Publications

Aarts MG, te Lintel HB, Holub EB, Beynon JL, et al. (1998). Identification of R-gene homologous DNA fragments genetically linked to disease resistance loci in Arabidopsis thaliana. Mol. Plant Microbe Interact. 11: 251-258. http://dx.doi.org/10.1094/MPMI.1998.11.4.251 PMid:9530866 Agrios GN (1997). Plant Pathology. 4th edn. Academic Press, New York. Altschul SF, Madden TL, Schaffer AA, Zhang J, et al. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402. http://dx.doi.org/10.1093/nar/25.17.3389 PMid:9254694    PMCid:146917 Anderson PA, Lawrence GJ, Morrish BC, Ayliffe MA, et al. (1997). Inactivation of the flax rust resistance gene M associated with loss of a repeated unit within the leucine-rich repeat coding region. Plant Cell 9: 641-651. PMid:9144966    PMCid:156945 Bai J, Pennill LA, Ning J, Lee SW, et al. (2002). Diversity in nucleotide binding site-leucine-rich repeat genes in cereals. Genome Res. 12: 1871-1884. http://dx.doi.org/10.1101/gr.454902 PMid:12466291    PMCid:187567 Bailey TL and Elkan C (1994). Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proc. Int. Conf. Intell. Syst. Mol. Biol. 2: 28-36. PMid:7584402 Bent AF, Kunkel BN, Dahlbeck D, Brown KL, et al. (1994). RPS2 of Arabidopsis thaliana: a leucine-rich repeat class of plant disease resistance genes. Science 265: 1856-1860. http://dx.doi.org/10.1126/science.8091210 PMid:8091210 Carlier J, Fouré E, Gauhl F and Jones DR (2000). Fungal Diseases of the Foliage. In: Diseases of Banana Abacá and Enset (Jones DR, ed.). CABI Publishing, Wallingford, 37-141. Dixon MS, Jones DA, Keddie JS, Thomas CM, et al. (1996). The tomato Cf-2 disease resistance locus comprises two functional genes encoding leucine-rich repeat proteins. Cell 84: 451-459. http://dx.doi.org/10.1016/S0092-8674(00)81290-8 Eddy SR (2007). HMMER: Profile Hidden Markov Models for Biological Sequence Analysis. Available at [http://hmmer.janelia.org]. Accessed March 15, 2010. FAO (2005). (Food and Agricultural Organization). Available at [http://www.fao.org/lim500/nphwrap.pi?productioncrops. primary&Domain=SUA&]. Accessed December 3, 2009. Feuillet C, Schachermayr G and Keller B (1997). Molecular cloning of a new receptor-like kinase gene encoded at the Lr10 disease resistance locus of wheat. Plant J. 11: 45-52. http://dx.doi.org/10.1046/j.1365-313X.1997.11010045.x PMid:9025301 Grant MR, Godiard L, Straube E, Ashfield T, et al. (1995). Structure of the Arabidopsis RPM1 gene enabling dual specificity disease resistance. Science 269: 843-846. http://dx.doi.org/10.1126/science.7638602 PMid:7638602 Jeong SC, Hayes AJ, Biyashev RM and Saghai MMA (2001). Diversity and evolution of a non-TIR-NBS sequence family that clusters to a chromosomal “hotspot” for disease resistance genes in soybean. Theor. Appl. Genet. 103: 406-414. http://dx.doi.org/10.1007/s001220100567 Jones DA, Thomas CM, Hammond-Kosack KE, Balint-Kurti PJ, et al. (1994). Isolation of the tomato Cf-9 gene for resistance to Cladosporium fulvum by transposon tagging. Science 266: 789-793. http://dx.doi.org/10.1126/science.7973631 PMid:7973631 Jones DR (2000). Introduction of Banana. In: Diseases of Banana, Abacá and Enset (Jones DR, ed.). CABI Publishing, Wallingford, 1-36. Joshi RK, Mohanty S, Subudhi E and Nayak S (2010). Isolation and characterization of NBS-LRR- resistance gene