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I. G. Hamoy and Santos, S., Multiplex PCR panel of microsatellite markers for the tambaqui, Colossoma macropomum, developed as a tool for use in conservation and broodstock management, vol. 11. pp. 141-146, 2012.
Batista VS and Miguel P Jr (2003). Caracterização da produção pesqueira desembarcada pela pesca profissional em Manaus, Amazonas, Brasil. Acta Amaz. 33: 53-66. Borrell YJ, Gallego V, García-Fernández C, Mazzeo I, et al. (2011). Assessment of parental contributions to fast- and slow-growing progenies in the sea bream Sparus aurata L. using a new multiplex PCR. Aquaculture 314: 58-65. Chagas EC, Gomes LC, Martins H Jr and Roubach R (2007). Tambaqui productivity reared in cages with different feeding rations. Cienc. Rural 37: 1109-1115. Ciofi C, Tzika AC, Natali C, Watts PC, et al. (2011). Development of a multiplex PCR assay for fine-scale population genetic analysis of the Komodo monitor Varanus komodoensis based on 18 polymorphic microsatellite loci. Mol. Ecol. Resour. 11: 550-556. PMid:21481213 Excoffier L and Lischer HEL (2010). Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Resour. 10: 564-567. PMid:21565059 Guichoux E, Lagache L, Wagner S, Chaumeil P, et al. (2011). Current trends in microsatellite genotyping. Mol. Ecol. Resour. 11: 591-611. PMid:21565126 Hamoy IG, Santos EJ and Santos SE (2008). Rapid and inexpensive analysis of genetic variability in Arapaima gigas by PCR multiplex panel of eight microsatellites. Genet. Mol. Res. 7: 29-32. PMid:18273816 Hamoy IG, Cidade FW, Barbosa MS, Gonçalves EC, et al. (2011). Isolation and characterization of tri and tetranucleotide microsatellite markers for the Tambaqui (Colossoma macropomum, Serrasalmidae, Characiformes). Conserv. Genet. Resour. 3: 33-36. Jackson TR, Martin-Robichaud DJ and Reith ME(2003). Application of DNA markers to the management of Atlantic halibut (Hippoglossus hippoglossus) broodstock. Aquaculture 220: 245-259. Marcuschi M, Esposito TS, Machado MF, Hirata IY, et al. (2010). Purification, characterization and substrate specificity of a trypsin from the Amazonian fish tambaqui (Colossoma macropomum). Biochem. Biophys. Res. Commun. 396: 667-673. PMid:20438707 Na-Nakorn U, Yashiro R, Wachirachaikarn A, Prakoon W, et al. (2010). Novel microsatellites for multiplex PCRs in the Humpback grouper, Cromileptes altivelis (Valenciennes, 1828), and applications for broodstock management. Aquaculture 306: 57-62. Novel P, Porta JM, Porta J, Béjar J, et al. (2010). PCR multiplex tool with 10 microsatellites for the European seabass (Dicentrarchus labrax) - Applications in genetic differentiation of populations and parental assignment. Aquaculture 308 (Suppl 1): S34-S38. Olafsson K, Hjorleifsdottir S, Pampoulie C, Hreggvidsson GO, et al. (2010). Novel set of multiplex assays (SalPrint15) for efficient analysis of 15 microsatellite loci of contemporary samples of the Atlantic salmon (Salmo salar). Mol. Ecol. Resour. 10: 533-537. PMid:21565052 Radwan J, Biedrzycka A and Babik W (2009). Does reduced MHC diversity decrease viability of vertebrate populations? Biol. Cons. 3: 537-544. Rice WR (1989). Analyzing tables of statistical tests. Evolution 43: 223-225. Rozen S and Skaletsky HJ (2000). Primer 3 on the www for General Users and for Biologist Programmers. In: Bioinformatics Methods and Protocols: Methods in Molecular Biology (Krawetz S and Misener S, eds.). Humana Press, Totowa, 365-386. Sambrook J and Russell D (2001). Molecular Cloning: A Laboratory Manual. 3rd edn. Cold Spring Harbor Laboratory Press, New York. Santos MCF, Hrbek T and Farias IP (2009). Microsatellite markers for the tambaqui (Colossoma macropomum, Serrasalmidae, Characiformes), an economically important keystone species of the Amazon River floodplain. Mol. Ecol. Resour. 9: 874-876. PMid:21564774 Skrbinšek T, Jelencic M, Waits L, Kos I, et al. (2010). Highly efficient multiplex PCR of noninvasive DNA does not require pre-amplification. Mol. Ecol. Resour. 10: 495-501. PMid:21565048 Tereba A (1999). Tools for Analysis of Population Statistics. Profile in DNA 14-16. Free Software Distributed by the Authors at Website. Available at []. Accessed February 10, 2011. Vallone PM and Butler JM (2004). AutoDimer: a screening tool for primer-dimer and hairpin structures. Biotechniques 37: 226-231. PMid:15335214 Van Oosterhout C, Hutchinson WF, Wills DPM and Shipley P (2004). Micro-Checker: software for identifying and correcting genotyping errors in microsatellite data. Mol. Ecol. Notes. 4: 535-538.
