Publications

Found 14 results
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2015
X. Z. Cai, Liu, N., Qiao, Y., Du, S. Y., Chen, Y., Chen, D., Yu, S., and Jiang, Y., “Decreased TIM-3 mRNA expression in peripheral blood mononuclear cells from nephropathy patients”, vol. 14, pp. 6543-6548, 2015.
L. J. Xu, Xue, B. X., Shan, Y. X., Chen, D., Gao, J., Yang, D. R., Sun, C. Y., and Cui, Y., “In vivo determination of muscle-derived stem cells in rat corpus cavernosum”, vol. 14, pp. 9951-9962, 2015.
X. Wang, Zhang, T. L., and Chen, D., “Lack of association between the vitamin D receptor polymorphism rs2228570 and chronic periodontitis in a Han Chinese population”, vol. 14, pp. 12299-12305, 2015.
Y. J. Mao, Zhu, X. R., Li, R., Chen, D., Xin, S. Y., Zhu, Y. H., Liao, X. X., Wang, X. L., Zhang, H. M., Yang, Z. P., and Yang, L. G., “Methylation analysis of CXCR1 in mammary gland tissue of cows with mastitis induced by Staphylococcus aureus”, vol. 14, pp. 12606-12615, 2015.
D. Chen, Li, Y., Guo, F., Lu, Z., Hei, C., Li, P., and Jin, Q., “Protective effect of p38 MAPK inhibitor on wear debris-induced inflammatory osteolysis through downregulating RANK/RANKL in a mouse model”, vol. 14, pp. 40-52, 2015.
2014
L. Li, Wang, S. J., Shi, K., Chen, D., Jia, H., and Zhu, J., “Correlation between MTP -493G>T polymorphism and non-alcoholic fatty liver disease risk: a meta-analysis”, vol. 13, pp. 10150-10161, 2014.
D. Chen, Yang, M. R., Huang, L. N., Qiu, Y. W., and Li, S. T., “Different magnitude of resistance to non-depolarizing muscle relaxants in dexamethasone-treated rat diaphragm associated with altered acetylcholine receptor expression”, vol. 13, pp. 5892-5900, 2014.
Z. Y. Zhu, Liu, Y., Wang, H. B., Xiao, J. Z., Qiu, Y. F., Yan, L., Chen, D., Liu, A. G., and Yang, X., “Expression and diagnostic value of proteins in Mycobacterium tuberculosis”, vol. 13, pp. 7780-7790, 2014.
Z. Y. Zhu, Zhang, D., Wang, H. B., Xiao, J. Z., Qiu, Y. F., Yan, L., Chen, D., Liu, A. G., and Yang, X., “Expression and serological diagnosis of Mycobacterium tuberculosis CFP-10 and Rv2626c proteins”, vol. 13, pp. 7398-7406, 2014.
D. F. Jiang, Li, W. T., Yang, H. L., Zhang, Z. Z., Chen, D., and Sun, C., “Long-term effects of evodiamine on expressions of lipogenesis and lipolysis genes in mouse adipose and liver tissues”, vol. 13, pp. 1038-1046, 2014.
H. Y. Min, Chen, D., Chen, Y., and Dong, F. T., “One "8"-shaped scleral suture to treat rhegmatogenous retinal detachment: a refined procedure of minimal scleral buckling”, vol. 13, pp. 6665-6671, 2014.
2013
Z. He, Zhu, H., Ding, L., Xiao, H., Chen, D., and Xue, F., “Association of NPP1 polymorphism with postoperative progression of ossification of the posterior longitudinal ligament in Chinese patients”, vol. 12, pp. 4648-4655, 2013.
2012
S. S. Zhang, Chen, D., and Lu, Q., “An improved protocol and a new grinding device for extraction of genomic DNA from microorganisms by a two-step extraction procedure”, vol. 11. pp. 1532-1543, 2012.
