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2013
L. A. Rodrigues, Ruas, E. A., Signori, N. C., Costa, B. F., Farias-Missão, D. C. L., Vieira, B. G., Conson, A. R. O., Chaves, C. L., Delfini, J., Ruas, C. F., and Ruas, P. M., Isolation and characterization of 8 microsatellite loci from Chrysophyllum gonocarpum (Sapotaceae), vol. 12, pp. 416-419, 2013.
Billotte N, Lagoda PJR, Risterucci AM and Baurens FC (1999). Microsatellite-enriched libraries: applied methodology for the development of SSR markers in tropical crops. Fruits 54: 277-288.   Doyle JJ and Doyle JL (1987). A rapid DNA isolation for small quantities 161 of leaf tissue. Phytochem. Bull. 19: 11-15.   Excoffier L, Laval G and Schneider S (2005). Arlequin (version 3.0): An integrated software package for population genetics data analysis. Evol. Bioinform. Online 1: 47-50. PMCid:2658868   Litt M and Luty JA (1989). A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. Am. J. Hum. Genet. 44: 397-401. PMid:2563634 PMCid:1715430   Lorenzi H (2002). Árvores Brasileiras: Manual de Identificação e Cultivo de Plantas Arbóreas Nativas do Brasil. 2ª ed. Plantarum, Nova Odessa.   Marshall TC, Slate J, Kruuk L and Pemberton JM (1998). Statistical confidence for likelihood-based paternity inference in natural populations. Mol. Ecol. 7: 639-655. http://dx.doi.org/10.1046/j.1365-294x.1998.00374.x PMid:9633105   Reitz PR (1968). Sapotaceas. Itajaí: Herbário Barbosa Rodrigues, Flora Ilustrada Catarinense. Parte I: As Plantas. 72.   Rozen S and Skaletsky HJ (2000). PRIMER 3 on the WWW for General Users and for Biologist Programmers. In: Bioinformatics Methods and Protocols: Methods in Molecular Biology (Krawetz S and Misener S, eds.). Humana Press, Totowa, New Jersey.
F. G. Fiorin, Ruas, P. M., Ortiz, M. A., Urtubey, E., Matzenbacher, N. I., and Ruas, C. F., Karyotype studies on populations of two Hypochaeris species (H. catharinensis and H. lutea), Asteraceae, endemics to southern Brazil, vol. 12, pp. 1849-1858, 2013.
2012
B. F. Costa, Rodrigues, L. A., Ruas, E. A., Souza, L. B., Ruas, C. F., Vieira, B. G., Conson, A. R. O., and Ruas, P. M., Characterization of nine microsatellite loci for the tree species Parapiptadenia rigida, vol. 11. pp. 2338-2342, 2012.
Billotte N, Lagoda PJR, Risterucci AM and Baurens FC (1999). Microsatellite-enriched libraries: applied methodology for the development of SSR markers in tropical crops. Fruits 54: 277-288.   Doyle JJ and Doyle JL (1987). A rapid DNA isolation for small quantities 161 of leaf tissue. Phytochem. Bull. 19: 11-15.   Durigan G and Nogueira JCB (1990). Recomposição de Matas Ciliares. Instituto Florestal, São Paulo.   Edwards KJ, Barker JH, Daly A, Jones C, et al. (1996). Microsatellite libraries enriched for several microsatellite sequences in plants. Biotechniques 20: 758-760. PMid:8723911   Franco IJ and Fontana VL (1997). Ervas & Plantas: A Medicina dos Simples. Imprimax, Erechim.   Kageyama PY (1992). Recomposição da Vegetação com Espécies Arbóreas Nativas em Reservatórios de Usinas Hidrelétricas da CESP. Série Técnica IPEF, São Paulo.   Lorenzi H (2002). Árvores Brasileiras: Manual de Identificação e Cultivo de Plantas Arbóreas Nativas do Brasil. 2ª ed. Plantarum, Nova Odessa.   Marshall TC, Slate J, Kruuk LE and Pemberton JM (1998). Statistical confidence for likelihood-based paternity inference in natural populations. Mol. Ecol. 7: 639-655. http://dx.doi.org/10.1046/j.1365-294x.1998.00374.x PMid:9633105   Peters MB, Hagen C, Trapnell DW, Hamrick JL, et al. (2008). Isolation and characterization of microsatellite loci in the Guanacaste tree, Enterolobium cyclocarpum. Mol. Ecol. Resour. 