Publications

Brown AHD and Weir BS (1983). Measuring Genetic Variability in Plant Populations. In: Isozymes in Plant Genetics and Breeding (Tanskley SD and Orton TJ, eds.). Part A. Elsevier, Amsterdam, 219-229. Brummer EC (1999). Capturing heterosis in forage crop cultivar development. Crop Sci. 39: 943-954. http://dx.doi.org/10.2135/cropsci1999.0011183X003900040001x Casler MD, Stendal CA, Kapich L and Vogel KP (2007). Genetic diversity, plant adaptation regions, and gene pools for switchgrass. Crop Sci. 47: 2261-2273. http://dx.doi.org/10.2135/cropsci2006.12.0797 Cortese LM, Honig J, Miller C and Bonos SA (2010). Genetic diversity of twelve switchgrass populations using molecular and morphological markers. Bioenerg. Res. 3: 262-271. http://dx.doi.org/10.1007/s12155-010-9078-2 Gunter LE, Tuskan GA and Wullschleger SD (1996). Diversity among populations of switchgrass based on RAPD markers. Crop Sci. 36: 1017-1022. http://dx.doi.org/10.2135/cropsci1996.0011183X003600040034x Hartl DL and Clark AG (1997). Principles of Population Genetics. Sinauer, Sunderland. Hitchcock AS (1935). Manual of the Grasses of the United States. USDA Miscellaneous, U.S. Government Printing Office, Washington. Hopkins AA, Taliaferro CM, Murphy CD and Christian D (1996). Chromosome number and nuclear DNA content of several switchgrass populations. Crop Sci. 36: 1192-1195. http://dx.doi.org/10.2135/cropsci1996.0011183X003600050021x Kumar S, Nei M, Dudley J and Tamura K (2008). MEGA: a biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief. Bioinform. 9: 299-306. http://dx.doi.org/10.1093/bib/bbn017 PMid:18417537    PMCid:2562624 Lynch M and Milligan BG (1994). Analysis of population genetic structure with RAPD markers. Mol. Ecol. 3: 91-99. http://dx.doi.org/10.1111/j.1365-294X.1994.tb00109.x PMid:8019690 Martinez-Reyna JM and Vogel KP (2008). Heterosis in switchgrass spaced plants. Crop Sci. 48: 1312-1320. http://dx.doi.org/10.2135/cropsci2007.12.0695 Martinez-Reyna JM, Vogel KP, Caha C and Lee DJ (2001). Meiotic stability, chloroplast DNA polymorphisms, and morphological traits of upland x lowland switchgrass reciprocal hybrids. Crop Sci. 41: 1579-1583. http://dx.doi.org/10.2135/cropsci2001.4151579x McLaughlin SB and Kszos LA (2005). Development of switchgrass (Panicum virgatum) as a bioenergy feedstock in the United States. Biomass Bioenerg. 28: 515-535. http://dx.doi.org/10.1016/j.biombioe.2004.05.006 McLaughlin SB, Bouton J, Bransby D, Conger B, et al. (1999). Progress in Developing Switchgrass as a Bioenergy Feedstock. In: Perspectives on New Crops and New Uses (Janick J, ed.). ASHS Press, Alexandria, 282-298. Meudt HM and Clarke AC (2006). Almost forgotten or latest practice? AFLP applications, analyses and advances. Trends Plant Sci. 12: 1360-1385. Missaoui AM, Paterson AH and Bouton JH (2006). Molecular markers for the classification of switchgrass (Panicum virgatum L.) germplasm and to assess genetic diversity in three synthetic switchgrass populations. Genet. Res. Crop Evol. 53: 1291-1302. http://dx.doi.org/10.1007/s10722-005-3878-9 Modliszewski JL, Thomas DT, Fan C, Crawford DJ, et al. (2006). Ancestral chloroplast polymorphism and historical secondary contact in a broad hybrid zone of Aesculus (Sapindaceae). Am. J. Bot. 93: 377-388. http://dx.doi.org/10.3732/ajb.93.3.377 PMid:21646198 Mohammadi SA and Prasanna BM (2003). Analysis of genetic diversity in crop plants-salient statistical tools and considerations. Crop Sci. 43: 1235-1248. http://dx.doi.org/10.2135/cropsci2003.1235 Narasimhamoorthy B, Saha M, Swaller T and Bouton J (2008). Genetic diversity in switchgrass collections assessed by EST-SSR markers. Bioenerg. Res. 1: 136-146. http://dx.doi.org/10.1007/s12155-008-9011-0 Palmer PG (1975). A biosystematic study of the Panicum amarum-P. amarulum complex (Gramineae). Brittonia 27: 142-150. http://dx.doi.org/10.2307/2805475 Peakall R and Smouse PE (2006). GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol. Ecol. Notes 6: 288-295. http://dx.doi.org/10.1111/j.1471-8286.2005.01155.x Pirie MD, Vargas MPB, Botermans M, Bakker FT, et al. (2007). Ancient paralogy in the cpDNA trnL-F region in Annonaceae: implications for plant molecular systematics. Am. J. Bot. 94: 1003-1016. http://dx.doi.org/10.3732/ajb.94.6.1003 PMid:21636470 Rohlf FJ (1993). NTSYS-pc. Numerical Taxonomical and Multivariate Analysis System. Exeter Software, Setauket, New York. Selbo SM and Snow AA (2005). Flowering phenology and genetic similarity among local and recently introduced populations of Andropogon gerardii in Ohio. Restor. Ecol. 13: 441-447. http://dx.doi.org/10.1111/j.1526-100X.2005.00055.x Singh A, Negi MS, Rajagopal J, Bhatia S, et al. (1999). Assessment of genetic diversity in Azadirachta indica using AFLP markers. Theor. Appl. Genet. 99: 272-279. http://dx.doi.org/10.1007/s001220051232 Taberlet P, Gielly L, Pautou G and Bouvet J (1991). Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Mol. Biol. 17: 1105-1109. http://dx.doi.org/10.1007/BF00037152 PMid:1932684 Vogel KP (2004). Switchgrass. In: Warm-season (C4) grasses (Moser LE, Sollenberger L and Burson B, eds.). Agronomy Monograph, Madison, 561-588. Vos P, Hogers R, Bleeker M, Reijans M, et al. (1995). AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 23: 4407-4414. http://dx.doi.org/10.1093/nar/23.21.4407 PMid:7501463    PMCid:307397 Waller SS and Lewis JK (1979). Occurrence of C3 and C4 photosynthetic pathways of North American grasses. J. Range Manage. 32: 12-28. http://dx.doi.org/10.2307/3897378 Wang Z, Kenworthy KE and Wu Y (2010). Genetic diversity of common carpetgrass revealed by amplified fragment length polymorphism markers. Crop Sci. 50: 1366-1374. http://dx.doi.org/10.2135/cropsci2009.08.0472 Wolfe AD and Elisens WJ (1995). Evidence of chloroplast capture and pollen-mediated gene flow in Penstemon sect. Peltanthera (Scrophulariaceae). Syst. Bot. 20: 395-412. http://dx.doi.org/10.2307/2419800 Wu YQ, Taliaferro CM, Bai GH and Anderson MP (2005). Genetic diversity of Cynodon transvaalensis Burtt-Davy and its relatedness to hexaploid C. dactylon (L.) Pers. as indicated by AFLP markers. Crop Sci. 45: 848-853. http://dx.doi.org/10.2135/cropsci2003.913 Zalapa JE, Price DL, Kaeppler SM, Tobias CM, et al. (2010). Hierarchical classification of switchgrass genotypes using SSR and chloroplast sequences: ecotypes, ploidies, gene pools, and cultivars. Theor. Appl. Genet. 122: 805-817. http://dx.doi.org/10.1007/s00122-010-1488-1 PMid:21104398