Al-Samarrai TH and Schmid J (2000). A simple method for extraction of fungal genomic DNA. Lett. Appl. Microbiol. 30: 53-56. http://dx.doi.org/10.1046/j.1472-765x.2000.00664.x PMid:10728561   Astegiano S, Sidoti F, Costa C, Ostorero A, et al. (2010). Human cytomegalovirus load in fresh and glycerolized skin grafts. New Microbiol. 33: 253-256. PMid:20954444   Chi MH, Park SY and Lee YH (2009). A quick and safe method for fungal DNA extraction. Plant Pathol. J. 25: 108-111. http://dx.doi.org/10.5423/PPJ.2009.25.1.108   Clark-Curtiss JE, Jacobs WR, Docherty MA, Ritchie LR, et al. (1985). Molecular analysis of DNA and construction of genomic libraries of Mycobacterium leprae. J. Bacteriol. 161: 1093-1102. PMid:3882664 PMCid:215012   Deden H, Deufel A, Eisel D and Grünewald-Janho S (2006). PCR Applications Manual. 3rd edn. Roche Diagnostics GmbH, Mannheim.   Fredricks DN and Relman DA (1998). Improved amplification of microbial DNA from blood cultures by removal of the PCR inhibitor sodium polyanetholesulfonate. J. Clin. Microbiol. 36: 2810-2816. PMid:9738025 PMCid:105069   Griffiths LJ, Anyim M, Doffman SR, Wilks M, et al. (2006). Comparison of DNA extraction methods for Aspergillus fumigatus using real-time PCR. J. Med. Microbiol. 55: 1187-1191. http://dx.doi.org/10.1099/jmm.0.46510-0 PMid:16914647   Harju S, Fedosyuk H and Peterson KR (2004). Rapid isolation of yeast genomic DNA: Bust n' Grab. BMC Biotechnol. 4: 8. http://dx.doi.org/10.1186/1472-6750-4-8 PMid:15102338 PMCid:406510   Karakousis A, Tan L, Ellis D, Alexiou H, et al. (2006). An assessment of the efficiency of fungal DNA extraction methods for maximizing the detection of medically important fungi using PCR. J. Microbiol. Methods 65: 38-48. http://dx.doi.org/10.1016/j.mimet.2005.06.008 PMid:16099520   Kuske CR, Banton KL, Adorada DL, Stark PC, et al. (1998). Small-scale DNA sample preparation method for field PCR detection of microbial cells and spores in soil. Appl. Environ. Microbiol. 64: 2463-2472. PMid:9647816 PMCid:106412   Liu KH, Yeh YL and Shen WC (2011). Fast preparation of fungal DNA for PCR screening. J. Microbiol. Methods 85: 170-172. http://dx.doi.org/10.1016/j.mimet.2011.01.029 PMid:21315113   Maarit NR, Heiskanen I, Wallenius K and Lindstrom K (2001). Extraction and purification of DNA in rhizosphere soil samples for PCR-DGGE analysis of bacterial consortia. J. Microbiol. Methods 45: 155-165. http://dx.doi.org/10.1016/S0167-7012(01)00253-6   Melo SC, Pungartnik C, Cascardo JC and Brendel M (2006). Rapid and efficient protocol for DNA extraction and molecular identification of the basidiomycete Crinipellis perniciosa. Genet. Mol. Res. 5: 851-855. PMid:17183493   Moslem MA, Bahkali AH, Abd-Elsalam KA and Wit PJ (2010). An efficient method for DNA extraction from Cladosporioid fungi. Genet. Mol. Res. 9: 2283-2291. http://dx.doi.org/10.4238/vol9-4gmr936 PMid:21128208   Müller FM, Werner KE, Kasai M, Francesconi A, et al. (1998). Rapid extraction of genomic DNA from medically important yeasts and filamentous fungi by high-speed cell disruption. J. Clin. Microbiol. 36: 1625-1629. PMid:9620390 PMCid:104890   Niwa T, Kawamura Y, Katagiri Y and Ezaki T (2005). Lytic enzyme, labiase for a broad range of Gram-positive bacteria and its application to analyze functional DNA/RNA. J. Microbiol. Methods 61: 251-260. http://dx.doi.org/10.1016/j.mimet.2004.12.006 PMid:15722152   Okada H, Tada K, Sekiya T, Yokoyama K, et al. (1998). Molecular characterization and heterologous expression of the gene encoding a low-molecular-mass endoglucanase from Trichoderma reesei QM9414. Appl. Environ. Microbiol. 