Publications
Found 14 results
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“Decreased TIM-3 mRNA expression in peripheral blood mononuclear cells from nephropathy patients”, vol. 14, pp. 6543-6548, 2015.
, “In vivo determination of muscle-derived stem cells in rat corpus cavernosum”, vol. 14, pp. 9951-9962, 2015.
, “Lack of association between the vitamin D receptor polymorphism rs2228570 and chronic periodontitis in a Han Chinese population”, vol. 14, pp. 12299-12305, 2015.
, “Methylation analysis of CXCR1 in mammary gland tissue of cows with mastitis induced by Staphylococcus aureus”, vol. 14, pp. 12606-12615, 2015.
, , “Correlation between MTP -493G>T polymorphism and non-alcoholic fatty liver disease risk: a meta-analysis”, vol. 13, pp. 10150-10161, 2014.
, “Different magnitude of resistance to non-depolarizing muscle relaxants in dexamethasone-treated rat diaphragm associated with altered acetylcholine receptor expression”, vol. 13, pp. 5892-5900, 2014.
, “Expression and diagnostic value of proteins in Mycobacterium tuberculosis”, vol. 13, pp. 7780-7790, 2014.
, “Expression and serological diagnosis of Mycobacterium tuberculosis CFP-10 and Rv2626c proteins”, vol. 13, pp. 7398-7406, 2014.
, “Long-term effects of evodiamine on expressions of lipogenesis and lipolysis genes in mouse adipose and liver tissues”, vol. 13, pp. 1038-1046, 2014.
, “One "8"-shaped scleral suture to treat rhegmatogenous retinal detachment: a refined procedure of minimal scleral buckling”, vol. 13, pp. 6665-6671, 2014.
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“An improved protocol and a new grinding device for extraction of genomic DNA from microorganisms by a two-step extraction procedure”, vol. 11. pp. 1532-1543, 2012.
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Al-Samarrai TH and Schmid J (2000). A simple method for extraction of fungal genomic DNA. Lett. Appl. Microbiol. 30: 53-56.
http://dx.doi.org/10.1046/j.1472-765x.2000.00664.x
PMid:10728561
Astegiano S, Sidoti F, Costa C, Ostorero A, et al. (2010). Human cytomegalovirus load in fresh and glycerolized skin grafts. New Microbiol. 33: 253-256.
PMid:20954444
Chi MH, Park SY and Lee YH (2009). A quick and safe method for fungal DNA extraction. Plant Pathol. J. 25: 108-111.
http://dx.doi.org/10.5423/PPJ.2009.25.1.108
Clark-Curtiss JE, Jacobs WR, Docherty MA, Ritchie LR, et al. (1985). Molecular analysis of DNA and construction of genomic libraries of Mycobacterium leprae. J. Bacteriol. 161: 1093-1102.
PMid:3882664 PMCid:215012
Deden H, Deufel A, Eisel D and Grünewald-Janho S (2006). PCR Applications Manual. 3rd edn. Roche Diagnostics GmbH, Mannheim.
Fredricks DN and Relman DA (1998). Improved amplification of microbial DNA from blood cultures by removal of the PCR inhibitor sodium polyanetholesulfonate. J. Clin. Microbiol. 36: 2810-2816.
PMid:9738025 PMCid:105069
Griffiths LJ, Anyim M, Doffman SR, Wilks M, et al. (2006). Comparison of DNA extraction methods for Aspergillus fumigatus using real-time PCR. J. Med. Microbiol. 55: 1187-1191.
http://dx.doi.org/10.1099/jmm.0.46510-0
PMid:16914647
Harju S, Fedosyuk H and Peterson KR (2004). Rapid isolation of yeast genomic DNA: Bust n' Grab. BMC Biotechnol. 4: 8.
http://dx.doi.org/10.1186/1472-6750-4-8
PMid:15102338 PMCid:406510
Karakousis A, Tan L, Ellis D, Alexiou H, et al. (2006). An assessment of the efficiency of fungal DNA extraction methods for maximizing the detection of medically important fungi using PCR. J. Microbiol. Methods 65: 38-48.
http://dx.doi.org/10.1016/j.mimet.2005.06.008
PMid:16099520
Kuske CR, Banton KL, Adorada DL, Stark PC, et al. (1998). Small-scale DNA sample preparation method for field PCR detection of microbial cells and spores in soil. Appl. Environ. Microbiol. 64: 2463-2472.
