16941019
Sheng HL (1987). The black muntjac - A species endemic to China. Chin. J. Zool. 22: 45-48.
Snibson KJ, Maddox JF, Fabb SA and Brandon MR (1998). Allelic variation of ovine MHC class II DQA1 and DQA2 genes. Anim. Genet. 29: 356-362.
http://dx.doi.org/10.1046/j.1365-2052.1998.295351.x
PMid:9800324
Spurgin LG and Richardson DS (2010). How pathogens drive genetic diversity: MHC, mechanisms and misunderstandings. Proc. Biol. Sci. 277: 979-988.
http://dx.doi.org/10.1098/rspb.2009.2084
PMid:20071384 PMCid:2842774
Surridge AK, van der Loo W, Abrantes J, Carneiro M, et al. (2008). Diversity and evolutionary history of the MHC DQA gene in leporids. Immunogenetics 60: 515-525.
http://dx.doi.org/10.1007/s00251-008-0309-z
PMid:18584169
Tamura K, Dudley J, Nei M and Kumar S (2007). MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24: 1596-1599.
http://dx.doi.org/10.1093/molbev/msm092
PMid:17488738
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, et al. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882.
http://dx.doi.org/10.1093/nar/25.24.4876
PMid:9396791 PMCid:147148
Traul DL, Bhushan B, Eldridge JA, Crawford TB, et al. (2005). Characterization of Bison bison major histocompatibility complex class IIa haplotypes. Immunogenetics 57: 845-854.
http://dx.doi.org/10.1007/s00251-005-0042-9
PMid:16331512
Van Den Bussche RA, Hoofer SR and Lochmiller RL (1999). Characterization of Mhc-DRB allelic diversity in white-tailed deer (Odocoileus virginianus) provides insight into Mhc-DRB allelic evolution within Cervidae. Immunogenetics 49: 429-437.
http://dx.doi.org/10.1007/s002510050516
PMid:10199919
Wan QH, Zhang P, Ni XW, Wu HL, et al. (2011). A novel HURRAH protocol reveals high numbers of monomorphic MHC class II loci and two asymmetric multi-locus haplotypes in the Pere David's deer. PLoS One 6: e14518.
http://dx.doi.org/10.1371/journal.pone.0014518
PMid:21267075 PMCid:3022581
Wang W and Lan H (2000). Rapid and parallel chromosomal number reductions in muntjac deer inferred from mitochondrial DNA phylogeny. Mol. Biol. Evol. 17: 1326-1333.
http://dx.doi.org/10.1093/oxfordjournals.molbev.a026416
PMid:10958849
Wu HL and Fang SG (2005). Mitochondrial DNA genetic diversity of black muntjac (Muntiacus crinifrons), an endangered species endemic to China. Biochem. Genet. 43: 407-416.
http://dx.doi.org/10.1007/s10528-005-6779-x
PMid:16187164
Yang F, O'Brien PC, Wienberg J and Ferguson-Smith MA (1997). Evolution of the black muntjac (Muntiacus crinifrons) karyotype revealed by comparative chromosome painting. Cytogenet. Cell Genet. 76: 159-163.
http://dx.doi.org/10.1159/000134535
PMid:9186510
Yang Z (2007). PAML 4: Phylogenetic Analysis by Maximum Likelihood. Mol. Biol. Evol. 24: 1586-1591.
http://dx.doi.org/10.1093/molbev/msm088
PMid:17483113
Zhou H and Hickford JG (2004). Allelic polymorphism in the ovine DQA1 gene. J. Anim. Sci. 82: 8-16.
PMid:14753344
Zhu FH, Yan JC, Luo TL, Yu J, et al. (2011). Polymorphism of MHC-DQA2 in black muntjac (Muntiacus crinifrons). Acta. Theriol. Sin. 31: 90-96.
“Isolation and characterization of 12 polymorphic microsatellite markers for the frog Pelophylax hubeiensis”, vol. 10. pp. 268-272, 2011.
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Austin JD, Davila JA, Lougheed SC and Boag PT (2003). Genetic evidence for female-biased dispersal in the bullfrog, Rana catesbeiana (Ranidae). Mol. Ecol. 12: 3165-3172.
http://dx.doi.org/10.1046/j.1365-294X.2003.01948.x
PMid:14629395
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http://dx.doi.org/10.1098/rspb.2005.3329
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Dai JH and Zhou KY (2009). Development of microsatellite loci for Pelophylax plancyi and cross-amplification in other ranid species. Conserv. Genet. 10: 763-766.
http://dx.doi.org/10.1007/s10592-008-9657-3
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http://dx.doi.org/10.1038/nature01969
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http://dx.doi.org/10.1186/1471-2148-10-201
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Sambrook J and Russell DW (2001). Molecular Cloning. 3rd edn. Cold Spring Harbor Laboratory Press, New York.
Uller T and Olsson M (2008). Multiple paternity in reptiles: patterns and processes. Mol. Ecol. 17: 2566-2580.
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van Oosterhout C, Hutchinson WF, Wills DPM and Shipley P (2004). Micro-checker: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 4: 535-538.
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“Isolation and characterization of polymorphic microsatellite loci in Aleurodicus dispersus (Hemiptera, Aleyrodidae)”, vol. 10. pp. 2523-2526, 2011.
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Bloor P, Barker FS, Watts PC and Noyes HA (2001). Microsatellite Libraries by Enrichment. School of Biological Sciences, University of Liverpool, Liverpool.
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Han DY, Liu K, Chen W and Fan ZW (2008). Distribution and host plants of spiralling whitefly, Aleurodicus dispersus, in Hainan. Chin. Bull. Entomol. 45: 583-588.
Marshall TC, Slate J, Kruuk LE and Pemberton JM (1998). Statistical confidence for likelihood-based paternity inference in natural populations. Mol. Ecol. 7: 639-655.
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Raymond M and Rousset F (1995). GENEPOP (version 1.2): population genetics software for exact tests and ecumenicism. J. Hered. 86: 248-249.
Russell LM (1965). A new species of Aleurodicus Douglas and two close relatives (Homoptera: Aleyrodidae). Florida Entomol. 48: 47-55.
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van Oosterhout C, Hutchinson W, Wills D and Shipley P (2004). MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes 4: 535-538.
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