candidates in turmeric (Curcuma longa cv. surama). Genet. Mol. Res. 9: 1796-1806. http://dx.doi.org/10.4238/vol9-3gmr910 PMid:20830672 Lawrence GJ, Finnegan EJ, Ayliffe MA and Ellis JG (1995). The L6 gene for flax rust resistance is related to the Arabidopsis bacterial resistance gene RPS2 and the tobacco viral resistance gene N. Plant Cell 7: 1195-1206. PMid:7549479    PMCid:160944 Leister D, Kurth J, Laurie DA, Yano M, et al. (1999). RFLP- and physical mapping of resistance gene homologues in rice (O. sative) and Barley (H. vulgare). Theor. Appl. Genet. 98: 509-520. http://dx.doi.org/10.1007/s001220051099 Marín DH, Romero RA, Guzmán M and Sutton TB (2003). Black sigatoka: an increasing threat to banana cultivation. Plant Disease 87: 208-222. http://dx.doi.org/10.1094/PDIS.2003.87.3.208 Martín GB, Brommonschenkel SH, Chunwongse J, Frary A, et al. (1993). Map-based cloning of a protein kinase gene conferring disease resistance in tomato. Science 262: 1432-1436. http://dx.doi.org/10.1126/science.7902614 PMid:7902614 Meyers BC, Dickerman AW, Michelmore RW, Sivaramakrishnan S, et al. (1999). Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily. Plant J. 20: 317-332. http://dx.doi.org/10.1046/j.1365-313X.1999.t01-1-00606.x PMid:10571892 Meyers BC, Morgante M and Michelmore RW (2002). TIR-X and TIR-NBS proteins: two new families related to disease resistance TIR-NBS-LRR proteins encoded in Arabidopsis and other plant genomes. Plant J. 32: 77-92. http://dx.doi.org/10.1046/j.1365-313X.2002.01404.x PMid:12366802 Michelmore R (2000). Genomic approaches to plant disease resistance. Curr. Opin. Plant Biol. 3: 125-131. http://dx.doi.org/10.1016/S1369-5266(99)00050-3 Michelmore RW and Meyers BC (1998). Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process. Genome Res. 8: 1113-1130. PMid:9847076 Noel L, Moores TL, van Der Biezen EA, Parniske M, et al. (1999). Pronounced intraspecific haplotype divergence at the RPP5 complex disease resistance locus of Arabidopsis. Plant Cell 11: 2099-2112. PMid:10559437    PMCid:144120 Ori N, Eshed Y, Paran I, Presting G, et al. (1997). The I2C family from the wilt disease resistance locus I2 belongs to the nucleotide binding, leucine-rich repeat superfamily of plant resistance genes. Plant Cell 9: 521-532. PMid:9144960    PMCid:156936 Page RD (1996). TreeView: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12: 357-358. PMid:8902363 Pan Q, Wendel J and Fluhr R (2000). Divergent evolution of plant NBS-LRR resistance gene homologues in dicot and cereal genomes. J. Mol. Evol. 50: 203-213. PMid:10754062 Pei X, Li S, Jiang Y, Zhang Y, et al. (2007). Isolation, characterization and phylogenetic analysis of the resistance gene analogues (RGAs) in banana (Musa spp.). Plant Sci. 172: 1166-1174. http://dx.doi.org/10.1016/j.plantsci.2007.02.019 Penuela S, Danesh D and Young ND (2002). Targeted isolation, sequence analysis, and physical mapping of nonTIR NBS-LRR genes in soybean. Theor. Appl. Genet. 104: 261-272. http://dx.doi.org/10.1007/s00122-001-0785-0 Peraza-Echeverria S, James-Kay A, Canto-Canche B and Castillo-Castro E (2007). Structural and phylogenetic analysis of Pto-type disease resistance gene candidates in banana. Mol. Genet. Genom. 