64: 555-563. PMid:9464393 PMCid:106082   Rajagopalan G and Krishnan C (2008). Alpha-amylase production from catabolite derepressed Bacillus subtilis KCC103 utilizing sugarcane bagasse hydrolysate. Bioresour. Technol. 99: 3044-3050. http://dx.doi.org/10.1016/j.biortech.2007.06.001 PMid:17644331   Sambrook J and Russell DW (2001). Molecular Cloning: A Laboratory Manual. 3rd edn. Cold Spring Harbor, New York.   Tendulkar SR, Gupta A and Chattoo BB (2003). A simple protocol for isolation of fungal DNA. Biotechnol. Lett. 25: 1941-1944. http://dx.doi.org/10.1023/B:BILE.0000003990.27624.04 PMid:14719830   Tong AH and Boone C (2006). Synthetic genetic array analysis in Saccharomyces cerevisiae. Methods Mol. Biol. 313: 171-192. PMid:16118434   Waites MJ, Morgan NL, Rockey JS and Higton G (2001). Industrial Microbiology: An Introduction. Blackwell Science, London, 16-34.   Yamamoto Y, Kohno S, Koga H, Kakeya H, et al. (1995). Random amplified polymorphic DNA analysis of clinically and environmentally isolated Cryptococcus neoformans in Nagasaki. J. Clin. Microbiol. 33: 3328-3332. PMid:8586730 PMCid:228701   Zhang YJ, Zhang S, Liu XZ, Wen HA, et al. (2010). A simple method of genomic DNA extraction suitable for analysis of bulk fungal strains. Lett. Appl. Microbiol. 51: 114-118. PMid:20536704
2011
D. Chen, Liu, J. L., Liu, Y., Zhu, J., and Wang, S. W., “Lack of an association between -308G>A polymorphism of the TNF-α gene and liver cirrhosis risk based on a meta-analysis”, vol. 10, pp. 2765-2774, 2011.
Bahr MJ, el Menuawy M, Boeker KH, Musholt PB, et al. (2003). Cytokine gene polymorphisms and the susceptibility to liver cirrhosis in patients with chronic hepatitis C. Liver Int. 23: 420-425. http://dx.doi.org/10.1111/j.1478-3231.2003.00873.x PMid:14986816 Bataller R, North KE and Brenner DA (2003). Genetic polymorphisms and the progression of liver fibrosis: a critical appraisal. Hepatology 37: 493-503. http://dx.doi.org/10.1053/jhep.2003.50127 PMid:12601343 Cha C and Dematteo RP (2005). Molecular mechanisms in hepatocellular carcinoma development. Best Pract. Res. Clin. Gastroenterol. 19: 25-37. http://dx.doi.org/10.1016/j.bpg.2004.11.005 Chan HL, Tse AM, Chim AM, Wong VW, et al. (2008). Association of cytokine gene polymorphisms and liver fibrosis in chronic hepatitis B. J. Gastroenterol. Hepatol. 23: 783-789. http://dx.doi.org/10.1111/j.1440-1746.2007.05110.x PMid:17645476 Chen YQ, Lin JS, Tian DY and Liang KH (2003). Study on the association between the promoter polymorphism of TNF gene and cirrhosis. World J. Infect. 3: 186-190. Choi J and Ou JH (2006). Mechanisms of liver injury. III. Oxidative stress in the pathogenesis of hepatitis C virus. Am. J. Physiol. Gastrointest. Liver Physiol. 290: G847-G851. http://dx.doi.org/10.1152/ajpgi.00522.2005 PMid:16603728 Chuang E, Del Vecchio A, Smolinski S, Song XY, et al. (2004). Biomedicines to reduce inflammation but not viral load in chronic HCV-what’s the sense? Trends Biotechnol. 22: 517-523. http://dx.doi.org/10.1016/j.tibtech.2004.08.011 PMid:15450745 Commins SP, Borish L and Steinke JW (2010). Immunologic messenger molecules: cytokines, interferons, and chemokines. J. Allergy Clin. Immunol. 