Transcriptome

De novo assembly and characterization of farmed blue fox (Alopex lagopus) global transcriptome using Illumina paired-end sequencing

P. C. Guo, Yan, S. Q., Si, S., Bai, C. Y., Zhao, Y., Zhang, Y., Yao, J. Y., Li, Y. M., Guo, P. C., Yan, S. Q., Si, S., Bai, C. Y., Zhao, Y., Zhang, Y., Yao, J. Y., Li, Y. M., Guo, P. C., Yan, S. Q., Si, S., Bai, C. Y., Zhao, Y., Zhang, Y., Yao, J. Y., and Li, Y. M., De novo assembly and characterization of farmed blue fox (Alopex lagopus) global transcriptome using Illumina paired-end sequencing, vol. 15, p. -, 2016.

The blue fox (Alopex lagopus), a coat-color variant of the Arctic fox, is a domesticated fur-bearing mammal. In the present study, transcriptome data generated from a pool of nine different tissues were obtained with Illumina HiSeq2500 paired-end sequencing technology. After filtering from raw reads, 32,358,290 clean reads were assembled into 161,269 transcripts and 97,252 unigenes by the Trinity fragment assembly software.

Transcriptome analysis and anthocyanin-related genes in red leaf lettuce

Y. Z. Zhang, Xu, S. Z., Cheng, Y. W., Ya, H. Y., Han, J. M., Zhang, Y. Z., Xu, S. Z., Cheng, Y. W., Ya, H. Y., Han, J. M., Zhang, Y. Z., Xu, S. Z., Cheng, Y. W., Ya, H. Y., and Han, J. M., Transcriptome analysis and anthocyanin-related genes in red leaf lettuce, vol. 15, p. -, 2016.

This study aimed to analyze the transcriptome profile of red lettuce and identify the genes involved in anthocyanin accumulation. Red leaf lettuce is a popular vegetable and popular due to its high anthocyanin content. However, there is limited information available about the genes involved in anthocyanin biosynthesis in this species. In this study, transcriptomes of 15-day-old seedlings and 40-day-old red lettuce leaves were analyzed using an Illuminia HiseqTM 2500 platform.

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