High-throughput sequencing

Leaf transcriptome analysis and development of SSR markers in water chestnut (Eleocharis dulcis)

H. B. Liu, You, Y. N., Zhu, Z. X., Zheng, X. F., Huang, J. B., Hu, Z. L., and Diao, Y., Leaf transcriptome analysis and development of SSR markers in water chestnut (Eleocharis dulcis), vol. 14, pp. 8314-8325, 2015.

Water chestnut (Eleocharis dulcis) is an important aquatic crop in China; however, transcriptomic and genomic data in public databases are limited. To identify genes and development molecular markers, high-throughput transcriptome sequencing was applied to generate transcript sequences from water chestnut leaf. More than 24 million reads were obtained, trimmed, and assembled into 40,796 contigs with an average length of 616.6 bp.

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