125: S53-S72. http://dx.doi.org/10.1016/j.jaci.2009.07.008 PMid:19932918 Constantini PK, Wawrzynowicz-Syczewska M, Clare M, Boron-Kaczmarska A, et al. (2002). Interleukin-1, interleukin-10 and tumour necrosis factor-alpha gene polymorphisms in hepatitis C virus infection: an investigation of the relationships with spontaneous viral clearance and response to alpha-interferon therapy. Liver 22: 404-412. http://dx.doi.org/10.1034/j.1600-0676.2002.01553.x Cua IH, Hui JM, Bandara P, Kench JG, et al. (2007). Insulin resistance and liver injury in hepatitis C is not associated with virus-specific changes in adipocytokines. Hepatology 46: 66-73. http://dx.doi.org/10.1002/hep.21703 PMid:17596870 Cuenca J, Perez CA, Aguirre AJ, Schiattino I, et al. (2001). Genetic polymorphism at position-308 in the promoter region of the tumor necrosis factor (TNF): implications of its allelic distribution on susceptibility or resistance to diseases in the Chilean population. Biol. Res. 34: 237-241. http://dx.doi.org/10.4067/S0716-97602001000300011 PMid:11715861 Elsammak M, Refai W, Elsawaf A, Abdel-Fattah I, et al. (2005). Elevated serum tumor necrosis factor alpha and ferritin may contribute to the insulin resistance found in HCV positive Egyptian patients. Curr. Med. Res. Opin. 21: 527-534. http://dx.doi.org/10.1185/030079905X38141 PMid:15899101 Falasca K, Ucciferri C, Dalessandro M, Zingariello P, et al. (2006). Cytokine patterns correlate with liver damage in patients with chronic hepatitis B and C. Ann. Clin. Lab. Sci. 36: 144-150. PMid:16682509 Fan LY, Zhong RQ, Tu XQ, Pfeiffer T, et al. (2004). Genetic association of tumor necrosis factor (TNF)-alpha polymorphisms with primary biliary cirrhosis and autoimmune liver diseases in a Chinese population. Zhonghua Gan Zang Bing Za Zhi 12: 160-162. PMid:15059302 Friedman SL (2010). Evolving challenges in hepatic fibrosis. Nat. Rev. Gastroenterol. Hepatol. 7: 425-436. http://dx.doi.org/10.1038/nrgastro.2010.97 Gordon MA, Oppenheim E, Camp NJ, di Giovine FS, et al. (1999). Primary biliary cirrhosis shows association with genetic polymorphism of tumour necrosis factor alpha promoter region. J. Hepatol. 31: 242-247. http://dx.doi.org/10.1016/S0168-8278(99)80220-7 Hajeer AH and Hutchinson IV (2000). TNF-alpha gene polymorphism: clinical and biological implications. Microsc. Res. Tech. 50: 216-228. http://dx.doi.org/10.1002/1097-0029(20000801)50:3<216::AID-JEMT5>3.0.CO;2-Q Hajeer AH and Hutchinson IV (2001). Influence of TNFalpha gene polymorphisms on TNFalpha production and disease. Hum. Immunol. 62: 1191-1199. http://dx.doi.org/10.1016/S0198-8859(01)00322-6 Higgins JP and Thompson SG (2002). Quantifying heterogeneity in a meta-analysis. Stat. Med. 21: 1539-1558. http://dx.doi.org/10.1002/sim.1186 PMid:12111919 Jeng JE, Tsai JF, Chuang LY, Ho MS, et al. (2007). Tumor necrosis factor-alpha 308.2 polymorphism is associated with advanced hepatic fibrosis and higher risk for hepatocellular carcinoma. Neoplasia 9: 987-992. http://dx.doi.org/10.1593/neo.07781 PMid:18030367 Jiang ZL, Zhang W, Zhang H and Liu YB (2009). Relationship between TNF-alpha, TGF-beta1 and IL-10 genetic polymorphisms and post- hepatitis B cirrhosis. Shi Jie Hua Ren Xiao Hua 17: 3263-3268. Jones DE, Watt FE, Grove J, Newton JL, et al. (1999). Tumour necrosis factor-alpha promoter polymorphisms in primary biliary cirrhosis. J. Hepatol. 