PMid:9647816 PMCid:106412
Liu KH, Yeh YL and Shen WC (2011). Fast preparation of fungal DNA for PCR screening. J. Microbiol. Methods 85: 170-172.
http://dx.doi.org/10.1016/j.mimet.2011.01.029
PMid:21315113
Maarit NR, Heiskanen I, Wallenius K and Lindstrom K (2001). Extraction and purification of DNA in rhizosphere soil samples for PCR-DGGE analysis of bacterial consortia. J. Microbiol. Methods 45: 155-165.
http://dx.doi.org/10.1016/S0167-7012(01)00253-6
Melo SC, Pungartnik C, Cascardo JC and Brendel M (2006). Rapid and efficient protocol for DNA extraction and molecular identification of the basidiomycete Crinipellis perniciosa. Genet. Mol. Res. 5: 851-855.
PMid:17183493
Moslem MA, Bahkali AH, Abd-Elsalam KA and Wit PJ (2010). An efficient method for DNA extraction from Cladosporioid fungi. Genet. Mol. Res. 9: 2283-2291.
http://dx.doi.org/10.4238/vol9-4gmr936
PMid:21128208
Müller FM, Werner KE, Kasai M, Francesconi A, et al. (1998). Rapid extraction of genomic DNA from medically important yeasts and filamentous fungi by high-speed cell disruption. J. Clin. Microbiol. 36: 1625-1629.
PMid:9620390 PMCid:104890
Niwa T, Kawamura Y, Katagiri Y and Ezaki T (2005). Lytic enzyme, labiase for a broad range of Gram-positive bacteria and its application to analyze functional DNA/RNA. J. Microbiol. Methods 61: 251-260.
http://dx.doi.org/10.1016/j.mimet.2004.12.006
PMid:15722152
Okada H, Tada K, Sekiya T, Yokoyama K, et al. (1998). Molecular characterization and heterologous expression of the gene encoding a low-molecular-mass endoglucanase from Trichoderma reesei QM9414. Appl. Environ. Microbiol. 64: 555-563.
PMid:9464393 PMCid:106082
Rajagopalan G and Krishnan C (2008). Alpha-amylase production from catabolite derepressed Bacillus subtilis KCC103 utilizing sugarcane bagasse hydrolysate. Bioresour. Technol. 99: 3044-3050.
http://dx.doi.org/10.1016/j.biortech.2007.06.001
PMid:17644331
Sambrook J and Russell DW (2001). Molecular Cloning: A Laboratory Manual. 3rd edn. Cold Spring Harbor, New York.
Tendulkar SR, Gupta A and Chattoo BB (2003). A simple protocol for isolation of fungal DNA. Biotechnol. Lett. 25: 1941-1944.
http://dx.doi.org/10.1023/B:BILE.0000003990.27624.04
PMid:14719830
Tong AH and Boone C (2006). Synthetic genetic array analysis in Saccharomyces cerevisiae. Methods Mol. Biol. 313: 171-192.
PMid:16118434
Waites MJ, Morgan NL, Rockey JS and Higton G (2001). Industrial Microbiology: An Introduction. Blackwell Science, London, 16-34.
Yamamoto Y, Kohno S, Koga H, Kakeya H, et al. (1995). Random amplified polymorphic DNA analysis of clinically and environmentally isolated Cryptococcus neoformans in Nagasaki. J. Clin. Microbiol. 33: 3328-3332.
PMid:8586730 PMCid:228701
Zhang YJ, Zhang S, Liu XZ, Wen HA, et al. (2010). A simple method of genomic DNA extraction suitable for analysis of bulk fungal strains. Lett. Appl. Microbiol. 51: 114-118.
