Publications

Found 4 results
Filters: Author is R.P.V. Brondani  [Clear All Filters]
2010
S. G. C. A. Gondim, Resende, L. V., Brondani, R. P. V., Collevatti, R. G., Silva-Júnior, N. J., Pereira, R. R., and Telles, M. P. C., Development of microsatellite markers for Hoplias malabaricus (Erythrinidae), vol. 9. pp. 1513-1517, 2010.
Batista JS, Farias IP, Formiga-Aquino K, Sousa ACB, et al. (2009). DNA microsatellite markers for "dourada" (Brachyplatystoma rousseauxii, Siluriformes: Pimelodidae), a migratory catfish of utmost importance for fisheries in the Amazon: development, characterization and inter-specific amplification. Conserv. Genet. Res. DOI: 10.1007/ s12686-009-9117-5.   Bertollo LAC, Born GG, Dergam JA, Fenocchio AS, et al. (2000). A biodiversity approach in the Neotropical Erythrinidae fish, Hoplias malabaricus. Karyotypic survey, geographic distribution of cytotypes and cytotaxonomic considerations. Chrom. Res. 8: 603-613. http://dx.doi.org/10.1023/A:1009233907558 PMid:11117356   Born GG and Bertollo LA (2000). Comparative cytogenetics among allopatric populations of the fish, Hoplias malabaricus. Cytotypes with 2n = 42 chromosomes. Genetica 110: 1-9. http://dx.doi.org/10.1023/A:1017572030350 PMid:11519871   Brandström M and Ellegren H (2008). Genome-wide analysis of microsatellite polymorphism in chicken circumventing the ascertainment bias. Genome Res. 18: 881-887. http://dx.doi.org/10.1101/gr.075242.107 PMid:18356314 PMCid:2413155   Carvalho-Costa LF, Hatanaka T and Galetti PM Jr (2006). Isolation and characterization of polymorphic microsatellite markers in the migratory fish Prochilodus costatus. Mol. Ecol. Res. 8: 818-819.   Chakraborty R, Kimmel M, Stivers DN, Davison LJ, et al. (1997). Relative mutation rates at di-, tri-, and tetranucleotide microsatellite loci. Proc. Natl. Acad. Sci. U. S. A. 94: 1041-1046. http://dx.doi.org/10.1073/pnas.94.3.1041 PMid:9023379 PMCid:19636   Creste S, Tulmann Neto A and Figueira A (2001). Detection of single sequence repeat polymorphisms in denaturing polyacrylamide sequencing gels by silver staining. Plant. Mol. Biol. Res. 19: 299-306. http://dx.doi.org/10.1007/BF02772828   Ellegren H (2000). Heterogeneous mutation processes in human microsatellite DNA sequences. Nat. Genet. 24: 400-402. http://dx.doi.org/10.1038/74249 PMid:10742106   Ellegren H (2004). Microsatellites: simple sequences with complex evolution. Nat. Rev. Genet. 5: 435-445. http://dx.doi.org/10.1038/nrg1348 PMid:15153996   Goudet J (2002). FSTAT: a program to estimate and test gene diversities and fixation indices.Version 2.9.3.2. Available at [http://www.unil.ch/izea/softwares/fstat.html]. Accessed February 16, 2010._   Goudet J, Raymond M, de Meeus T and Rousset F (1996). Testing differentiation in diploid populations. Genetics 144: 1933-1940. PMid:8978076 PMCid:1207740   Martins WS, Soares Lucas DC, de Souza Neves KF and Bertioli DJ (2009). WebSat - A web software for microsatellite marker development. Bioinformation 3: 282-283. http://dx.doi.org/10.6026/97320630003282 PMid:19255650 PMCid:2646864   Morelli KA, Revaldaves E, Oliveira C and Foresti F (2007). Isolation and characterization of eight microsatellite loci in Leporinus macrocephalus (Characiformes: Anostomidae) and cross-species amplification. Mol. Ecol. Notes Res. 7: 32-34. http://dx.doi.org/10.1111/j.1471-8286.2006.01484.x   Morgante M and Olivieri AM (1993). PCR-amplified microsatellites as markers in plant genetics. Plant J. 3: 175-182. http://dx.doi.org/10.1111/j.1365-313X.1993.tb00020.x PMid:8401603   Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. PMid:17248844 PMCid:1213855   Paetkau D, Calvert W, Stirling I and Strobeck C (1995). Microsatellite analysis of population structure in Canadian polar bears. Mol. Ecol. 4: 347-354. http://dx.doi.org/10.1111/j.1365-294X.1995.tb00227.x PMid:7663752   Revaldaves E, Pereira LHG, Foresti F and Oliveira C (2005). Isolation and characterization of microsatellite loci in Pseudoplatystoma corruscans (Siluriformes: Pimelodidae) and cross-species amplification. Mol. Ecol. Notes Res. 5: 463-465. http://dx.doi.org/10.1111/j.1471-8286.2005.00883.x   Sambrook J and Russell DW (2001). Molecular Cloning: a Laboratory Manual. 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.   Taramino G and Tingey S (1996). Simple sequence repeats for germplasm analysis and mapping in maize. Genome 39: 277-287. http://dx.doi.org/10.1139/g96-038 PMid:8984002   Wagner HW and Sefc KM (1999). IDENTITY, 1.0. Centre for Applied Genetics. University of Agricultural Sciences, Vienna.   Weber JL (1990). Informativeness of human (dC-dA)n (dG-dT)n polymorphisms. Genomics 7: 524-530. http://dx.doi.org/10.1016/0888-7543(90)90195-Z   Weir BS (1996). Genetic Data Analysis II - Methods for Discrete Population Genetic Data. Sinauer Associates, Sunderland.   Weir BS and Cockerham CC (1984). Estimating F-statistics for the analysis of population structure. Evolution Res. 38: 1358-1370. http://dx.doi.org/10.2307/2408641
M. P. C. Telles, Resende, L. V., Brondani, R. P. V., Collevatti, R. G., Costa, M. C., and Júnior, N. J. Silva, Isolation and characterization of microsatellite markers in the armored catfish Hypostomus gymnorhynchus (Loricariidae), vol. 9. pp. 1770-1774, 2010.