30: 232-236. http://dx.doi.org/10.1016/S0168-8278(99)80067-1 Juran BD, Atkinson EJ, Larson JJ, Schlicht EM, et al. (2010). Carriage of a tumor necrosis factor polymorphism amplifies the cytotoxic T-lymphocyte antigen 4 attributed risk of primary biliary cirrhosis: evidence for a gene-gene interaction. Hepatology 52: 223-229. http://dx.doi.org/10.1002/hep.23667 PMid:20578265    PMCid:2922843 Kamal SM, Turner B, He Q, Rasenack J, et al. (2006). Progression of fibrosis in hepatitis C with and without schistosomiasis: correlation with serum markers of fibrosis. Hepatology 43: 771-779. http://dx.doi.org/10.1002/hep.21117 PMid:16557547 Li Y, Chang M, Abar O, Garcia V, et al. (2009). Multiple variants in toll-like receptor 4 gene modulate risk of liver fibrosis in Caucasians with chronic hepatitis C infection. J. Hepatol. 51: 750-757. http://dx.doi.org/10.1016/j.jhep.2009.04.027 PMid:19586676    PMCid:2883297 Lim YS and Kim WR (2008). The global impact of hepatic fibrosis and end-stage liver disease. Clin. Liver Dis. 12: 733- 46, vii. http://dx.doi.org/10.1016/j.cld.2008.07.007 PMid:18984463 Mallat A, Hezode C and Lotersztajn S (2008). Environmental factors as disease accelerators during chronic hepatitis C. J. Hepatol. 48: 657-665. http://dx.doi.org/10.1016/j.jhep.2008.01.004 PMid:18279998 Nguyen-Khac E, Houchi H, Daoust M, Dupas JL, et al. (2008). The -308 TNFalpha gene polymorphism in severe acute alcoholic hepatitis: identification of a new susceptibility marker. Alcohol. Clin. Exp. Res. 32: 822-828. http://dx.doi.org/10.1111/j.1530-0277.2008.00629.x PMid:18336639 Niro GA, Poli F, Andriulli A, Bianchi I, et al. (2009). TNF-alpha polymorphisms in primary biliary cirrhosis: a northern and southern Italian experience. Ann. N. Y. Acad. Sci. 1173: 557-563. http://dx.doi.org/10.1111/j.1749-6632.2009.04741.x PMid:19758199 Oo YH, Hubscher SG and Adams DH (2010). Autoimmune hepatitis: new paradigms in the pathogenesis, diagnosis, and management. Hepatol. Int. 4: 475-493. http://dx.doi.org/10.1007/s12072-010-9183-5 PMid:20827405    PMCid:2900560 Pastor IJ, Laso FJ, Romero A and Gonzalez-Sarmiento R (2005). -238 G>A polymorphism of tumor necrosis factor alpha gene (TNFA) is associated with alcoholic liver cirrhosis in alcoholic Spanish men. Alcohol. Clin. Exp. Res. 29: 1928-1931. http://dx.doi.org/10.1097/01.alc.0000187595.19324.ca Peters JL, Sutton AJ, Jones DR, Abrams KR, et al. (2006). Comparison of two methods to detect publication bias in meta-analysis. JAMA 295: 676-680. http://dx.doi.org/10.1001/jama.295.6.676 PMid:16467236 Poynard T, Mathurin P, Lai CL, Guyader D, et al. (2003). A comparison of fibrosis progression in chronic liver diseases. J. Hepatol. 38: 257-265. http://dx.doi.org/10.1016/S0168-8278(02)00413-0 Schwabe RF and Brenner DA (2006). Mechanisms of Liver Injury. I. TNF-alpha-induced liver injury: role of IKK, JNK, and ROS pathways. Am. J. Physiol. Gastrointest. Liver Physiol. 290: G583-G589. http://dx.doi.org/10.1152/ajpgi.00422.2005 PMid:16537970 Tahara T, Shibata T, Nakamura M, Yamashita H, et al. (2009). Effect of polymorphisms in the 3’ untranslated region (3’- UTR) of vascular endothelial growth factor gene on gastric cancer and peptic ulcer diseases in Japan. Mol. Carcinog. 48: 1030-1037. http://dx.doi.org/10.1002/mc.20554 PMid:19496079 Tanaka A, Quaranta S, Mattalia A, Coppel R, et al. (1999). The tumor necrosis factor-alpha promoter correlates with progression of primary biliary cirrhosis. J. 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