M. L. Bartholomei-Santos, Roratto, P. A., and Santos, S., High genetic differentiation of Aegla longirostri (Crustacea, Decapoda, Anomura) populations in southern Brazil revealed by multi-loci microsatellite analysis, vol. 10, pp. 4133-4146, 2011.
Abell R (2002). Conservation biology for the biodiversity crisis: a freshwater follow-up. Conserv. Biol. 16: 1437.   Bart JM, Knapp J, Gottstein B, El-Garch F, et al. (2006). EmsB, a tandem repeated multi-loci microsatellite, new tool to investigate the genetic diversity of Echinococcus multilocularis. Infect. Genet. Evol. 6: 390-400. PMid:16504596   Bernstein LB, Manser T and Weiner AM (1985). Human U1 small nuclear RNA genes: extensive conservation of flanking sequences suggests cycles of gene amplification and transposition. Mol. Cell. Biol. 5: 2159-2171. PMid:3837185 PMCid:366940   Bickford D, Lohman DJ, Sodhi NS, Ng PK, et al. (2007). Cryptic species as a window on diversity and conservation. Trends Ecol. Evol. 22: 148-155. PMid:17129636   Bitencourt JVT, Roratto PA, Bartholomei-Santos ML and Santos S (2006). Comparison of different methodologies for DNA extraction from Aegla longirostri (Crustacea, Decapoda, Anomura). Braz. Arch. Biol. Techn. 50: 989-994.   Bond-Buckup G (2003). Família Aeglidae. In: Manual de Identificação dos Crustacea Decapoda de Água Doce do Brasil (Melo GAS, ed.). Edições Loyola, São Paulo, 21-121.   Bond-Buckup G and Buckup L (1994). A família Aeglidae (Crustacea, Decapoda, Anomura). Arq. Zool. 32: 159-346.   Bond-Buckup G, Jara CG, Pérez-Losada M, Buckup L, et al. (2008). Global diversity of crabs (Aeglidae: Anomura: Decapoda) in freshwater. Hydrobiologia 595: 267-273.   Bond-Buckup G, Jara CG, Buckup L and Bueno AAP (2010). Description of a new species of Aeglidae, and new records of related species from river basins in Argentina (Crustacea, Anomura). Zootaxa 2343: 18-30.   Bretagne S, Robert B, Vidaud D, Goossens M, et al. (1991). Structure of the Echinococcus multilocularis U1 snRNA gene repeat. Mol. Biochem. Parasitol. 46: 285-292.   Bretagne S, Assouline B, Vidaud D, Houin R, et al. (1996). Echinococcus multilocularis: microsatellite polymorphism in U1 snRNA genes. Exp. Parasitol. 82: 324-328. PMid:8631384   Brown DT, Morris GF, Chodchoy N, Sprecher C, et al. (1985). Structure of the sea urchin U1 RNA repeat. Nucleic Acids Res. 13: 537-556. PMid:2582356 PMCid:341013   Bueno AAP and Bond-Buckup G (1996). Os estágios juvenis iniciais de Aegla violacea Bond-Buckup & Buckup (Crustacea, Anomura, Aeglidae). Nauplius 4: 39-47.   Cook B, Page T and Hughes J (2008). Importance of cryptic species for identifying 'representative' units of biodiversity for freshwater conservation. Biol. Conserv. 141: 2821-2831.   Denison RA, Van Arsdell SW, Bernstein LB and Weiner AM (1981). Abundant pseudogenes for small nuclear RNAs are dispersed in the human genome. Proc. Natl. Acad. Sci. U. S. A. 78: 810-814. PMid:6165010 PMCid:319892   Excoffier L and Lischer HEL (2010). Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Res. 10: 564-567. PMid:21565059   Feldmann RM (1984). Hamuriaegla glassneri gen. and sp. (Decapoda, Anomura, Aeglidae) from Haumurian (Late Cretaceous) Rock near Cheviot, New Zealand. New Zeal. J. Geol. Geophys. 27: 379-385.   Feldmann RM, Vega FJ, Applegate SP and Bishop GA (1998). Early Cretaceous Arthropods from the Tlayúa Formation at Tepexi de Rodriguez, Puebla, México. J. Paleontol. 72: 79-90.   Frankham R, Ballou JD and Briscoe DA (2004). A Primer of Conservation Genetics. Cambridge University Press, New York. PMid:15477597 PMCid:524053   Hebert PD, Penton EH, Burns JM, Janzen DH, et al. (2004). Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. Proc. Natl. Acad. Sci. U. S. A. 101: 14812-14817. PMid:15465915 PMCid:522015   Jesse R, Schubart CD and Klaus S (2010). Identification of a cryptic lineage within Potamon fluviatile (Herbst) (Crustacea : Brachyura : Potamidae). Invertebr. Syst. 24: 348-356.   