SSR

Population structure of rice varieties used in Turkish rice breeding programs determined using simple-sequence repeat and inter-primer binding site-retrotransposon data

G. Cömertpay, Baloch, F. S., Derya, M., Andeden, E. E., Alsaleh, A., Sürek, H., Özkan, H., Cömertpay, G., Baloch, F. S., Derya, M., Andeden, E. E., Alsaleh, A., Sürek, H., and Özkan, H., Population structure of rice varieties used in Turkish rice breeding programs determined using simple-sequence repeat and inter-primer binding site-retrotransposon data, vol. 15, p. -, 2016.

Effective breeding programs based on genetic diversity are needed to broaden the genetic basis of rice (Oryza sativa L.) in Turkey. In this study, 81 commercial varieties from seven countries were studied in order to estimate the genomic relationships among them using nine inter-primer binding site (iPBS)-retrotransposon and 17 simple-sequence repeat (SSR) markers. A total of 59 alleles for the SSR markers and 96 bands for the iPBS-retrotransposon markers were detected, with an average of 3.47 and 10.6 per locus, respectively.

Pages

Subscribe to SSR