PMid:20536704
“Lack of an association between -308G>A polymorphism of the TNF-α gene and liver cirrhosis risk based on a meta-analysis”, vol. 10, pp. 2765-2774, 2011.
, Bahr MJ, el Menuawy M, Boeker KH, Musholt PB, et al. (2003). Cytokine gene polymorphisms and the susceptibility to liver cirrhosis in patients with chronic hepatitis C. Liver Int. 23: 420-425.
http://dx.doi.org/10.1111/j.1478-3231.2003.00873.x
PMid:14986816
Bataller R, North KE and Brenner DA (2003). Genetic polymorphisms and the progression of liver fibrosis: a critical appraisal. Hepatology 37: 493-503.
http://dx.doi.org/10.1053/jhep.2003.50127
PMid:12601343
Cha C and Dematteo RP (2005). Molecular mechanisms in hepatocellular carcinoma development. Best Pract. Res. Clin. Gastroenterol. 19: 25-37.
http://dx.doi.org/10.1016/j.bpg.2004.11.005
Chan HL, Tse AM, Chim AM, Wong VW, et al. (2008). Association of cytokine gene polymorphisms and liver fibrosis in chronic hepatitis B. J. Gastroenterol. Hepatol. 23: 783-789.
http://dx.doi.org/10.1111/j.1440-1746.2007.05110.x
PMid:17645476
Chen YQ, Lin JS, Tian DY and Liang KH (2003). Study on the association between the promoter polymorphism of TNF gene and cirrhosis. World J. Infect. 3: 186-190.
Choi J and Ou JH (2006). Mechanisms of liver injury. III. Oxidative stress in the pathogenesis of hepatitis C virus. Am. J. Physiol. Gastrointest. Liver Physiol. 290: G847-G851.
http://dx.doi.org/10.1152/ajpgi.00522.2005
PMid:16603728
Chuang E, Del Vecchio A, Smolinski S, Song XY, et al. (2004). Biomedicines to reduce inflammation but not viral load in chronic HCV-what’s the sense? Trends Biotechnol. 22: 517-523.
http://dx.doi.org/10.1016/j.tibtech.2004.08.011
PMid:15450745
Commins SP, Borish L and Steinke JW (2010). Immunologic messenger molecules: cytokines, interferons, and chemokines. J. Allergy Clin. Immunol. 125: S53-S72.
http://dx.doi.org/10.1016/j.jaci.2009.07.008
PMid:19932918
Constantini PK, Wawrzynowicz-Syczewska M, Clare M, Boron-Kaczmarska A, et al. (2002). Interleukin-1, interleukin-10 and tumour necrosis factor-alpha gene polymorphisms in hepatitis C virus infection: an investigation of the relationships with spontaneous viral clearance and response to alpha-interferon therapy. Liver 22: 404-412.
http://dx.doi.org/10.1034/j.1600-0676.2002.01553.x
Cua IH, Hui JM, Bandara P, Kench JG, et al. (2007). Insulin resistance and liver injury in hepatitis C is not associated with virus-specific changes in adipocytokines. Hepatology 46: 66-73.
http://dx.doi.org/10.1002/hep.21703
PMid:17596870
Cuenca J, Perez CA, Aguirre AJ, Schiattino I, et al. (2001). Genetic polymorphism at position-308 in the promoter region of the tumor necrosis factor (TNF): implications of its allelic distribution on susceptibility or resistance to diseases in the Chilean population. Biol. Res. 34: 237-241.
http://dx.doi.org/10.4067/S0716-97602001000300011
PMid:11715861
Elsammak M, Refai W, Elsawaf A, Abdel-Fattah I, et al. (2005). Elevated serum tumor necrosis factor alpha and ferritin may contribute to the insulin resistance found in HCV positive Egyptian patients. Curr. Med. Res. Opin. 21: 527-534.
http://dx.doi.org/10.1185/030079905X38141
PMid:15899101
Falasca K, Ucciferri C, Dalessandro M, Zingariello P, et al. (2006). Cytokine patterns correlate with liver damage in patients with chronic hepatitis B and C. Ann. Clin. Lab. Sci. 36: 144-150.
