Phylogenetic relationship

Phylogenetic relationships of twenty Gymnothorax species based on cytochrome b sequence data

M. Du, Yin, S. W., Niu, B. Z., Du, M., Yin, S. W., and Niu, B. Z., Phylogenetic relationships of twenty Gymnothorax species based on cytochrome b sequence data, vol. 15, p. -, 2016.

To study the phylogenetic relationships of the genus Gymnothorax (moray eels) distributed in South China Sea, polymerase chain reactions were performed, and the amplification products were sequenced by cloning into the PMD18T-vector (TaKaRa). The entire gene sequences encoding cytochrome b (1140 bp) for 16 Gymnothorax (G. flavimarginatus, G. meleagris, G. undulates, G. reticularis, G. reevesi, G. melanospilus, G. rueppeliae, G.

High polymorphism at microsatellite loci in the Chinese donkey

R. F. Zhang, Xie, W. M., Zhang, T., Lei, C. Z., Zhang, R. F., Xie, W. M., Zhang, T., and Lei, C. Z., High polymorphism at microsatellite loci in the Chinese donkey, vol. 15, p. -, 2016.

To reveal the genetic diversity and phylogenetic relationships between Chinese donkey breeds, 415 individuals representing ten breeds were investigated using ten microsatellite markers. The observed number of alleles, mean effective number of alleles (NE), mean expected heterozygosity (HE), and polymorphic information content (PIC) of each breed and polymorphic locus were analyzed. The results showed that seven (HTG7, HTG10, AHT4, HTG6, HMS6, HMS3, and HMS7) of ten microsatellite loci were polymorphic.

Complete mitochondrial genome sequence and gene organization of Chinese indigenous chickens with phylogenetic considerations

F. P. Zhao, Fan, H. Y., Li, G. H., Zhang, B. K., Zhao, F. P., Fan, H. Y., Li, G. H., and Zhang, B. K., Complete mitochondrial genome sequence and gene organization of Chinese indigenous chickens with phylogenetic considerations, vol. 15, p. -, 2016.

In this study, we sequenced the complete mitochondrial DNA of Chinese indigenous Jinhu Black-bone and Rugao chickens. The two chicken mitochondrial genomes were deposited in GenBank under accession Nos. KP742951 and KR347464, respectively. The complete mitochondrial genomes of Jinhu Black-bone and Rugao chickens were sequenced and found to span 16,785 and 16,786 bp, respectively, and consisted of 22 tRNA genes, two rRNA genes (12S rRNA and 16S rRNA), 13 protein-coding genes, and one control region (D-loop).

Complete mitochondrial genome of the Liuyang black goat and its phylogenetic relationship with other Caprinae

S. Chen, Ma, H. M., Chen, G. S., Wang, L. Y., Chen, S., Ma, H. M., Chen, G. S., and Wang, L. Y., Complete mitochondrial genome of the Liuyang black goat and its phylogenetic relationship with other Caprinae, vol. 15, p. -, 2016.

In this study, the complete mitochondrial genome sequence of the Liuyang black goat was investigated, and phylogenetic relationships between the Liuyang black goat and other species of Caprinae were analyzed. The total length of the mitochondrial genome was 16,715 bp, which consisted of 33.50% A, 27.27% T, 25.98% C, and 13.25% G. The mitochondrial genome contained a major non-coding control region (D-loop region), two ribosomal RNA genes, 13 protein-coding genes, and 22 transfer RNA genes.

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