Phylogeny

Genome-wide comparison of AP2/ERF superfamily genes between Gossypium arboreum and G. raimondii

Z. P. Lei, He, D. H., Xing, H. Y., Tang, B. S., Lu, B. X., Lei, Z. P., He, D. H., Xing, H. Y., Tang, B. S., and Lu, B. X., Genome-wide comparison of AP2/ERF superfamily genes between Gossypium arboreum and G. raimondii, vol. 15, p. -, 2016.

The APETALA2/ethylene response factor (AP2/ERF) transcription factor superfamily is known to regulate diverse processes of plant development and stress responses. We conducted a genome-wide analysis of the AP2/ERF gene in Gossypium arboreum and G. raimondii. Using RPSBLAST and HMMsearch, a total of 271 and 269 AP2/ERF genes were identified in the G. arboreum and G. raimondii genomes, respectively. A phylogenetic analysis classified diploid Gossypium spp AP2/ERF genes into 4 families and 16 subfamilies.

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