PMid:16682509
Fan LY, Zhong RQ, Tu XQ, Pfeiffer T, et al. (2004). Genetic association of tumor necrosis factor (TNF)-alpha polymorphisms with primary biliary cirrhosis and autoimmune liver diseases in a Chinese population. Zhonghua Gan Zang Bing Za Zhi 12: 160-162.
PMid:15059302
Friedman SL (2010). Evolving challenges in hepatic fibrosis. Nat. Rev. Gastroenterol. Hepatol. 7: 425-436.
http://dx.doi.org/10.1038/nrgastro.2010.97
Gordon MA, Oppenheim E, Camp NJ, di Giovine FS, et al. (1999). Primary biliary cirrhosis shows association with genetic polymorphism of tumour necrosis factor alpha promoter region. J. Hepatol. 31: 242-247.
http://dx.doi.org/10.1016/S0168-8278(99)80220-7
Hajeer AH and Hutchinson IV (2000). TNF-alpha gene polymorphism: clinical and biological implications. Microsc. Res. Tech. 50: 216-228.
http://dx.doi.org/10.1002/1097-0029(20000801)50:3<216::AID-JEMT5>3.0.CO;2-Q
Hajeer AH and Hutchinson IV (2001). Influence of TNFalpha gene polymorphisms on TNFalpha production and disease. Hum. Immunol. 62: 1191-1199.
http://dx.doi.org/10.1016/S0198-8859(01)00322-6
Higgins JP and Thompson SG (2002). Quantifying heterogeneity in a meta-analysis. Stat. Med. 21: 1539-1558.
http://dx.doi.org/10.1002/sim.1186
PMid:12111919
Jeng JE, Tsai JF, Chuang LY, Ho MS, et al. (2007). Tumor necrosis factor-alpha 308.2 polymorphism is associated with advanced hepatic fibrosis and higher risk for hepatocellular carcinoma. Neoplasia 9: 987-992.
http://dx.doi.org/10.1593/neo.07781
PMid:18030367
Jiang ZL, Zhang W, Zhang H and Liu YB (2009). Relationship between TNF-alpha, TGF-beta1 and IL-10 genetic polymorphisms and post- hepatitis B cirrhosis. Shi Jie Hua Ren Xiao Hua 17: 3263-3268.
Jones DE, Watt FE, Grove J, Newton JL, et al. (1999). Tumour necrosis factor-alpha promoter polymorphisms in primary biliary cirrhosis. J. Hepatol. 30: 232-236.
http://dx.doi.org/10.1016/S0168-8278(99)80067-1
Juran BD, Atkinson EJ, Larson JJ, Schlicht EM, et al. (2010). Carriage of a tumor necrosis factor polymorphism amplifies the cytotoxic T-lymphocyte antigen 4 attributed risk of primary biliary cirrhosis: evidence for a gene-gene interaction. Hepatology 52: 223-229.
http://dx.doi.org/10.1002/hep.23667
PMid:20578265 PMCid:2922843
Kamal SM, Turner B, He Q, Rasenack J, et al. (2006). Progression of fibrosis in hepatitis C with and without schistosomiasis: correlation with serum markers of fibrosis. Hepatology 43: 771-779.
http://dx.doi.org/10.1002/hep.21117
PMid:16557547
Li Y, Chang M, Abar O, Garcia V, et al. (2009). Multiple variants in toll-like receptor 4 gene modulate risk of liver fibrosis in Caucasians with chronic hepatitis C infection. J. Hepatol. 51: 750-757.
http://dx.doi.org/10.1016/j.jhep.2009.04.027
PMid:19586676 PMCid:2883297
Lim YS and Kim WR (2008). The global impact of hepatic fibrosis and end-stage liver disease. Clin. Liver Dis. 12: 733- 46, vii.
http://dx.doi.org/10.1016/j.cld.2008.07.007
PMid:18984463
Mallat A, Hezode C and Lotersztajn S (2008). Environmental factors as disease accelerators during chronic hepatitis C. J. Hepatol. 48: 657-665.