8: 129-131. http://dx.doi.org/10.1111/j.1471-8286.2007.01896.x PMid:21585735   Raymond M and Rousset F (1995). Genepop (version 1.2): population genetics software for exact tests and ecumenicism. J. Hered. 86: 248-249.   Ribas LA (1999). Variabilidade Isoenzimática e Sistema de Cruzamento de Parapiptadenia rigida em um Pomar de Sementes. Doctoral thesis, Universidade Federal de Viçosa, Viçosa.   Rozen S and Skaletsky HJ (2000). PRIMER 3 on the WWW for General Users and for Biologist Programmers. In: Bioinformatics Methods and Protocols: Methods in Molecular Biology (Krawetz S and Misener S, eds.). Humana Press, Totowa.   Vaccaro S, Longhi SJ and Brena DA (1999). Aspectos da composição florística e categorias sucessionais do estrato arbóreo de três subseres de uma floresta estacional decidual, no município de Santa Tereza (RS). Rev. Ciênc. Florestal 9: 1-18.   Ware D, Jaiswal P, Ni J, Pan X, et al. (2002). Gramene: a resource for comparative grass genomics. Nucleic Acids Res. 30: 103-105. http://dx.doi.org/10.1093/nar/30.1.103 PMid:11752266 PMCid:99157
2011
E. A. Ruas, Ruas, C. F., Medri, P. S., Medri, C., Medri, M. E., Bianchini, E., Pimenta, J. A., Rodrigues, L. A., and Ruas, P. M., Anatomy and genetic diversity of two populations of Schinus terebinthifolius (Anacardiaceae) from the Tibagi River basin in Paraná, Brazil, vol. 10, pp. 526-536, 2011.
Armstrong W (1980). Aeration in higher plants. Adv. Bot. Res. 7: 225-332. http://dx.doi.org/10.1016/S0065-2296(08)60089-0   Armstrong W, Brändle R and Jackson MB (1994). Mechanisms of flood tolerance in plants. Acta. Bot. Neer. 43: 307-358.   Batista CUN, Medri ME, Bianchini E, Medri C, et al. (2008). Flood tolerance in Cecropia pachystachya Trec. (Cecropiaceae): ecophysiological and morpho-anatomical aspects. Acta Bot. Bras. 22: 91-98. http://dx.doi.org/10.1590/S0102-33062008000100012   Bianchini E, Medri ME, Pimenta JA, Giloni PC, et al. (2000). Anatomical alterations in plants of Chorisia speciosa A. St.- Hill. submitted to flooding. Interciencia 25: 436-411.   Blom CWPM, Voesenek LACJ, Banga M, Engelaar WMHG, et al. (1994). Physiological ecology of riverside species: adaptive responses of plants to submergence. Ann. Bot. 74: 253-263. http://dx.doi.org/10.1006/anbo.1994.1116   Bradford KJ and Yang SF (1980). Stress-induced ethylene production in the ethylene-requiring tomato mutant diageotropica. Plant Physiol. 65: 327-330. http://dx.doi.org/10.1104/pp.65.2.327 PMid:16661183 PMCid:440320   Carvalho MCCG, Da Silva DCG, Ruas PM, Medri ME, et al. (2008). Flooding tolerance and genetic diversity in populations of Luehea divaricata. Biol. Plantarum 54: 771-774. http://dx.doi.org/10.1007/s10535-008-0150-0   Chen H, Qualls RG and Miller GC (2002). Adaptive responses of Lepidium latifolium to soil flooding: biomass allocation, adventitious rooting, aerenchyma formation and ethylene production. Environ. Exp. Bot. 48: 119-128. http://dx.doi.org/10.1016/S0098-8472(02)00018-7   Coelho ASG (2000). Dboot: Avaliação dos Erros Associados a Estimativas de Distâncias/Similaridades Genéticas Através do Procedimento de Bootstrap com Número Variável de Marcadores (Software). Universidade Federal de Goiás, Instituto de Ciências Biológicas, Laboratório de Genética Vegetal, Goiânia.   