Knapp J, Bart JM, Maillard S, Gottstein B, et al. (2010). The genomic Echinococcus microsatellite EmsB sequences: from a molecular marker to the epidemiological tool. Parasitology 137: 439-449. PMid:20025824   Leese F and Held C (2008). Identification and characterization of microsatellites from the Antarctic isopod Ceratoserolis trilobitoides: nuclear evidence for cryptic species. Conserv. Genet. 9: 1369-1372.   Maillard S, Gottstein B, Haag K, Ma S, et al. (2009). The EmsB tandemly repeated multilocus microsatellite: a new tool to investigate genetic diversity of Echinococcus granulosus Sensu Lato. J. Clin. Microbiol. 47: 3608-3616. PMid:19741078 PMCid:2772617   Marzluff WF, Brown DT, Lobo S and Wang SS (1983). Isolation and characterization of two linked mouse U1b small nuclear RNA genes. Nucleic Acids Res. 11: 6255-6270. PMid:6194507 PMCid:326371   Mathews LM, Adams L, Anderson E, Basile M, et al. (2008). Genetic and morphological evidence for substantial hidden biodiversity in a freshwater crayfish species complex. Mol. Phylogenet. Evol. 48: 126-135. PMid:18346914   McLaughlin PA, Lemaitre R and Crandall KA (2010). Annotated checklist of anomuran decapod crustaceans of the world (exclusive of the Kiwaoidea and families Chirostylidae and Galatheidae of the Galatheoidea). Part III - Aegloidea. Raffles Bull. Zool. 23: 131-137.   Meglécz E, Petenian F, Danchin E, D'Acier AC, et al. (2004). High similarity between flanking regions of different microsatellites detected within each of two species of Lepidoptera: Parnassius apollo and Euphydryas aurinia. Mol. Ecol. 13: 1693-1700. PMid:15140111   Munoz JEG, Rodriguez A, Raso JEG and Cuesta JA (2009). Genetic evidence for cryptic speciation in the freshwater shrimp genus Atyaephyra de Brito Capello (Crustacea, Decapoda, Atyidae). Zootaxa 2025: 32-42.   Oliveira EJ, Pádua JG, Zucchi MI, Vencovsky R, et al. (2006). Origin, evolution and genome distribution of microsatellites. Genet. Mol. Biol. 29: 294-307.   Pérez-Losada M, Bond-Buckup G, Jara CG and Crandall KA (2004). Molecular systematics and biogeography of the southern South american freshwater "crabs" Aegla (decapoda: Anomura: Aeglidae) using multiple heuristic tree search approaches. Syst. Biol. 53: 767-780. PMid:15545254   Pérez-Losada M, Bond-Buckup G, Jara CG and Crandall KA (2009). Conservation assessment of Southern South American freshwater ecoregions on the basis of the distribution and genetic diversity of crabs from the genus Aegla. Conserv. Biol. 23: 692-702. PMid:19236451   Pritchard JK, Stephens M and Donnelly P (2000). Inference of population structure using multilocus genotype data. Genetics 155: 945-959. PMid:10835412 PMCid:1461096   Rohlf FJ (1994). NTSYS-pc. Numerical Taxonomy and Multivariate Analysis System. Version 1.80. Exeter Software. Setauket, New York. PMid:7516983   Roratto PA, Bartholomei-Santos ML, Gutierrez AM, Kamenetzky L, et al. (2006). Detection of genetic polymorphism among and within Echinococcus granulosus strains by heteroduplex analysis of a microsatellite from the U1 snRNA genes. Genet. Mol. Res. 5: 542-552. PMid:17117370   Rudolph EH and Crandall KA (2007). A new species of burrowing crayfish Virilastacus retamali (Decapoda: Parastacidae) from the southern Chile peatland. J. Crustacean Biol. 27: 502-512.   Russello MA, Stahala C, Lalonde D, Schmidt KL, et al. (2010). Cryptic diversity and conservation units in the Bahama parrot. Conserv. Genet. 11: 1809-1821.   Santos S, Bond-Buckup G, Peréz-Losada M and Bartholomei-Santos ML (2009). Aegla manuinflata, a new species of freshwater anomuran (Decapoda: Anomura: Aeglidae) from Brazil, determined by morphological and molecular characters. Zootaxa 2088: 31-40.   Silk N (2005). The Global Challenge of Freshwater Biodiversity Conservation. In: A Practitioner's Guide to Freshwater Biodiversity Conservation (Silk N and Ciruna K, eds.). Island Press, Washington, 1-9.   Tero N, Neumeier H, Gudavalli R and Schlotterer C (2006). Silene tatarica microsatellites are frequently located in repetitive DNA. J. Evol. Biol. 19: 1612-1619. PMid:16910990