Batista JS, Farias IP, Formiga-Aquino K, Sousa ACB, et al. (2009). DNA microsatellite markers for "dourada" (Brachyplatystoma rousseauxii, Siluriformes: Pimelodidae), a migratory catfish of utmost importance for fisheries in the Amazon: development, characterization and inter-specific amplification. Conserv. Genet. Res. DOI: 10.1007/ s12686-009-9117-5 (online).   Brandström M and Ellegren H (2008). Genome-wide analysis of microsatellite polymorphism in chicken circumventing the ascertainment bias. Genome Res. 18: 881-887. http://dx.doi.org/10.1101/gr.075242.107 PMid:18356314 PMCid:2413155   Carvalho-Costa LF, Hatanaka T and Galetti PM Jr (2006). Isolation and characterization of polymorphic microsatellite markers in the migratory fish Prochilodus costatus. Mol. Ecol. Notes 6: 818-819. http://dx.doi.org/10.1111/j.1471-8286.2006.01356.x   Chakraborty R, Kimmel M, Stivers DN, Davison LJ, et al. (1997). Relative mutation rates at di-, tri-, and tetranucleotide microsatellite loci. Proc. Natl. Acad. Sci U. S. A. 94: 1041-1046. http://dx.doi.org/10.1073/pnas.94.3.1041 PMid:9023379 PMCid:19636   Covain R and Fisch-Muller S (2007). The genera of the Neotropical armored catfish subfamily Loricariinae (Siluriformes: Loricariidae): a practical key and synopsis. Zootaxa 1462: 1-40.   Creste S, Tulmann Neto A and Figueira A (2001). Detection of single sequence repeat polymorphisms in denaturing polyacrylamide sequencing gels by silver staining. Plant Mol. Biol. Rep. 19: 299-306. http://dx.doi.org/10.1007/BF02772828   Ellegren H (2000). Heterogeneous mutation processes in human microsatellite DNA sequences. Nat. Genet. 24: 400-402. http://dx.doi.org/10.1038/74249 PMid:10742106   Ellegren H (2004). Microsatellites: simple sequences with complex evolution. Nat. Rev. Genet. 5: 435-445. http://dx.doi.org/10.1038/nrg1348 PMid:15153996   Goudet J (2002). FSTAT: a program to estimate and test gene diversities and fixation indices.Version 2.9.3.2. Available at [http://www.unil.ch/izea/softwares/fstat.html]. Accessed June 10, 2010.   Goudet J, Raymond M, de Meeus T and Rousset F (1996). Testing differentiation in diploid populations. Genetics 144: 1933-1940. PMid:8978076 PMCid:1207740   Martins W, de Sousa D, Proite K, Guimaraes P, et al. (2006). New softwares for automated microsatellite marker development. Nucleic Acids Res. 34: e31. http://dx.doi.org/10.1093/nar/gnj030 PMid:16493138 PMCid:1380257   Morelli KA, Revaldaves E, Oliveira C and Foresti F (2007). Isolation and characterization of eight microsatellite loci in Leporinus macrocephalus (Characiformes: Anostomidae) and cross-species amplification. Mol. Ecol. Notes 7: 32-34. http://dx.doi.org/10.1111/j.1471-8286.2006.01484.x   Morgante M and Olivieri AM (1993). PCR-amplified microsatellites as markers in plant genetics. Plant J. 3: 175-182. http://dx.doi.org/10.1111/j.1365-313X.1993.tb00020.x PMid:8401603   Nei M (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590. PMid:17248844 PMCid:1213855   Paetkau D, Calvert W, Stirling I and Strobeck C (1995). Microsatellite analysis of population structure in Canadian polar bears. Mol. Ecol. 4: 347-354. http://dx.doi.org/10.1111/j.1365-294X.1995.tb00227.x PMid:7663752   Paiva S, Renesto E and Zawadzki CH (2005). Genetic structure of Hypostomus (Teleostei, Loricariidae) from the Ribeirão Maringá, a stream of the upper Rio Paraná basin, Brazil. Genet. Mol. Biol. 28: 370-375. http://dx.doi.org/10.1590/S1415-47572005000300005   Revaldaves E, Pereira LHG, Foresti F and Oliveira C (2005). Isolation and characterization of microsatellite loci in Pseudoplatystoma corruscans (Siluriformes: Pimelodidae) and cross-species amplification. Mol. Ecol. Notes 5: 463-465. http://dx.doi.org/10.1111/j.1471-8286.2005.00883.x   Sambrook J and Russell DW (2001). Molecular Cloning: a Laboratory Manual. 3rd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.   Taramino G and Tingey S (1996). Simple sequence repeats for germplasm analysis and mapping in maize. Genome 39: 277-287. http://dx.doi.org/10.1139/g96-038 PMid:8984002   Wagner HW and Sefc KM (1999). IDENTITY, 1.0. Centre for Applied Genetics. University of Agricultural Sciences, Vienna.   Weber RP (1990). Basic Content Analysis. 2nd edn. Sage Publications, Newbury Park.   Weir BS (1996). Genetic Data Analysis. II - Methods for Discrete Population Genetic Data. Sinauer Associates, Sunderland.   Weir BS and Cockerham CC (1984). Estimating F-statistics for the analysis of population structure. Evolution 38: 1358- 1370. http://dx.doi.org/10.2307/2408641