Crawford RMM (1992). Oxygen availability as an ecological limit to plant distribution. Adv. Ecol. Res. 23: 93-185. http://dx.doi.org/10.1016/S0065-2504(08)60147-6   Crawford RMM and Braendle R (1996). Oxygen deprivation stress in a changing environment. J. Exp. Bot. 47: 145-159. http://dx.doi.org/10.1093/jxb/47.2.145   Davanso-Fabro VM, Medri ME, Bianchini E and Pimenta JA (1998). Tolerância à inundação: aspectos da anatomia ecológica e do desenvolvimento de Sesbania virgata (Cav.) Pers. (Fabaceae). Braz. Arch. Biol. Technol. 41: 475-482. http://dx.doi.org/10.1590/S1516-89131998000400012   Doyle JJ and Doyle JL (1987). A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytoch. Bull. 19: 11-15.   Ferreira ME and Grattapaglia D (1996). Introdução ao Uso de Marcadores Moleculares em Análise Genética. 2nd edn. Embrapa-Cenargen, Brasília.   Gillies AC, Navarro C, Lowe AJ, Newton AC, et al. (1999). Genetic diversity in Mesoamerican populations of mahogany (Swietenia macrophylla), assessed using RAPDs. Heredity 83 (Pt 6): 722-732. http://dx.doi.org/10.1046/j.1365-2540.1999.00626.x PMid:10651917   Guerra MJM, Barreiro ML, Rodriguez ZM and Rubalcada Y (2000). Actividad antimicrobiana de un extracto fluido al 80% de Schinus terebinthifolius Raddi (COPAL). Rev. Cubana Plant Med. 5: 23-25.   Hartl DL and Clark AG (1988). Principles of Population Genetics. Sinauer Associates, Sunderland.   Hook DD and Scholtens JR (1978). Adaptations and Flood Tolerance of Tree Species. In: Plant Life in Anaerobic Environments (Hook DD and Crawford RMM, eds.). Ann Arbor Science Publishers, Michigan, 299-331.   Jordano P and Godoy JA (2000). RAPD variation and population genetic structure in Prunus mahaleb (Rosaceae), an animal-dispersed tree. Mol. Ecol. 9: 1293-1305. http://dx.doi.org/10.1046/j.1365-294x.2000.01009.x PMid:10972769   Justin SHFW and Armstrong W (1991). Evidence for the involvement of ethylene in aerenchyma formation in adventitious roots of rice (Oryza sativa L.). New Phytol. 118: 49-62. http://dx.doi.org/10.1111/j.1469-8137.1991.tb00564.x   Lenzi M and Orth AI (2004). Characterization of the functional reproductive system of the pink-pepper (Schinus terebinthifolius Raddi), in Florianópolis, SC, Brazil. Rev. Bras. Frutic. 26: 198-201. http://dx.doi.org/10.1590/S0100-29452004000200004   Lobo PC and Joly CA (1998). Tolerance to hypoxia and anoxia in Neotropical tree species. Oecol. Bras. 4: 137-156. http://dx.doi.org/10.4257/oeco.1998.0401.07   Lorenzi H (2002). Árvores brasileiras: manual de identificação e cultivo de plantas arbóreas nativas do Brasil. 2nd edn. Instituto Plantarum, Nova Odessa.   Luque R, Sousa HC and Kraus JE (1996). Métodos de coloração de Roeser (1972) - modificado - e Kropp (1972) visando a substituição do azul de astra por azul de alcião 8GS ou 8GX. Acta Bot. Bras. 10: 199-212.   Medri ME, Bianchini E, Pimenta JA, Colli S, et al. (2002). Estudos sobre a Tolerância ao Alagamento em Espécies Arbóreas Nativas da Bacia do Rio Tibagi. In: A Bacia do Rio Tibagi (Medri ME, Bianchini E, Shibatta OA and Pimenta JA, eds.). Edição dos Editores, Londrina, 133-172.   Medri ME, Ferreira AC, Kolb RM, Bianchini E, et al. (2007). Morpho-anatomical alterations in plants of Lithraea molleoides (Vell.) Engl. submitted to flooding. Acta Sci. Biol. Sci. 29: 15-22.   Melo J, Amorim E and Albuquerque U (2009). Native medicinal plants commercialized in Brazil - priorities for conservation. Environ. Monit. Assess. 