278: 443-453. http://dx.doi.org/10.1007/s00438-007-0262-9 PMid:17587056 Robert NGM, David JB, Franc CB, Candice MRS, et al. (2008). Analysis of non-TIR NBS-LRR resistance gene analogs in Musa acaminata Colla: isolation, RFLP marker development, and physical mapping. BMC Plant Biol. 8: 15. http://dx.doi.org/10.1186/1471-2229-8-15 PMid:18234103    PMCid:2262081 Saitou N and Nei M (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425. PMid:3447015 Salmeron JM, Oldroyd GE, Rommens CM, Scofield SR, et al. (1996). Tomato Prf is a member of the leucine-rich repeat class of plant disease resistance genes and lies embedded within the Pto kinase gene cluster. Cell 86: 123-133. http://dx.doi.org/10.1016/S0092-8674(00)80083-5 Sambrook J and Russell DW (2001). Molecular Cloning: A Laboratory Manual. 3rd edn. Cold Spring Harbor, USA, Cold Spring Harbor Laboratory, New York. SanMiguel P, Tikhonov A, Jin YK, Motchoulskaia N, et al. (1996). Nested retrotransposons in the intergenic regions of the maize genome. Science 274: 765-768. http://dx.doi.org/10.1126/science.274.5288.765 PMid:8864112 Song WY, Wang GL, Chen LL, Kim HS, et al. (1995). A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21. Science 270: 1804-1806. http://dx.doi.org/10.1126/science.270.5243.1804 PMid:8525370 Staden R (1996). The Staden sequence analysis package. Mol. Biotechnol. 5: 233-241. http://dx.doi.org/10.1007/BF02900361 PMid:8837029 Tai TH, Dahlbeck D, Clark ET, Gajiwala P, et al. (1999). Expression of the Bs2 pepper gene confers resistance to bacterial spot disease in tomato. Proc. Natl. Acad. Sci. U. S. A. 96: 14153-14158. http://dx.doi.org/10.1073/pnas.96.24.14153 Thevissen K, Cammue BP, Lemaire K, Winderickx J, et al. (2000). A gene encoding a sphingolipid biosynthesis enzyme determines the sensitivity of Saccharomyces cerevisiae to an antifungal plant defensin from dahlia (Dahlia merckii). Proc. Natl. Acad. Sci. U. S. A. 97: 9531-9536. http://dx.doi.org/10.1073/pnas.160077797 PMid:10931938 van Der Biezen EA and Jones JD (1998). The NB-ARC domain: a novel signalling motif shared by plant resistance gene products and regulators of cell death in animals. Curr. Biol. 8: R226-R227. http://dx.doi.org/10.1016/S0960-9822(98)70145-9 Wang ZX, Yano M, Yamanouchi U, Iwamoto M, et al. (1999). The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes. Plant J. 19: 55-64. http://dx.doi.org/10.1046/j.1365-313X.1999.00498.x PMid:10417726 Whitham S, Dinesh-Kumar SP, Choi D, Hehl R, et al. (1994). The product of the tobacco mosaic virus resistance gene N: similarity to toll and the interleukin-1 receptor. Cell 78: 1101-1115. http://dx.doi.org/10.1016/0092-8674(94)90283-6 Wiame L, Swennen R and Sági L (2000). PCR-based cloning of candidate disease resistance genes from banana (Musa acuminata). Acta Hortic. 521: 51-57. Xie YB, Tang DZ, Zhang YS and Li WM (1998). Isolation of homologous sequences of R gene from rice. Chin. Sci. Bull. 43: 277-281. Yamanashi Y, Okada M, Semba T, Yamori T, et al. (1993). Identification of HS1 protein as a major substrate of protein-tyrosine kinase(s) upon B-cell antigen receptor-mediated signaling. Proc. Natl. Acad. Sci. U. S. A. 90: 3631-3635. http://dx.doi.org/10.1073/pnas.90.8.3631 Yoshimura S, Yamanouchi U, Katayose Y, Toki S, et al. (1998). Expression of Xa1, a bacterial blight-resistance gene in rice, is induced by bacterial inoculation. Proc. Natl. Acad. Sci. 95: 1663-1668. http://dx.doi.org/10.1073/pnas.95.4.1663