Flooding

Reference genes for quantitative real-time polymerase chain reaction studies in soybean plants under hypoxic conditions

T. J. Nakayama, Rodrigues, F. A., Neumaier, N., Marcelino-Guimarães, F. C., Farias, J. R. B., de Oliveira, M. C. N., Borém, A., de Oliveira, A. C. B., Emygdio, B. M., and Nepomuceno, A. L., Reference genes for quantitative real-time polymerase chain reaction studies in soybean plants under hypoxic conditions, vol. 13, pp. 860-871, 2014.

Quantitative real-time polymerase chain reaction (RT-qPCR) is a powerful tool used to measure gene expression. However, because of its high sensitivity, the method is strongly influenced by the quality and concentration of the template cDNA and by the amplification efficiency. Relative quantification is an effective strategy for correcting random and systematic errors by using the expression level of reference gene(s) to normalize the expression level of the genes of interest.

Anatomy and genetic diversity of two populations of Schinus terebinthifolius (Anacardiaceae) from the Tibagi River basin in Paraná, Brazil

E. A. Ruas, Ruas, C. F., Medri, P. S., Medri, C., Medri, M. E., Bianchini, E., Pimenta, J. A., Rodrigues, L. A., and Ruas, P. M., Anatomy and genetic diversity of two populations of Schinus terebinthifolius (Anacardiaceae) from the Tibagi River basin in Paraná, Brazil, vol. 10, pp. 526-536, 2011.

Knowledge of the effects of flooding on plant survival is relevant for the efficiency of management and conservation programs. Schinus terebinthifolius is a tree of economic and ecological importance that is common in northeast Brazil. Flooding tolerance and genetic variation were investigated in two riparian populations of S. terebinthifolius distributed along two different ecological regions of the Tibagi River basin.

Genetic diversity and flooding survival in Aegiphila sellowiana (Lamiaceae), a typical tree species from upland riparian forests

C. Medri, Ruas, E. A., Medri, M. E., Ruas, C. F., Sayhun, S., Medri, P. S., Silva, D. C. G., Bianchini, E., and Ruas, P. M., Genetic diversity and flooding survival in Aegiphila sellowiana (Lamiaceae), a typical tree species from upland riparian forests, vol. 10, pp. 1084-1091, 2011.

Saplings of Aegiphila sellowiana were submitted to flooding and analysis of genetic diversity in order to investigate flooding tolerance as well as its genetic determination. This response is important because it means that some lines could be planted in degraded riparian areas. Leaves were sampled from each plant, and they were submitted to different flooding periods. Mortality of saplings was 40, 80, 50, 53.3, 33.3, and 33.3% in flooding for 15, 18, 25, 50, 80 days, and flooding for 50 days followed by re-aeration for 30 days, respectively.

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