156: 567-580. http://dx.doi.org/10.1007/s10661-008-0506-0 PMid:18726244   Mielke MS, Almeida AAF, Gomes FP, Mangabeira PAO, et al. (2005). Effects of soil flooding on leaf gas exchange and growth of two Neotropical pioneer tree species. New Forests 29: 161-168. http://dx.doi.org/10.1007/s11056-005-0247-7   Moog PR (1998). Flooding tolerance of Carex species. I. Root structure. Planta 207: 189-198. http://dx.doi.org/10.1007/s004250050472   Moog PR and Janiesch P (1990). Root-growth and morphology of Carex species as influenced by oxygen deficiency. Funct. Ecol. 4: 201-208. http://dx.doi.org/10.2307/2389339   Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. PMid:17248844 PMCid:1213855   Reid DM and Bradford KJ (1984). Effects of Flooding on Hormone Relations. In: Flooding and Plant Growth (Kozlowski TT, ed.). Academic Press, London, 195-219.   Schneider S, Roessll D and Excoffier L (2000). ARLEQUIN: A Software for Population Genetics Data Analysis, Version 2.0. Genetics and Biometry Laboratory, Department of Anthropology, University of Geneva, Geneva.   Statistical Analysis Systems (SAS) (1990). SAS Procedures Guide. SAS Institute Inc., Cary.   Tsukahara H and Kozlowski T (1985). Importance of adventitious roots to growth of flooded Platanus occidentalis seedlings. Plant Soil 88: 123-132. http://dx.doi.org/10.1007/BF02140671   Visser EJW, Voesenek LACJ, Vartapetian BB and Jackson MB (2003). Flooding and plant growth. Ann. Bot. 91: 107-109. http://dx.doi.org/10.1093/aob/mcg014   Voeseneck LACJ and Van der Veen R (1994). The role of phytohormones in plant stress: too much or too little water. Acta Bot. Neerl. 43: 91-127.   Wright S (1951). The genetical structure of populations. Ann. Eugenics 15: 323-354.   Yeh FC, Yang R, Boyle TJ, Ye Z, et al. (2000). PopGene32, Microsoft Windows-based Freeware for Population Genetic Analysis, Version 1.32. Molecular Biology and Biotechnology Centre, University of Alberta, Edmonton.
J. O. Damasceno, Ruas, E. A., Rodrigues, L. A., Ruas, C. F., Bianchini, E., Pimenta, J. A., and Ruas, P. M., Genetic differentiation in Aspidosperma polyneuron (Apocynaceae) over a short geographic distance as assessed by AFLP markers, vol. 10, pp. 1180-1187, 2011.
Aide TM and Rivera E (1998). Geographic patterns of genetic diversity in Poulsenia armata (Moraceae): implications for the theory of Pleistocene refugia and the importance of riparian forest. J. Biogeogr. 25: 695-705. doi:10.1046/j.1365-2699.1998.2540695.x Aizen MA and Feinsinger P (1994). Forest fragmentation, pollination, and plant reproduction in a chaco dry forest, Argentina. Ecology 75: 330-351. doi:10.2307/1939538 Alexander JA, Liston A and Popovich SJ (2004). Genetic diversity of the narrow endemic Astragalus oniciformis (Fabaceae). Am. J. Bot. 91: 2004-2012. doi:10.3732/ajb.91.12.2004 PMid:21652349 Campos JC and Landgraf PRC (2001). Análise da regeneração natural de espécies florestais em matas ciliares de acordo com a distância da margem do lago. Ciênc. Flor. 11: 143-151. Carvalho DA, Oliveira-Filho AT, Van der Berg E, Fontes MAL, et al. (2005). 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C. Medri, Ruas, E. A., Medri, M. E., Ruas, C. F., Sayhun, S., Medri, P. S., Silva, D. C. G., Bianchini, E., and Ruas, P. M., Genetic diversity and flooding survival in Aegiphila sellowiana (Lamiaceae), a typical tree species from upland riparian forests, vol. 10, pp. 1084-1091, 2011.
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