http://dx.doi.org/10.1016/j.jhep.2008.01.004
PMid:18279998
Nguyen-Khac E, Houchi H, Daoust M, Dupas JL, et al. (2008). The -308 TNFalpha gene polymorphism in severe acute alcoholic hepatitis: identification of a new susceptibility marker. Alcohol. Clin. Exp. Res. 32: 822-828.
http://dx.doi.org/10.1111/j.1530-0277.2008.00629.x
PMid:18336639
Niro GA, Poli F, Andriulli A, Bianchi I, et al. (2009). TNF-alpha polymorphisms in primary biliary cirrhosis: a northern and southern Italian experience. Ann. N. Y. Acad. Sci. 1173: 557-563.
http://dx.doi.org/10.1111/j.1749-6632.2009.04741.x
PMid:19758199
Oo YH, Hubscher SG and Adams DH (2010). Autoimmune hepatitis: new paradigms in the pathogenesis, diagnosis, and management. Hepatol. Int. 4: 475-493.
http://dx.doi.org/10.1007/s12072-010-9183-5
PMid:20827405 PMCid:2900560
Pastor IJ, Laso FJ, Romero A and Gonzalez-Sarmiento R (2005). -238 G>A polymorphism of tumor necrosis factor alpha gene (TNFA) is associated with alcoholic liver cirrhosis in alcoholic Spanish men. Alcohol. Clin. Exp. Res. 29: 1928-1931.
http://dx.doi.org/10.1097/01.alc.0000187595.19324.ca
Peters JL, Sutton AJ, Jones DR, Abrams KR, et al. (2006). Comparison of two methods to detect publication bias in meta-analysis. JAMA 295: 676-680.
http://dx.doi.org/10.1001/jama.295.6.676
PMid:16467236
Poynard T, Mathurin P, Lai CL, Guyader D, et al. (2003). A comparison of fibrosis progression in chronic liver diseases. J. Hepatol. 38: 257-265.
http://dx.doi.org/10.1016/S0168-8278(02)00413-0
Schwabe RF and Brenner DA (2006). Mechanisms of Liver Injury. I. TNF-alpha-induced liver injury: role of IKK, JNK, and ROS pathways. Am. J. Physiol. Gastrointest. Liver Physiol. 290: G583-G589.
http://dx.doi.org/10.1152/ajpgi.00422.2005
PMid:16537970
Tahara T, Shibata T, Nakamura M, Yamashita H, et al. (2009). Effect of polymorphisms in the 3’ untranslated region (3’- UTR) of vascular endothelial growth factor gene on gastric cancer and peptic ulcer diseases in Japan. Mol. Carcinog. 48: 1030-1037.
http://dx.doi.org/10.1002/mc.20554
PMid:19496079
Tanaka A, Quaranta S, Mattalia A, Coppel R, et al. (1999). The tumor necrosis factor-alpha promoter correlates with progression of primary biliary cirrhosis. J. Hepatol. 30: 826-829.
http://dx.doi.org/10.1016/S0168-8278(99)80135-4
Thimme R, Wieland S, Steiger C, Ghrayeb J, et al. (2003). CD8+ T cells mediate viral clearance and disease pathogenesis during acute hepatitis B virus infection. J. Virol. 77: 68-76.
http://dx.doi.org/10.1128/JVI.77.1.68-76.2003
PMid:12477811 PMCid:140637
Vandenbroucke JP, von Elm E, Altman DG, Gotzsche PC, et al. (2007). Strengthening the Reporting of Observational Studies in Epidemiology (STROBE): explanation and elaboration. Epidemiology 18: 805-835.
http://dx.doi.org/10.1097/EDE.0b013e3181577511
PMid:18049195
Wilson AG, di Giovine FS, Blakemore AI and Duff GW (1992). Single base polymorphism in the human tumour necrosis factor alpha (TNF-alpha) gene detectable by NcoI restriction of PCR product. Hum. Mol. Genet. 1: 353.
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Zintzaras E and Ioannidis JP (2005). Heterogeneity testing in meta-analysis of genome searches. Genet. Epidemiol. 28: 123-137.
http://dx.doi.org/10.1002/gepi.20048
PMid:15593093